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FFCP PHASE1:Mm9::chr18:52928042..52928071,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=67847
|EntrezGene=67847
|HGNC=
|HGNC=
|MCL_coexpression_id=0
|TSSclassifier=NA
|UniProt=E9Q4E2
|UniProt=E9Q4E2
|association_with_transcript=73bp_to_ENSMUST00000163742_5end
|association_with_transcript=73bp_to_ENSMUST00000163742_5end
|cluster_id=chr18:52928042..52928071,+
|description=CAGE_peak_4_at_Sncaip_5end
|description=CAGE_peak_4_at_Sncaip_5end
|id=chr18:52928042..52928071,+
|id=chr18:52928042..52928071,+
|ontology_enrichment_celltype=CL:0000540!6.34e-10!33;CL:0000047!6.34e-10!33;CL:0000031!6.34e-10!33;CL:0000404!6.34e-10!33;CL:0000117!7.36e-10!23;CL:0000337!7.36e-10!23;CL:0002319!2.52e-07!43;CL:0000221!4.25e-07!44;CL:0000133!4.25e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,2.30e-12,23;CL:0000337,2.30e-12,23;CL:0000540,4.99e-12,33;CL:0000047,4.99e-12,33;CL:0000031,4.99e-12,33;CL:0000404,4.99e-12,33;CL:0000393,1.51e-08,39;CL:0000211,1.51e-08,39;CL:0002319,2.65e-08,43;CL:0000221,7.05e-08,44;CL:0000133,7.05e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.98e-09!73;UBERON:0005743!9.98e-09!73;UBERON:0000073!5.24e-08!75;UBERON:0001016!5.24e-08!75;UBERON:0004121!1.82e-07!102;UBERON:0000924!1.82e-07!102;UBERON:0006601!1.82e-07!102;UBERON:0001049!3.26e-07!52;UBERON:0005068!3.26e-07!52;UBERON:0006241!3.26e-07!52;UBERON:0007135!3.26e-07!52;UBERON:0000468!7.47e-07!333;UBERON:0002346!9.86e-07!71;UBERON:0003075!9.86e-07!71;UBERON:0007284!9.86e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.40e-08,73;UBERON:0002020,7.18e-08,34;UBERON:0001016,2.08e-07,75;UBERON:0000073,5.92e-07,54;UBERON:0001049,7.04e-07,52;UBERON:0005068,7.04e-07,52;UBERON:0006241,7.04e-07,52;UBERON:0007135,7.04e-07,52
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5658874605455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,2.61630187656536,0.219686182734472,0.777719596297134,0.699932108126813,0,0,0,0,0,0.286533439938757,0,2.42779753031517,1.5869729378161,1.90149421051854,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0.898800331555214,1.15265491596466,2.48855069540346,2.43010688997043,2.52389953621658,1.14260393761521,1.54607978666129,2.57230678351403,2.30029130443767,3.67687514644008,0,1.65993539510744,1.84327839907492,2.76961204233407,3.56801810049398,1.56274011167028,1.67509799400829,2.8138130501584,2.75036845998258,2.35702868378934,3.84403538157578,4.10078780815661,0.151452386666368,0,2.89864488701678,0,0,0,0,0,1.54488862144927,0,0,0,0.422530259330042,0,0,0,0,0,0,1.02765491747154,0.776813650941515,0.29688427812965,0.693941307064543,1.21786191324856,0.691846491768175,0.753613202763113,0.940709657085638,0.125666591329675,0.494389935468748,1.44599356919912,0,0.808834249737046,0.662524555381181,0,0,0.878342391034642,0.41889341362691,0,0,0,0,2.24685959107234,0,1.7591609295801,1.04294592115366,1.02286182932132,2.0778804455956,0.648965052271031,2.24046600470696,0.622034853050465,0,0.210441855886474,1.04096354370163,0.919608417733892,1.0803727788321,1.50704817835715,1.02054748726992,0.768682321709099,0.655912071918102,1.29351685369508,0.862271971731369,3.02569728268511,2.63926686245923,0.876782929710299,2.78047249225598,2.089512999133,1.4404749548556,0.398068533636986,0,0.257347907114715,0,0.828503090142008,1.17263029990548,1.80062061461015,0.946978942340841,1.37734962223183,0.617068451549513,0.930135779001631,1.07309360559848,0.817357396570186,0.493679549740441,1.31333971263276,2.26992666728396,1.46199987425332,1.75640092232841,0.268412837520744,0.420579897128254,2.05809224758569,0,0,1.70630600428187,1.62565670302307,1.03093969057675,0.605050573870028,0.444756087689741,0.760902504450237,1.42358718463353,0.823494773620054,0.502670417600539,0.795825888164603,1.16978452271472,0.898819408654221,0.432276099749388,0,2.0863469104839,2.97046132785295,3.38123207019241,3.05476991767971,2.71533482034676,2.17421041659988,1.64414996523069,0.885660887877613,0.784993639206874,0.493588655687202,0,0.500535317148282,0.393117990226406,0.449724224769707,0.202860121388503,0,0.25462585178142,0.863088412352432,0.486405680325106,0,0,0.744281895337007,0,0.252578877947112,0,0,0.184753190166605,0.568474235311454,2.28150967018836,1.18821560042632,1.40814148973101,2.34508760418542,1.42826184531608,0.585400943573396,1.26108115284953,0,0.637819074629948,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,1.12385412991454,0.820481806145422,0,0.757412781613119,0.315508219416257,0,3.44677436372478,2.15071918157297,2.45078541490634,1.69845918473299,1.21443210502468,0.584511715822624,0.395287777946524,0.963963949265421,1.41940085208269,0.712262414669021,1.62886959353576,2.14461159864296,0,1.69946445308487,1.209294227859,0.943025398779491,1.47650946440386,0.307435147943927,0.516856586336442,0,2.49548164869305,0.316036757935816,1.05418608574999,0,0,1.26042765821917,1.16422815404479,1.71469628025274,1.59606210278046,0.535106452806212,0.987294123612726,0.913394847343798,0,0,0.220528398054962,0.65954501176592,1.93757312035087,1.08563264870681,0.835606408021955,0.820704498725306,0.582961673259701,1.48340241608408,0,0.82554747185289,0.740778109478847,0.188368457004691,0,0,0.169978429993855,0,0.276399947608848,0,1.73984796469624,1.01659733563424,1.72808545314882,1.46361807210128,0.655087691238533,0.809186078308924,0.661227645802687,0.26175594198403,0.259229946583586,0,67.6431526421028,1.34564891439581,1.48912641411388,2.72231663681667,1.93739735216597,3.04121025883401,3.63807439801837,0.39061315453185,0.629156066554265,0.724752362478018,35.1396607634596,0,1.01362607645082,0.718976700153791,0.129920822977795,0.716106782669926,0.198681354781265,0,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,1.58711268530648,0,0,0,0,0.375364950902364,3.84618410961257,0.428736758158132,0,1.6942555278512,1.38097570952153,2.86447756719698,0.68741272937475,1.37016503954128,3.0215755895588,0,0,0,0.51776031175182,1.14166082342594,1.59609949360412,2.04880326904961,2.43106717068294,1.04806581313991,0.551530525350042,1.77797382241292,1.85431551515005,0.320919209591815,1.76888048234658,2.02783439912192,0.754505365544305,2.34103768674706,1.79270426733634,1.83793500657962,2.38146845641537,1.73826488917283,2.50781986602817,1.64834360321323,1.17759136107518,1.02860775715625,1.59728225543404,1.1921809497366,2.47088908274958,1.03520318456864,1.35383372626682,0.914639864363863,0.789209134313529,1.90125759384206,1.68342681497322,1.77952527186261,1.18205378850676,2.86461730218783,1.08455788830176,1.54325288784913,1.24905288968973,1.63752125911786,1.07435527024149,2.48674831689496,1.10295709559758,1.62307484934295
|phase1_expression=1.92178616525753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5658874605455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,2.61630187656536,0.219686182734472,0.777719596297134,0.699932108126813,0,0,0,0,0,0.286533439938757,0,2.42779753031517,1.5869729378161,1.90149421051854,0.338844532069132,0.889294796111139,0,0,0.7104801149461,0.898800331555214,1.15265491596466,2.48855069540346,2.43010688997043,2.52389953621658,1.14260393761521,1.54607978666129,2.57230678351403,2.30029130443767,3.67687514644008,0,1.65993539510744,1.84327839907492,2.76961204233407,3.56801810049398,1.56274011167028,1.67509799400829,2.8138130501584,2.75036845998258,2.35702868378934,3.84403538157578,4.10078780815661,0.151452386666368,0,2.89864488701678,0,0,0,0,0,1.54488862144927,0,0,0,0.422530259330042,0,0,0,0,0,0,1.02765491747154,0.776813650941515,0.29688427812965,0.693941307064543,1.21786191324856,0.691846491768175,0.753613202763113,0.940709657085638,0.125666591329675,0.494389935468748,1.44599356919912,0,0.808834249737046,0.662524555381181,0,0,0.878342391034642,0.41889341362691,0,0,0,0,2.24685959107234,0,1.7591609295801,1.04294592115366,1.02286182932132,2.0778804455956,0.648965052271031,2.24046600470696,0.622034853050465,0,0.210441855886474,1.04096354370163,0.919608417733892,1.0803727788321,1.50704817835715,1.02054748726992,0.768682321709099,0.655912071918102,1.29351685369508,0.862271971731369,3.02569728268511,2.63926686245923,0.876782929710299,2.78047249225598,2.089512999133,1.4404749548556,0.398068533636986,0,0.257347907114715,0,0.828503090142008,1.17263029990548,1.80062061461015,0.946978942340841,1.37734962223183,0.617068451549513,0.930135779001631,1.07309360559848,0.817357396570186,0.493679549740441,1.31333971263276,2.26992666728396,1.46199987425332,1.75640092232841,0.268412837520744,0.420579897128254,2.05809224758569,0,0,1.70630600428187,1.62565670302307,1.03093969057675,0.605050573870028,0.444756087689741,0.760902504450237,1.42358718463353,0.823494773620054,0.502670417600539,0.795825888164603,1.16978452271472,0.898819408654221,0.432276099749388,0,2.0863469104839,2.97046132785295,3.38123207019241,3.05476991767971,2.71533482034676,2.17421041659988,1.64414996523069,0.885660887877613,0.784993639206874,0.493588655687202,0,0.500535317148282,0.393117990226406,0.449724224769707,0.202860121388503,0,0.25462585178142,0.863088412352432,0.486405680325106,0,0,0.744281895337007,0,0.252578877947112,0,0,0.184753190166605,0.568474235311454,2.28150967018836,1.18821560042632,1.40814148973101,2.34508760418542,1.42826184531608,0.585400943573396,1.26108115284953,0,0.637819074629948,0.491589944147214,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,1.12385412991454,0.820481806145422,0,0.757412781613119,0.315508219416257,0,3.44677436372478,2.15071918157297,2.45078541490634,1.69845918473299,1.21443210502468,0.584511715822624,0.395287777946524,0.963963949265421,1.41940085208269,0.712262414669021,1.62886959353576,2.14461159864296,0,1.69946445308487,1.209294227859,0.943025398779491,1.47650946440386,0.307435147943927,0.516856586336442,0,2.49548164869305,0.316036757935816,1.05418608574999,0,0,1.26042765821917,1.16422815404479,1.71469628025274,1.59606210278046,0.535106452806212,0.987294123612726,0.913394847343798,0,0,0.220528398054962,0.65954501176592,1.93757312035087,1.08563264870681,0.835606408021955,0.820704498725306,0.582961673259701,1.48340241608408,0,0.82554747185289,0.740778109478847,0.188368457004691,0,0,0.169978429993855,0,0.276399947608848,0,1.73984796469624,1.01659733563424,1.72808545314882,1.46361807210128,0.655087691238533,0.809186078308924,0.661227645802687,0.26175594198403,0.259229946583586,0,67.6431526421028,1.34564891439581,1.48912641411388,2.72231663681667,1.93739735216597,3.04121025883401,3.63807439801837,0.39061315453185,0.629156066554265,0.724752362478018,35.1396607634596,0,1.01362607645082,0.718976700153791,0.129920822977795,0.716106782669926,0.198681354781265,0,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,1.58711268530648,0,0,0,0,0.375364950902364,3.84618410961257,0.428736758158132,0,1.6942555278512,1.38097570952153,2.86447756719698,0.68741272937475,1.37016503954128,3.0215755895588,0,0,0,0.51776031175182,1.14166082342594,1.59609949360412,2.04880326904961,2.43106717068294,1.04806581313991,0.551530525350042,1.77797382241292,1.85431551515005,0.320919209591815,1.76888048234658,2.02783439912192,0.754505365544305,2.34103768674706,1.79270426733634,1.83793500657962,2.38146845641537,1.73826488917283,2.50781986602817,1.64834360321323,1.17759136107518,1.02860775715625,1.59728225543404,1.1921809497366,2.47088908274958,1.03520318456864,1.35383372626682,0.914639864363863,0.789209134313529,1.90125759384206,1.68342681497322,1.77952527186261,1.18205378850676,2.86461730218783,1.08455788830176,1.54325288784913,1.24905288968973,1.63752125911786,1.07435527024149,2.48674831689496,1.10295709559758,1.62307484934295
|short_description=p4@Sncaip
|short_description=p4@Sncaip
}}
}}

Latest revision as of 11:19, 1 October 2015

Short description:p4@Sncaip
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sncaip_5end
Coexpression cluster:MCL_coexpression_mm9:0
Association with transcript: 73bp_to_ENSMUST00000163742_5end
EntrezGene:Sncaip
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Sncaip

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.49
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.57
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.03
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.25
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F22.08
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E22.64
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.38
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F82.97
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C72.72
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D51.64
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.45
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.63
oviduct, adult pregnant day01.CNhs10500.988-6G62.14
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.70
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D82.50
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.94
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G567.64
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C51.49
testis, embryo E16.CNhs11033.470-26G52.72
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G53.04
testis, neonate N00.CNhs11189.1300-22B73.64
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E235.14
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.72
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.51
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.30e-1223
neuroblast (sensu Vertebrata)2.30e-1223
neuron4.99e-1233
neuronal stem cell4.99e-1233
neuroblast4.99e-1233
electrically signaling cell4.99e-1233
electrically responsive cell1.51e-0839
electrically active cell1.51e-0839
neural cell2.65e-0843
ectodermal cell7.05e-0844
neurectodermal cell7.05e-0844

Uber anatomy
Ontology termp-valuen
central nervous system5.40e-0873
gray matter7.18e-0834
nervous system2.08e-0775
regional part of nervous system5.92e-0754
neural tube7.04e-0752
neural rod7.04e-0752
future spinal cord7.04e-0752
neural keel7.04e-0752
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