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FFCP PHASE1:Mm9::chr9:89949367..89949383,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13036
|EntrezGene=13036
|HGNC=
|HGNC=
|MCL_coexpression_id=3728
|MCL_coexpression_id=3728
|TSSclassifier=NA
|UniProt=D7UEQ9,D3YVI3
|UniProt=D7UEQ9,D3YVI3
|association_with_transcript=0bp_to_ENSMUST00000123320,ENSMUST00000143172_5end
|association_with_transcript=0bp_to_ENSMUST00000123320,ENSMUST00000143172_5end
|cluster_id=chr9:89949367..89949383,+
|description=CAGE_peak_1_at_Ctsh_5end
|description=CAGE_peak_1_at_Ctsh_5end
|id=chr9:89949367..89949383,+
|id=chr9:89949367..89949383,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!5.06e-17!66;UBERON:0002100!2.55e-13!98;UBERON:0005177!1.63e-12!85;UBERON:0005172!1.25e-10!49;UBERON:0005173!1.25e-10!49;UBERON:0002417!1.25e-10!49;UBERON:0000916!1.25e-10!49;UBERON:0005256!8.47e-10!47;UBERON:0002365!1.06e-08!25;UBERON:0002330!1.06e-08!25;UBERON:0000466!2.51e-08!79;UBERON:0009854!3.99e-08!23;UBERON:0009856!3.99e-08!23;UBERON:0003104!6.03e-08!131;UBERON:0009142!6.03e-08!131;UBERON:0002107!6.14e-08!22;UBERON:0007499!6.14e-08!22;UBERON:0006925!6.14e-08!22;UBERON:0009497!6.14e-08!22;UBERON:0000015!6.14e-08!22;UBERON:0002423!6.14e-08!22;UBERON:0006235!6.14e-08!22;UBERON:0008835!6.14e-08!22;UBERON:0003894!6.14e-08!22;UBERON:0004161!6.14e-08!22;UBERON:0008836!6.14e-08!22;UBERON:0000926!7.57e-08!193;UBERON:0004120!7.57e-08!193;UBERON:0006603!7.57e-08!193;UBERON:0005178!3.26e-07!17;UBERON:0005181!3.26e-07!17;UBERON:0002224!3.26e-07!17;UBERON:0000915!3.26e-07!17;UBERON:0008947!3.26e-07!17;UBERON:0003258!3.26e-07!17
|ontology_enrichment_uberon=UBERON:0009569!5.06e-17!66;UBERON:0002100!2.55e-13!98;UBERON:0005177!1.63e-12!85;UBERON:0005172!1.25e-10!49;UBERON:0005173!1.25e-10!49;UBERON:0002417!1.25e-10!49;UBERON:0000916!1.25e-10!49;UBERON:0005256!8.47e-10!47;UBERON:0002365!1.06e-08!25;UBERON:0002330!1.06e-08!25;UBERON:0000466!2.51e-08!79;UBERON:0009854!3.99e-08!23;UBERON:0009856!3.99e-08!23;UBERON:0003104!6.03e-08!131;UBERON:0009142!6.03e-08!131;UBERON:0002107!6.14e-08!22;UBERON:0007499!6.14e-08!22;UBERON:0006925!6.14e-08!22;UBERON:0009497!6.14e-08!22;UBERON:0000015!6.14e-08!22;UBERON:0002423!6.14e-08!22;UBERON:0006235!6.14e-08!22;UBERON:0008835!6.14e-08!22;UBERON:0003894!6.14e-08!22;UBERON:0004161!6.14e-08!22;UBERON:0008836!6.14e-08!22;UBERON:0000926!7.57e-08!193;UBERON:0004120!7.57e-08!193;UBERON:0006603!7.57e-08!193;UBERON:0005178!3.26e-07!17;UBERON:0005181!3.26e-07!17;UBERON:0002224!3.26e-07!17;UBERON:0000915!3.26e-07!17;UBERON:0008947!3.26e-07!17;UBERON:0003258!3.26e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0009569,5.02e-17,66;UBERON:0002100,1.01e-16,90;UBERON:0005177,5.62e-15,79;UBERON:0003104,2.75e-11,61;UBERON:0009142,2.75e-11,61;UBERON:0005256,5.24e-11,45;UBERON:0005172,1.25e-10,49;UBERON:0005173,1.25e-10,49;UBERON:0002417,1.25e-10,49;UBERON:0000916,1.25e-10,49;UBERON:0002365,1.06e-08,25;UBERON:0002330,1.06e-08,25;UBERON:0009854,3.98e-08,23;UBERON:0009856,3.98e-08,23;UBERON:0002107,6.12e-08,22;UBERON:0007499,6.12e-08,22;UBERON:0006925,6.12e-08,22;UBERON:0009497,6.12e-08,22;UBERON:0000015,6.12e-08,22;UBERON:0002423,6.12e-08,22;UBERON:0006235,6.12e-08,22;UBERON:0008835,6.12e-08,22;UBERON:0003894,6.12e-08,22;UBERON:0004161,6.12e-08,22;UBERON:0008836,6.12e-08,22;UBERON:0005178,3.25e-07,17;UBERON:0005181,3.25e-07,17;UBERON:0002224,3.25e-07,17;UBERON:0000915,3.25e-07,17;UBERON:0008947,3.25e-07,17;UBERON:0003258,3.25e-07,17;UBERON:0001007,8.86e-07,116;UBERON:0001555,8.86e-07,116;UBERON:0007026,8.86e-07,116
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3.313615228373,34.5517843418919,33.5702780825744,57.7845561170841,2.81846469342095,16.8953697029696,14.8912641411388,14.7782903141476,19.1156538747042,16.3887441726055,18.5424437060291,17.8380007236212,9.43734099831398,5.07326653734613,16.9937703692141,25.2808896502543,10.3389859797984,11.298205288131,11.8227948909793,13.7850555663961,15.4971456729387,15.264822089036,19.0519490055205,13.7314371929481,13.7172251979,16.1321896218945,26.9958329649114,23.0908419936791,26.297302990853,19.272082607293,0,0.0897138566094757,1.17519231454855,117.459273171572,99.8470769400288,145.056086419674,70.7415650960917,23.5738888896621,9.60078132449013,14.7304075682297,12.6037012956667,16.1541991403066,8.90607275701835,10.5755145634558,10.1253375034771,5.40385443869065,4.98456649882625,6.21312374102184,0.518936737920883,6.3843979744165,6.31714341290296,23.0951381214879,9.64220548088719,16.7297592689513,55.7839286782054,53.1570447676347,51.0261543250986,61.9108168821304,67.9324523705843,53.9471336364178,58.151376138797,51.7963482955392,54.3339536320102,47.1530754370243,53.5385585865232,49.5776696591722,69.2304313349555,60.3515572551029,64.1165501960727,57.857112807944,51.0253446487267,51.1619386545796,54.0187843583998,54.3225782664563,56.8905995634323,57.6122668048876,56.6303154737244,53.3085158074852,53.0298531015058,55.3595190950667,47.470801007684,52.0587786384846,56.7145436284556,22.2331414364772,59.6525601535791,66.3951557009242,19.3201215389532,32.4269386105688,40.1131355623329
|phase1_expression=14.2532473923267,502.175611593041,669.303881142008,14.5182821427278,15.0268718983904,225.461862177668,315.844290085151,0.774739940649458,0.281577444303333,0,0.171217968225505,0.0797721589953364,0.171200729931206,0.437102012094987,39.3069518942482,50.011391045287,27.2829132469977,183.598980238494,183.596226598084,162.541236638646,76.8791342965671,0.595745707205312,0,560.613449468097,690.980754574316,565.04425268918,575.928788864683,589.529292628592,13.4916627814025,5.04060259519861,431.265843224568,0,0,0,39.5726719059246,40.8937227581891,37.7713309085383,130.581868789915,143.765703392379,157.580646936113,162.940122184591,142.756506356315,178.182299562433,83.97317758971,62.5495665624405,33.405508893426,46.1610893165343,2.8343270329458,17.1355222532888,25.6647466778054,50.8150710500066,12.9377307928474,209.560474966113,1.45072428402269,2.35265659399725,44.5058824342188,25.7880095944881,35.5813743671435,0.606949382578793,2.11596391708813,3.80298842103708,27.7852516296688,35.5717918444456,165.131598121137,222.494931577569,196.80299184007,123.435245533583,137.934371610438,1.76272340924412,3.10513658162888,1.26194976810829,14.8538511889978,22.7494597180162,1.34739879136449,1.34183659425531,0,7.70811166995721,8.17198963745201,5.83704826373725,1.84640802822271,2.56165402086747,0.52091337055676,8.93385596804419,9.00420176050688,12.3766580699216,9.42811473515737,7.97281412474976,2.98239113320481,1.59025005999687,3.70300644523249,164.643029582553,253.825043709509,285.587960157255,296.297052209162,398.962720312869,318.099089839108,110.108425383293,36.6425193542824,34.8113246167844,36.393976174565,2.53518155598025,17.9657068380045,5.09610479413291,7.11066703153331,141.585140821334,136.054247760128,149.129711279361,170.704900179995,223.722331471156,124.839838953518,28.2781082628801,94.0798327984516,95.2442003667522,120.427389801545,104.30118322937,86.5842814261464,596.481457143044,48.5853839250903,91.9994974027869,30.2504009401655,39.5306318044104,43.1538975290348,63.3731988141615,4.09893115816166,7.54008144528438,61.8206073604791,21.2072770375479,28.1954283566902,31.6404865411931,8.08869452786043,11.4375150704657,3.14135880282161,7.82209440865244,12.5300574091862,10.389402227978,13.9527486238272,25.2561622348784,103.257785606377,156.182664712011,21.2546274445339,4.03373373184381,7.12696523743766,9.00310649026746,20.3451504078215,12.858898339601,16.2704424761759,17.0537138698706,36.9945820156792,0.862271971731369,2.83659120251729,3.34307135911503,7.23345917010997,6.67313398141435,24.7259038230738,31.0731025975995,9.95171334092466,59.688120921625,47.6093628162223,53.4227378863714,6.00664740352955,12.4298811789981,10.9837857491219,12.5474709860161,18.6926020160034,16.8151153047242,11.8592311822708,23.8763327245661,20.4339349142547,24.6839774870221,24.4609521477852,29.2658402460539,38.0119967305864,40.6167713288444,57.1719343919184,10.0939175310781,11.4224119741006,38.6589976091044,23.2716498663919,7.03851226766272,7.89604684325491,9.14958975386863,11.0925938542838,15.3440850252961,40.3278327358625,41.758557415917,118.418548446564,115.865531256924,146.431963422287,131.795722892525,37.7504151634773,39.1209870273197,49.3870357670831,20.863469104839,21.8214659084582,25.9227792048085,38.2864496349191,52.1732190480913,66.1380781565704,109.778628447711,175.213245651788,198.603390719339,215.20465387962,421.259183090839,6.50695912292767,11.596980711679,23.6105218004096,47.2664082835212,66.3237189319146,128.331429297836,155.068218085987,141.868323428156,238.593868060443,148.081252723175,325.62332920994,328.575669789632,327.594804697404,250.438789276589,387.884591176147,264.566568318578,6.44270800019648,22.4891667489996,60.7687407075174,207.935559983613,505.868897474284,926.465850328365,864.051792714333,234.718729574118,234.088176958755,171.573331075456,263.656073377622,291.664934371498,541.855373446342,25.6345182696763,54.390568381871,108.188140064188,134.933068943014,14.7706542788769,14.8858841972098,0,29.5390984829116,2.2085575359138,1.95219372148319,1.50796378412959,0.955875191810208,0.445597348164788,1.41538265394416,0.404810701674894,2.04579100537918,0.790575555893047,11.5675673911851,59.0470754466397,26.3537093427538,21.1753047159649,79.3506291497896,15.9294166007955,15.0523994416088,21.7672961014621,26.0275010063139,33.3691138955273,29.2063390546731,29.7192537143454,34.535704300363,28.5197902707777,25.9150141507369,16.8669773719998,31.9720184069379,8.17055053809091,3.6012218806262,5.17434735131018,6.21577401591618,10.4630737848941,19.6205699362278,20.404078554663,24.0527309800533,22.9978273902436,34.5286275508027,24.6991805821557,92.6660741531118,43.9183240612863,30.2770883139342,58.1343315295275,81.7421680730405,39.0584321084,18.17167959703,78.7714760478101,37.3560231013433,21.2973706475168,34.8481645458678,43.7421528707281,59.9398813801089,8.15896463970505,8.53703859174314,11.4705978257672,44.8695190467103,2.84702394223022,10.3692928234693,17.7128758947754,31.3632444021703,49.13157684289,38.7060674124435,73.313615228373,34.5517843418919,33.5702780825744,57.7845561170841,2.81846469342095,16.8953697029696,14.8912641411388,14.7782903141476,19.1156538747042,16.3887441726055,18.5424437060291,17.8380007236212,9.43734099831398,5.07326653734613,16.9937703692141,25.2808896502543,10.3389859797984,11.298205288131,11.8227948909793,13.7850555663961,15.4971456729387,15.264822089036,19.0519490055205,13.7314371929481,13.7172251979,16.1321896218945,26.9958329649114,23.0908419936791,26.297302990853,19.272082607293,0,0.0897138566094757,1.17519231454855,117.459273171572,99.8470769400288,145.056086419674,70.7415650960917,23.5738888896621,9.60078132449013,14.7304075682297,12.6037012956667,16.1541991403066,8.90607275701835,10.5755145634558,10.1253375034771,5.40385443869065,4.98456649882625,6.21312374102184,0.518936737920883,6.3843979744165,6.31714341290296,23.0951381214879,9.64220548088719,16.7297592689513,55.7839286782054,53.1570447676347,51.0261543250986,61.9108168821304,67.9324523705843,53.9471336364178,58.151376138797,51.7963482955392,54.3339536320102,47.1530754370243,53.5385585865232,49.5776696591722,69.2304313349555,60.3515572551029,64.1165501960727,57.857112807944,51.0253446487267,51.1619386545796,54.0187843583998,54.3225782664563,56.8905995634323,57.6122668048876,56.6303154737244,53.3085158074852,53.0298531015058,55.3595190950667,47.470801007684,52.0587786384846,56.7145436284556,22.2331414364772,59.6525601535791,66.3951557009242,19.3201215389532,32.4269386105688,40.1131355623329
|short_description=p1@Ctsh
|short_description=p1@Ctsh
}}
}}

Latest revision as of 06:00, 27 September 2015

Short description:p1@Ctsh
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ctsh_5end
Coexpression cluster:MCL_coexpression_mm9:3728
Association with transcript: 0bp_to_ENSMUST00000123320, ENSMUST00000143172_5end
EntrezGene:Ctsh
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ctsh

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G714.25
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5502.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6669.30
CD326+ enterocyte, pool1.CNhs13542.11848-124I314.52
CD326+ enterocyte, pool2.CNhs13197.11849-124I415.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7225.46
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8315.84
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A139.31
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A350.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A527.28
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2183.60
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4183.60
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6162.54
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A376.88
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1560.61
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2690.98
GP2+ M cell, pool1.CNhs13228.11845-124H9565.04
GP2+ M cell, pool2.CNhs13231.11846-124I1575.93
GP2+ M cell, pool3.CNhs13240.11847-124I2589.53
Ileum epithelium, pool1.CNhs13199.10252-104B913.49
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8431.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F539.57
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F640.89
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F737.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8130.58
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1143.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3157.58
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9162.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2142.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4178.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D883.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D962.55
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B333.41
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B746.16
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B817.14
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C325.66
Mouse Astrocytes, donor2.CNhs12078.11552-120C450.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C412.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2209.56
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C144.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E125.79
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C535.58
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C627.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D135.57
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7165.13
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7222.49
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2196.80
Mouse Microglia, donor1.CNhs12629.11718-123C8123.44
Mouse Microglia, donor2.CNhs12634.11736-123E8137.93
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.76
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.85
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.43
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F93.70
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3164.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7253.83
Mouse hepatocyte, donor1.CNhs13078.11714-123C4285.59
Mouse hepatocyte, donor3.CNhs12615.11637-122C8296.30
Mouse hepatocyte, donor6.CNhs13090.11822-124F4398.96
Mouse hepatocyte, donor8.CNhs13091.11824-124F6318.10
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7110.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I736.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E334.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I836.39
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H117.97
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1141.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2136.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3149.13
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6170.70
accessory axillary lymph node, adult.CNhs10475.1063-29H9223.72
adrenal gland, adult.CNhs10508.49-24D7124.84
adrenal gland, embryo E14.CNhs11038.406-44C528.28
adrenal gland, embryo E16.CNhs11004.1254-43D694.08
adrenal gland, embryo E17.CNhs11043.1263-45I195.24
adrenal gland, embryo E18.CNhs11026.1262-18F5120.43
adrenal gland, neonate N00.CNhs11191.1311-23C1104.30
adrenal gland, neonate N25.CNhs11223.1377-27I386.58
amnion, adult pregnant day17.5.CNhs10488.583-22A8596.48
aorta, adult.CNhs10498.46-23H148.59
bone (os femoris), adult.CNhs10483.56-12G292.00
bone (os femoris), neonate N02.CNhs11227.1985-43F530.25
bone (os femoris), neonate N16.CNhs11225.1525-43A639.53
bone (os femoris), neonate N20.CNhs11195.1350-25C343.15
cecum, adult.CNhs10467.37-13H463.37
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I27.54
colon, adult.CNhs10468.36-18H761.82
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C721.21
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D128.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D431.64
corpora quadrigemina, adult.CNhs10501.16-22A48.09
corpus striatum, adult.CNhs10487.19-21D811.44
corpus striatum, neonate N00.CNhs11226.630-43F13.14
cortex, adult.CNhs10473.12-14D57.82
cortex, neonate N30.CNhs11107.1392-42F212.53
diencephalon, adult.CNhs10482.20-12F210.39
diencephalon, neonate N30.CNhs11201.1388-42B213.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.26
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2103.26
epididymis, adult.CNhs10490.58-23B2156.18
eyeball, adult.CNhs10484.31-12G421.25
eyeball, embryo E12.CNhs11016.345-16C64.03
eyeball, embryo E14.CNhs10521.399-16E27.13
eyeball, embryo E15.CNhs10593.426-16C99.00
eyeball, embryo E17.CNhs11023.1261-18D420.35
eyeball, neonate N00.CNhs11207.633-15C612.86
eyeball, neonate N01.CNhs11140.1532-43E716.27
eyeball, neonate N02.CNhs11205.1551-44G817.05
eyeball, neonate N16.CNhs11188.777-19A236.99
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E23.34
forelimb, embryo E14.CNhs10577.413-26A87.23
forelimb, embryo E15.CNhs11007.437-20E76.67
forelimb, embryo E17.CNhs10598.1517-43C424.73
forelimb, embryo E18.CNhs11008.1520-43B531.07
gonad, embryo E13.CNhs11044.1564-45I69.95
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C859.69
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D247.61
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D553.42
heart, embryo E11.CNhs10586.331-24E96.01
heart, embryo E12.CNhs11015.353-12F512.43
heart, embryo E13.CNhs11013.376-3I910.98
heart, embryo E14.CNhs10597.403-26D412.55
heart, embryo E15.CNhs11017.431-16C818.69
heart, embryo E16.CNhs11021.457-17C616.82
heart, embryo E17.CNhs11025.479-18E511.86
heart, embryo E18.CNhs11030.1283-20G323.88
heart, neonate N00.CNhs11213.639-21E320.43
heart, neonate N03.CNhs11221.1349-25I224.68
heart, neonate N10.CNhs11118.749-24G124.46
heart, neonate N16.CNhs11209.782-15G129.27
heart, neonate N20.CNhs11127.821-26I638.01
heart, neonate N25.CNhs11196.1351-25D340.62
heart, neonate N30.CNhs11202.1390-42D257.17
hippocampus, adult.CNhs10478.13-16E810.09
hippocampus, neonate N00.CNhs11228.627-43G111.42
intestinal mucosa, adult.CNhs10506.860-29I338.66
intestine, adult.CNhs10496.178-9A323.27
intestine, embryo E12.CNhs11019.1251-16I57.04
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D89.15
intestine, embryo E16.CNhs10585.463-22H411.09
intestine, embryo E17.CNhs10582.482-18D315.34
intestine, embryo E18.CNhs10526.1289-20F740.33
intestine, neonate N00.CNhs11126.644-26D141.76
intestine, neonate N01.CNhs11192.1322-23E9118.42
intestine, neonate N06.CNhs11102.688-20B8115.87
intestine, neonate N07.CNhs11095.720-20F2146.43
intestine, neonate N10.CNhs11098.755-23A5131.80
intestine, neonate N20.CNhs11187.827-18D137.75
intestine, neonate N25.CNhs11121.1352-25E339.12
intestine, neonate N30.CNhs11131.1384-42G149.39
kidney, embryo E14.CNhs10606.411-4I920.86
kidney, embryo E15.CNhs10997.434-16F821.82
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I238.29
kidney, embryo E18.CNhs11001.1288-20C752.17
kidney, neonate N00.CNhs11214.646-21G766.14
kidney, neonate N10.CNhs11206.758-6D5109.78
kidney, neonate N20.CNhs11113.832-19I1175.21
kidney, neonate N25.CNhs11122.1353-25F3198.60
kidney, neonate N30.CNhs11203.1385-42H1215.20
liver, adult pregnant day01.CNhs10466.508-5B2421.26
liver, embryo E12.CNhs10601.355-15F86.51
liver, embryo E13.CNhs10524.378-3H611.60
liver, embryo E14.CNhs10594.409-16E123.61
liver, embryo E15.CNhs10520.433-16D747.27
liver, embryo E16.CNhs10523.462-17F566.32
liver, embryo E17.CNhs10510.481-18A3128.33
liver, embryo E18.CNhs10579.499-43G4155.07
liver, neonate N00.CNhs11117.641-24F4141.87
liver, neonate N03.CNhs11123.1345-25G2238.59
liver, neonate N06.CNhs11101.684-20A8148.08
liver, neonate N07.CNhs11103.716-20H2325.62
liver, neonate N10.CNhs11115.751-24B9328.58
liver, neonate N20.CNhs11220.823-25A3327.59
liver, neonate N25.CNhs11198.1368-26H1250.44
liver, neonate N30.CNhs11106.1382-42D1387.88
lung, adult.CNhs10474.28-22B1264.57
lung, embryo E12.CNhs10522.354-16G26.44
lung, embryo E14.CNhs10604.404-26F822.49
lung, embryo E15.CNhs11020.432-17C560.77
lung, embryo E16.CNhs10998.458-17B6207.94
lung, embryo E17.CNhs10605.480-44A6505.87
lung, embryo E18.CNhs10583.1287-20I6926.47
lung, neonate N00.CNhs11224.640-42C6864.05
lung, neonate N06.CNhs11212.683-20E5234.72
lung, neonate N07.CNhs11111.715-19A3234.09
lung, neonate N10.CNhs11219.750-23E6171.57
lung, neonate N20.CNhs11109.822-18A4263.66
lung, neonate N25.CNhs11119.1359-25C7291.66
lung, neonate N30.CNhs11133.1394-42H2541.86
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A125.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A154.39
mammary gland, adult lactating day02.CNhs10480.595-22B6108.19
mammary gland, adult pregnant day19.CNhs10476.588-5H2134.93
medulla oblongata, adult.CNhs10477.17-12C214.77
medulla oblongata, neonate N30.CNhs11200.1396-42A314.89
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C229.54
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I911.57
ovary, adult.CNhs10507.91-2I759.05
ovary, embryo E18.CNhs11040.505-44H726.35
ovary, neonate N00.CNhs11217.1299-22I421.18
oviduct, adult pregnant day01.CNhs10500.988-6G679.35
pancreas, adult.CNhs10486.34-16E415.93
pancreas, embryo E14.CNhs11012.405-44F415.05
pancreas, embryo E15.CNhs11042.1556-45F221.77
pancreas, embryo E16.CNhs11003.460-26E526.03
pancreas, embryo E17.CNhs10599.1558-45G333.37
pancreas, embryo E18.CNhs10580.1535-43I729.21
pancreas, neonate N00.CNhs11105.645-26G929.72
pancreas, neonate N01.CNhs11138.1531-43D734.54
pancreas, neonate N02.CNhs11139.1539-43D828.52
pancreas, neonate N16.CNhs11136.787-43B625.92
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H531.97
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C75.17
pituitary gland, embryo E14.CNhs11037.398-44A56.22
pituitary gland, embryo E15.CNhs10592.427-16B910.46
pituitary gland, embryo E16.CNhs11036.449-43F619.62
pituitary gland, embryo E17.CNhs11039.1265-44F520.40
pituitary gland, neonate N00.CNhs11190.1308-22E924.05
placenta, adult pregnant day10.CNhs10472.539-13I723.00
placenta, adult pregnant day17.CNhs10464.577-18G334.53
prostate, adult.CNhs10470.859-1F824.70
skin, adult.CNhs10492.30-1C392.67
skin, neonate N00.CNhs11124.650-25G443.92
skin, neonate N03.CNhs11215.662-22H330.28
skin, neonate N06.CNhs11097.693-20I558.13
skin, neonate N10.CNhs11108.762-6C481.74
small intestine, neonate N16.CNhs11114.790-21I139.06
spinal cord, adult.CNhs10505.24-13C918.17
spleen, adult.CNhs10465.25-2G278.77
spleen, embryo E16.CNhs11035.461-43C137.36
spleen, embryo E18.CNhs11011.1271-21F221.30
spleen, neonate N10.CNhs11116.752-24D134.85
spleen, neonate N20.CNhs11112.824-19H143.74
spleen, neonate N25.CNhs11099.1354-25G359.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.47
stomach, adult.CNhs10503.33-1H644.87
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G810.37
stomach, embryo E16.CNhs11022.459-17D417.71
stomach, embryo E17.CNhs11006.1035-18D531.36
stomach, embryo E18.CNhs10999.1286-20C649.13
stomach, neonate N03.CNhs11193.1340-24B838.71
stomach, neonate N07.CNhs11210.718-18A973.31
stomach, neonate N25.CNhs11104.1355-25E434.55
stomach, neonate N30.CNhs11134.1386-42I133.57
submandibular gland, adult.CNhs10469.59-29C157.78
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F516.90
testis, embryo E15.CNhs11034.443-27C514.89
testis, embryo E16.CNhs11033.470-26G514.78
testis, embryo E17.CNhs11029.486-18I519.12
testis, embryo E18.CNhs11027.503-18G516.39
testis, neonate N00.CNhs11189.1300-22B718.54
testis, neonate N07.CNhs11222.726-26I417.84
testis, neonate N10.CNhs11204.763-44D99.44
testis, neonate N20.CNhs11110.839-18H35.07
testis, neonate N30.CNhs11130.1391-42E216.99
thymus, adult.CNhs10471.38-12B525.28
thymus, embryo E14.CNhs11041.402-44I410.34
thymus, embryo E15.CNhs11005.430-45I211.30
thymus, embryo E16.CNhs11002.456-26C511.82
thymus, embryo E17.CNhs10581.478-18C113.79
thymus, embryo E18.CNhs10595.1273-19G415.50
thymus, neonate N02.CNhs11181.1541-43F815.26
thymus, neonate N03.CNhs11137.2104-43C719.05
thymus, neonate N06.CNhs11197.681-26C413.73
thymus, neonate N07.CNhs11211.713-19D313.72
thymus, neonate N10.CNhs11194.748-24E416.13
thymus, neonate N20.CNhs11186.820-7A227.00
thymus, neonate N25.CNhs11125.1362-25G723.09
thymus, neonate N30.CNhs11132.1393-42G226.30
tongue, adult.CNhs10499.32-1B419.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E4117.46
uterus, adult pregnant day19.CNhs10497.590-15F599.85
uterus, adult.CNhs10509.92-27E5145.06
vagina, adult.CNhs10502.89-27D570.74
vesicular gland, adult.CNhs10491.51-27F823.57
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A214.73
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D716.15
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H26.32
whole body, embryo E14.5.CNhs10578.420-27D223.10
whole body, embryo E14.CNhs10519.395-14B19.64
whole body, embryo E16.CNhs10514.453-14F216.73
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G555.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G553.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G551.03
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G561.91
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G567.93
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G553.95
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G558.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G551.80
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G554.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G547.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G553.54
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G549.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G569.23
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G560.35
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G564.12
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G557.86
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G551.03
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G551.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G554.02
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G554.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G556.89
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G557.61
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G556.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G553.31
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G553.03
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G555.36
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G547.47
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G552.06
whole body, embryo E17.5.CNhs10513.490-9F956.71
whole body, embryo E17.CNhs10517.475-3I522.23
whole body, embryo E18.CNhs10516.493-3B359.65
whole body, neonate N00.CNhs10525.657-19C266.40
whole body, neonate N01.CNhs10576.659-23C619.32
whole body, neonate N06.CNhs10515.692-21D132.43
whole body, neonate N10.CNhs10518.761-6B440.11





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of trunk5.02e-1766
trunk1.01e-1690
trunk region element5.62e-1579
mesenchyme2.75e-1161
entire embryonic mesenchyme2.75e-1161
trunk mesenchyme5.24e-1145
abdomen element1.25e-1049
abdominal segment element1.25e-1049
abdominal segment of trunk1.25e-1049
abdomen1.25e-1049
exocrine gland1.06e-0825
exocrine system1.06e-0825
digestive tract diverticulum3.98e-0823
sac3.98e-0823
liver6.12e-0822
epithelial sac6.12e-0822
digestive gland6.12e-0822
epithelium of foregut-midgut junction6.12e-0822
anatomical boundary6.12e-0822
hepatobiliary system6.12e-0822
foregut-midgut junction6.12e-0822
hepatic diverticulum6.12e-0822
liver primordium6.12e-0822
septum transversum6.12e-0822
liver bud6.12e-0822
thoracic cavity element3.25e-0717
thoracic segment organ3.25e-0717
thoracic cavity3.25e-0717
thoracic segment of trunk3.25e-0717
respiratory primordium3.25e-0717
endoderm of foregut3.25e-0717
digestive system8.86e-07116
digestive tract8.86e-07116
primitive gut8.86e-07116
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