FFCP PHASE1:Mm9::chr7:94395298..94395317,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50490 | |EntrezGene=50490 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JHI8,B2RSM1,B5AN18 | |UniProt=Q9JHI8,B2RSM1,B5AN18 | ||
|association_with_transcript=0bp_to_ENSMUST00000043406,NM_015760,uc009ifi.1,uc009ifj.1,uc009ifk.1,uc009ifl.1,uc009ifm.1,uc009ifn.1,uc012fot.1_5end | |association_with_transcript=0bp_to_ENSMUST00000043406,NM_015760,uc009ifi.1,uc009ifj.1,uc009ifk.1,uc009ifl.1,uc009ifm.1,uc009ifn.1,uc012fot.1_5end | ||
|cluster_id=chr7:94395298..94395317,+ | |||
|description=CAGE_peak_1_at_Nox4_5end | |description=CAGE_peak_1_at_Nox4_5end | ||
|id=chr7:94395298..94395317,+ | |id=chr7:94395298..94395317,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!2.49e-08!14;UBERON:0000117!2.49e-08!14;UBERON:0000171!2.49e-08!14;UBERON:0000170!2.49e-08!14;UBERON:0005597!2.49e-08!14;UBERON:0000118!2.49e-08!14;UBERON:0005153!1.15e-07!17;UBERON:0005178!1.69e-07!17;UBERON:0005181!1.69e-07!17;UBERON:0002224!1.69e-07!17;UBERON:0000915!1.69e-07!17;UBERON:0008947!1.69e-07!17;UBERON:0003258!1.69e-07!17;UBERON:0005157!3.22e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.13e-10,14;UBERON:0000117,2.13e-10,14;UBERON:0000171,2.13e-10,14;UBERON:0000170,2.13e-10,14;UBERON:0005597,2.13e-10,14;UBERON:0000118,2.13e-10,14;UBERON:0005157,2.80e-10,20;UBERON:0005178,9.58e-10,17;UBERON:0005181,9.58e-10,17;UBERON:0002224,9.58e-10,17;UBERON:0000915,9.58e-10,17;UBERON:0008947,9.58e-10,17;UBERON:0003258,9.58e-10,17;UBERON:0005153,1.67e-08,17;UBERON:0009569,4.96e-07,66 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5950649725723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709638518536602,0.734187008646726,0,0.218025156380447,0.219686182734472,0.388859798148567,0.699932108126813,0,0,0,0,1.28629718017973,4.01146815914259,2.57836046138721,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0,0,0.285650984403804,0,0,0.287536413054709,0,0,0.127687338085188,0.307213066512487,0.263772575460388,0.274462930807229,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0,0,0,0.226714680320357,0,12.9063581547208,3.39985666853875,15.6513925574967,18.8435161059824,25.9855594516455,21.487996280158,1.02258193546835,2.33807404142582,0.70667914902068,0.704217098883403,1.28326477414318,0,0,1.08245520505607,2.02687892380079,0,33.1133251185274,0.517875767294343,0.593768556259299,0.173485326766136,0.304465478312141,0.922461989024234,0.301445281105245,1.05829836422134,0.251333182659351,0.741584903203122,52.4895665619279,0,0.485300549842228,0.662524555381181,0.969750506270444,0,0,0.209446706813455,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,4.27725328171328,1.99051152976149,0.505445516867349,2.52530227063769,2.99277018814219,1.14951052216736,0.720248519221397,1.35634336052144,1.49680298132921,1.40925092313335,0.749613796477831,3.88055056108524,0.431135985865684,1.13463648100692,2.11141348996739,0.43839146485515,0.556094498451196,2.089512999133,0.411564272815887,2.58744546864041,0,0,0,1.03562886267751,0.938104239924385,1.44049649168812,1.89395788468168,1.18058539048442,0.925602677324269,0.697601834251224,0,0.583826711835847,0.493679549740441,0.820837320395476,1.21603214318784,1.46199987425332,0.658650345873152,2.68412837520744,0,0.205809224758569,0,0.264450566663544,1.06644125267617,2.32236671860439,1.80414445850931,2.21851877085677,3.11329261382818,1.90225626112559,0.474529061544512,1.31759163779209,7.54005626400809,11.5394753783867,13.2575579241002,0,0.432276099749388,0,0.758671603812327,2.39921876480431,3.38123207019241,4.88763186828754,9.11576689687841,13.3959415990508,236.314939233349,363.120964029821,302.065552366805,356.741200897925,12.1545577105731,0.166845105716094,0.196558995113203,0.449724224769707,0,0,0,0.575392274901621,0,0,0,1.11642284300551,0.312037673114561,0.505157755894224,0.538192240565737,1.92977408545347,81.1066504831394,0.189491411770485,3.09633455239849,3.90413697282933,3.28566347603903,11.0554129911598,23.8043640886014,19.1230974900643,27.4285150744772,20.1532867580385,17.8589340896386,37.1969724404725,24.1758974612254,53.2308535579963,0,0,0.983528546038072,1.10374698521893,0.321101179975584,0,0,1.51482556322624,5.04813151066011,3.12350995437311,3.01592756825919,2.62865677747807,1.11399337041197,2.26461224631066,15.7876173653209,10.5212108848072,10.6727700045561,0,0.567760340833074,0.890328018336276,1.79175655288934,1.48473110675282,0,1.45668381692989,0.604647113929502,0.565815239267694,1.18120757152309,1.53717573971964,1.29214146584111,0,0.712994756769443,0.948110273807448,0,0,0,1.08036656418786,0.258717367565509,0.428674070063185,0.354680467284547,0.178368817602071,0.822745103010605,0.608929898229199,26.9872464273267,2.1183207086382,0.220528398054962,3.62749756471256,0.807322133479528,0.663442174209714,0.238744688006273,0.328281799490123,1.1659233465194,0.741701208042039,0.170870880797853,0.206386867963223,0.555583582109135,0.188368457004691,0,0,0,0,0.138199973804424,0,0.949007980743406,0.609958401380546,0.972048067396211,1.46361807210128,1.09181281873089,0.944050424693745,0.41326727862668,0.523511883968059,0,1.24267862617385,0,1.04661582230785,1.48912641411388,1.36115831840833,1.29159823477731,1.85851738039856,1.5256441023948,0.5208175393758,0.419437377702843,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0.389762468933385,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,5.44152920676507,0.221985953374065,0,0.167884616364078,0.772758376128762,9.00875882165674,0.73260649706906,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.830298780673413,0.798049746802062,0.682934423016537,2.43106717068294,1.04806581313991,1.10306105070008,0.888986911206461,2.26638562962784,0.962757628775446,2.27427490587418,2.02783439912192,1.69763707247469,1.87283014939765,1.53660365771686,1.60819313075717,0,0.927074607558844,0.77163688185482,1.23625770240992,1.91358596174717,2.74295401908332,1.4198064492747,1.43061713968393,1.74415699958794,1.2234219453993,1.26921911837515,1.82927972872773,1.57841826862706,1.7654534799962,1.68342681497322,2.01679530811096,0.886540341380071,2.04615521584845,1.08455788830176,0.578719832943424,0.249810577937946,2.10538447600868,3.43793686477277,3.44318997723918,2.8676884485537,0.695603506861264 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.5950649725723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709638518536602,0.734187008646726,0,0.218025156380447,0.219686182734472,0.388859798148567,0.699932108126813,0,0,0,0,1.28629718017973,4.01146815914259,2.57836046138721,0.202316460859598,0,0,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0,0,0.285650984403804,0,0,0.287536413054709,0,0,0.127687338085188,0.307213066512487,0.263772575460388,0.274462930807229,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0,0,0,0.226714680320357,0,12.9063581547208,3.39985666853875,15.6513925574967,18.8435161059824,25.9855594516455,21.487996280158,1.02258193546835,2.33807404142582,0.70667914902068,0.704217098883403,1.28326477414318,0,0,1.08245520505607,2.02687892380079,0,33.1133251185274,0.517875767294343,0.593768556259299,0.173485326766136,0.304465478312141,0.922461989024234,0.301445281105245,1.05829836422134,0.251333182659351,0.741584903203122,52.4895665619279,0,0.485300549842228,0.662524555381181,0.969750506270444,0,0,0.209446706813455,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0.162241263067758,4.27725328171328,1.99051152976149,0.505445516867349,2.52530227063769,2.99277018814219,1.14951052216736,0.720248519221397,1.35634336052144,1.49680298132921,1.40925092313335,0.749613796477831,3.88055056108524,0.431135985865684,1.13463648100692,2.11141348996739,0.43839146485515,0.556094498451196,2.089512999133,0.411564272815887,2.58744546864041,0,0,0,1.03562886267751,0.938104239924385,1.44049649168812,1.89395788468168,1.18058539048442,0.925602677324269,0.697601834251224,0,0.583826711835847,0.493679549740441,0.820837320395476,1.21603214318784,1.46199987425332,0.658650345873152,2.68412837520744,0,0.205809224758569,0,0.264450566663544,1.06644125267617,2.32236671860439,1.80414445850931,2.21851877085677,3.11329261382818,1.90225626112559,0.474529061544512,1.31759163779209,7.54005626400809,11.5394753783867,13.2575579241002,0,0.432276099749388,0,0.758671603812327,2.39921876480431,3.38123207019241,4.88763186828754,9.11576689687841,13.3959415990508,236.314939233349,363.120964029821,302.065552366805,356.741200897925,12.1545577105731,0.166845105716094,0.196558995113203,0.449724224769707,0,0,0,0.575392274901621,0,0,0,1.11642284300551,0.312037673114561,0.505157755894224,0.538192240565737,1.92977408545347,81.1066504831394,0.189491411770485,3.09633455239849,3.90413697282933,3.28566347603903,11.0554129911598,23.8043640886014,19.1230974900643,27.4285150744772,20.1532867580385,17.8589340896386,37.1969724404725,24.1758974612254,53.2308535579963,0,0,0.983528546038072,1.10374698521893,0.321101179975584,0,0,1.51482556322624,5.04813151066011,3.12350995437311,3.01592756825919,2.62865677747807,1.11399337041197,2.26461224631066,15.7876173653209,10.5212108848072,10.6727700045561,0,0.567760340833074,0.890328018336276,1.79175655288934,1.48473110675282,0,1.45668381692989,0.604647113929502,0.565815239267694,1.18120757152309,1.53717573971964,1.29214146584111,0,0.712994756769443,0.948110273807448,0,0,0,1.08036656418786,0.258717367565509,0.428674070063185,0.354680467284547,0.178368817602071,0.822745103010605,0.608929898229199,26.9872464273267,2.1183207086382,0.220528398054962,3.62749756471256,0.807322133479528,0.663442174209714,0.238744688006273,0.328281799490123,1.1659233465194,0.741701208042039,0.170870880797853,0.206386867963223,0.555583582109135,0.188368457004691,0,0,0,0,0.138199973804424,0,0.949007980743406,0.609958401380546,0.972048067396211,1.46361807210128,1.09181281873089,0.944050424693745,0.41326727862668,0.523511883968059,0,1.24267862617385,0,1.04661582230785,1.48912641411388,1.36115831840833,1.29159823477731,1.85851738039856,1.5256441023948,0.5208175393758,0.419437377702843,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0.389762468933385,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,5.44152920676507,0.221985953374065,0,0.167884616364078,0.772758376128762,9.00875882165674,0.73260649706906,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.830298780673413,0.798049746802062,0.682934423016537,2.43106717068294,1.04806581313991,1.10306105070008,0.888986911206461,2.26638562962784,0.962757628775446,2.27427490587418,2.02783439912192,1.69763707247469,1.87283014939765,1.53660365771686,1.60819313075717,0,0.927074607558844,0.77163688185482,1.23625770240992,1.91358596174717,2.74295401908332,1.4198064492747,1.43061713968393,1.74415699958794,1.2234219453993,1.26921911837515,1.82927972872773,1.57841826862706,1.7654534799962,1.68342681497322,2.01679530811096,0.886540341380071,2.04615521584845,1.08455788830176,0.578719832943424,0.249810577937946,2.10538447600868,3.43793686477277,3.44318997723918,2.8676884485537,0.695603506861264 | ||
|short_description=p1@Nox4 | |short_description=p1@Nox4 | ||
}} | }} |
Latest revision as of 05:01, 27 September 2015
Short description: | p1@Nox4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nox4_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000043406, NM_015760, uc009ifi.1, uc009ifj.1, uc009ifk.1, uc009ifl.1, uc009ifm.1, uc009ifn.1, uc012fot.1_5end |
EntrezGene: | Nox4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 2.13e-10 | 14 |
respiratory tube | 2.13e-10 | 14 |
respiration organ | 2.13e-10 | 14 |
pair of lungs | 2.13e-10 | 14 |
lung primordium | 2.13e-10 | 14 |
lung bud | 2.13e-10 | 14 |
epithelial fold | 2.80e-10 | 20 |
thoracic cavity element | 9.58e-10 | 17 |
thoracic segment organ | 9.58e-10 | 17 |
thoracic cavity | 9.58e-10 | 17 |
thoracic segment of trunk | 9.58e-10 | 17 |
respiratory primordium | 9.58e-10 | 17 |
endoderm of foregut | 9.58e-10 | 17 |
epithelial bud | 1.67e-08 | 17 |
subdivision of trunk | 4.96e-07 | 66 |