FFCP PHASE2:Mm9::chr15:80003945..80003978,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:17309 |HGNC= |MCL_coexpression_id=13 |TSSclassifier=NA |UniProt=uniprot:Q5RKT9 |association_with_transcript=-172bp_...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=17309 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q5RKT9 | ||
|association_with_transcript=-172bp_to_ENSMUST00000044970,NM_010795,uc007wvf.1_5end | |association_with_transcript=-172bp_to_ENSMUST00000044970,NM_010795,uc007wvf.1_5end | ||
|cluster_id=chr15:80003945..80003978,+ | |cluster_id=chr15:80003945..80003978,+ |
Latest revision as of 03:33, 27 September 2015
Short description: | p3@Mgat3 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mgat3_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -172bp_to_ENSMUST00000044970, NM_010795, uc007wvf.1_5end |
EntrezGene: | Mgat3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@Mgat3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.44e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.44e-17 | 23 |
neuron | 1.34e-16 | 33 |
neuronal stem cell | 1.34e-16 | 33 |
neuroblast | 1.34e-16 | 33 |
electrically signaling cell | 1.34e-16 | 33 |
ectodermal cell | 4.28e-16 | 44 |
neurectodermal cell | 4.28e-16 | 44 |
neural cell | 8.55e-16 | 43 |
electrically responsive cell | 2.84e-13 | 39 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.01e-30 | 73 |
nervous system | 5.80e-29 | 75 |
ectoderm-derived structure | 1.18e-24 | 95 |
ectoderm | 1.18e-24 | 95 |
presumptive ectoderm | 1.18e-24 | 95 |
neurectoderm | 1.52e-24 | 64 |
neural plate | 1.52e-24 | 64 |
presumptive neural plate | 1.52e-24 | 64 |
regional part of nervous system | 6.63e-24 | 54 |
neural tube | 2.89e-22 | 52 |
Showing 1 to 10 of 33 entries