FFCP PHASE1:Mm9::chr11:33478859..33478863,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216643 | |EntrezGene=216643 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1563 | |||
|TSSclassifier=NA | |||
|UniProt=Q8QZW7 | |UniProt=Q8QZW7 | ||
|association_with_transcript=93bp_to_ENSMUST00000020366,NM_146017,uc007ikm.1_5end | |association_with_transcript=93bp_to_ENSMUST00000020366,NM_146017,uc007ikm.1_5end | ||
|cluster_id=chr11:33478859..33478863,- | |||
|description=CAGE_peak_4_at_Gabrp_5end | |description=CAGE_peak_4_at_Gabrp_5end | ||
|id=chr11:33478859..33478863,- | |id=chr11:33478859..33478863,- | ||
|ontology_enrichment_celltype=CL:0000068!1.92e-12!3;CL:0002202!1.92e-12!3;CL:0000069!1.92e-12!3;CL:0002632!1.92e-12!3;CL:0002368!1.92e-12!3;CL:0000307!1.92e-12!3;CL:0000377!1.92e-12!3 | |ontology_enrichment_celltype=CL:0000068!1.92e-12!3;CL:0002202!1.92e-12!3;CL:0000069!1.92e-12!3;CL:0002632!1.92e-12!3;CL:0002368!1.92e-12!3;CL:0000307!1.92e-12!3;CL:0000377!1.92e-12!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,8.97e-44,3;CL:0002202,8.97e-44,3;CL:0000069,8.97e-44,3;CL:0002632,8.97e-44,3;CL:0002368,8.97e-44,3;CL:0000307,8.97e-44,3;CL:0000377,8.97e-44,3;CL:0002076,1.97e-09,15;CL:0000223,3.04e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000474!1.94e-14!9;UBERON:0003975!1.59e-12!5;UBERON:0003126!1.92e-12!3;UBERON:0001005!1.92e-12!3;UBERON:0007196!1.92e-12!3;UBERON:0001558!1.92e-12!3;UBERON:0003100!1.04e-11!11;UBERON:0003134!1.76e-11!8;UBERON:0005795!3.03e-09!4;UBERON:0000995!3.03e-09!4;UBERON:0000014!1.88e-07!5;UBERON:0001003!1.88e-07!5;UBERON:0002097!1.88e-07!5;UBERON:0002199!1.88e-07!5;UBERON:0007029!1.88e-07!5;UBERON:0007376!1.88e-07!5;UBERON:0002416!1.88e-07!5;UBERON:0007383!1.88e-07!5;UBERON:0005178!3.32e-07!17;UBERON:0005181!3.32e-07!17;UBERON:0002224!3.32e-07!17;UBERON:0000915!3.32e-07!17;UBERON:0008947!3.32e-07!17;UBERON:0003258!3.32e-07!17;UBERON:0004175!5.61e-07!9 | |ontology_enrichment_uberon=UBERON:0000474!1.94e-14!9;UBERON:0003975!1.59e-12!5;UBERON:0003126!1.92e-12!3;UBERON:0001005!1.92e-12!3;UBERON:0007196!1.92e-12!3;UBERON:0001558!1.92e-12!3;UBERON:0003100!1.04e-11!11;UBERON:0003134!1.76e-11!8;UBERON:0005795!3.03e-09!4;UBERON:0000995!3.03e-09!4;UBERON:0000014!1.88e-07!5;UBERON:0001003!1.88e-07!5;UBERON:0002097!1.88e-07!5;UBERON:0002199!1.88e-07!5;UBERON:0007029!1.88e-07!5;UBERON:0007376!1.88e-07!5;UBERON:0002416!1.88e-07!5;UBERON:0007383!1.88e-07!5;UBERON:0005178!3.32e-07!17;UBERON:0005181!3.32e-07!17;UBERON:0002224!3.32e-07!17;UBERON:0000915!3.32e-07!17;UBERON:0008947!3.32e-07!17;UBERON:0003258!3.32e-07!17;UBERON:0004175!5.61e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,8.97e-44,3;UBERON:0001005,8.97e-44,3;UBERON:0007196,8.97e-44,3;UBERON:0001558,8.97e-44,3;UBERON:0006834,3.44e-16,1;UBERON:0000014,1.41e-12,5;UBERON:0001003,1.41e-12,5;UBERON:0002097,1.41e-12,5;UBERON:0002199,1.41e-12,5;UBERON:0007029,1.41e-12,5;UBERON:0007376,1.41e-12,5;UBERON:0002416,1.41e-12,5;UBERON:0007383,1.41e-12,5;UBERON:0005178,2.10e-08,17;UBERON:0005181,2.10e-08,17;UBERON:0002224,2.10e-08,17;UBERON:0000915,2.10e-08,17;UBERON:0008947,2.10e-08,17;UBERON:0003258,2.10e-08,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16491041011214,2.02687892380079,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0.361877549568935,1.19372344003136,2.62625439592098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.56596703357246,0.73260649706906,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16491041011214,2.02687892380079,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42366414172764,0,0,0,0.361877549568935,1.19372344003136,2.62625439592098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.56596703357246,0.73260649706906,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0 | ||
|short_description=p4@Gabrp | |short_description=p4@Gabrp | ||
}} | }} |
Latest revision as of 07:48, 27 September 2015
Short description: | p4@Gabrp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gabrp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1563 |
Association with transcript: | 93bp_to_ENSMUST00000020366, NM_146017, uc007ikm.1_5end |
EntrezGene: | Gabrp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 8.97e-44 | 3 |
epithelial cell of tracheobronchial tree | 8.97e-44 | 3 |
branched duct epithelial cell | 8.97e-44 | 3 |
epithelial cell of lower respiratory tract | 8.97e-44 | 3 |
respiratory epithelial cell | 8.97e-44 | 3 |
tracheal epithelial cell | 8.97e-44 | 3 |
tracheoblast | 8.97e-44 | 3 |
endo-epithelial cell | 1.97e-09 | 15 |
endodermal cell | 3.04e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 8.97e-44 | 3 |
respiratory airway | 8.97e-44 | 3 |
tracheobronchial tree | 8.97e-44 | 3 |
lower respiratory tract | 8.97e-44 | 3 |
uterus or analog | 3.44e-16 | 1 |
zone of skin | 1.41e-12 | 5 |
skin epidermis | 1.41e-12 | 5 |
skin of body | 1.41e-12 | 5 |
integument | 1.41e-12 | 5 |
surface | 1.41e-12 | 5 |
outer epithelium | 1.41e-12 | 5 |
integumental system | 1.41e-12 | 5 |
enveloping layer of ectoderm | 1.41e-12 | 5 |
thoracic cavity element | 2.10e-08 | 17 |
thoracic segment organ | 2.10e-08 | 17 |
thoracic cavity | 2.10e-08 | 17 |
thoracic segment of trunk | 2.10e-08 | 17 |
respiratory primordium | 2.10e-08 | 17 |
endoderm of foregut | 2.10e-08 | 17 |