FFCP PHASE1:Mm9::chr1:65358027..65358031,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=213527 | |EntrezGene=213527 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=Q91V95 | |UniProt=Q91V95 | ||
|association_with_transcript=196bp_to_ENSMUST00000027083,NM_139270,uc007bhu.1_5end | |association_with_transcript=196bp_to_ENSMUST00000027083,NM_139270,uc007bhu.1_5end | ||
|cluster_id=chr1:65358027..65358031,+ | |||
|description=CAGE_peak_1_at_Pth2r_5end | |description=CAGE_peak_1_at_Pth2r_5end | ||
|id=chr1:65358027..65358031,+ | |id=chr1:65358027..65358031,+ | ||
|ontology_enrichment_celltype=CL:0002319!5.26e-20!43;CL:0000540!8.84e-20!33;CL:0000047!8.84e-20!33;CL:0000031!8.84e-20!33;CL:0000404!8.84e-20!33;CL:0000221!2.22e-19!44;CL:0000133!2.22e-19!44;CL:0000107!1.05e-16!9;CL:0000055!3.68e-16!50;CL:0000393!9.44e-16!39;CL:0000211!9.44e-16!39;CL:0002321!1.65e-09!70;CL:0000220!1.65e-09!70;CL:0000117!4.68e-07!23;CL:0000337!4.68e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.30e-78,9;CL:0000540,3.20e-21,33;CL:0000047,3.20e-21,33;CL:0000031,3.20e-21,33;CL:0000404,3.20e-21,33;CL:0000393,6.67e-18,39;CL:0000211,6.67e-18,39;CL:0002319,3.35e-16,43;CL:0000221,7.99e-16,44;CL:0000133,7.99e-16,44;CL:0002321,9.06e-10,70;CL:0000723,2.22e-07,91;CL:0000048,2.22e-07,91;CL:0000034,6.95e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.58e-20!75;UBERON:0001016!5.58e-20!75;UBERON:0004121!1.19e-19!102;UBERON:0000924!1.19e-19!102;UBERON:0006601!1.19e-19!102;UBERON:0001017!1.45e-19!73;UBERON:0005743!1.45e-19!73;UBERON:0002410!1.05e-16!9;UBERON:0000010!1.19e-15!11;UBERON:0002346!7.37e-14!71;UBERON:0003075!7.37e-14!71;UBERON:0007284!7.37e-14!71;UBERON:0000033!6.05e-09!63;UBERON:0003056!1.05e-08!49;UBERON:0001948!1.76e-08!5;UBERON:0002315!1.76e-08!5;UBERON:0002020!3.30e-08!34;UBERON:0001049!3.55e-08!52;UBERON:0005068!3.55e-08!52;UBERON:0006241!3.55e-08!52;UBERON:0007135!3.55e-08!52;UBERON:0002240!5.68e-07!6;UBERON:0005174!5.68e-07!6;UBERON:0001137!5.68e-07!6;UBERON:0000011!8.85e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.30e-78,9;UBERON:0000010,4.15e-64,11;UBERON:0000011,7.38e-28,3;UBERON:0010313,5.70e-27,3;UBERON:0002342,5.70e-27,3;UBERON:0002005,5.70e-27,3;UBERON:0005428,5.70e-27,3;UBERON:0005062,5.70e-27,3;UBERON:0000013,2.34e-26,3;UBERON:0001017,2.40e-09,73;UBERON:0001016,4.41e-09,75;UBERON:0004121,4.82e-07,95;UBERON:0000924,4.82e-07,95;UBERON:0006601,4.82e-07,95 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.571301968807607,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0.589257170947335,0.142371680799103,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0.390361328888111,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2085575359138,1.56175497718655,2.36965737506079,4.06246956519338,3.56477878531831,2.83076530788832,1.21443210502468,1.16902343164525,1.97643888973262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.515559547031063,0.685082519770642,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.571301968807607,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0.589257170947335,0.142371680799103,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0,0,0,0,0.299581278809645,0,0.376963056338593,0,0,0.20778804455956,0.324482526135515,0,0,0,0,0.390361328888111,0,0,0.30140963567143,0.136072998302656,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0,0,0.556094498451196,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,1.1270773567308,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.2085575359138,1.56175497718655,2.36965737506079,4.06246956519338,3.56477878531831,2.83076530788832,1.21443210502468,1.16902343164525,1.97643888973262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.515559547031063,0.685082519770642,0,0,0,0,0,0.103787347584177,0.399024873401031,0.512200817262403,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Pth2r | |short_description=p1@Pth2r | ||
}} | }} |
Latest revision as of 11:49, 1 October 2015
Short description: | p1@Pth2r |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pth2r_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | 196bp_to_ENSMUST00000027083, NM_139270, uc007bhu.1_5end |
EntrezGene: | Pth2r |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.30e-78 | 9 |
neuron | 3.20e-21 | 33 |
neuronal stem cell | 3.20e-21 | 33 |
neuroblast | 3.20e-21 | 33 |
electrically signaling cell | 3.20e-21 | 33 |
electrically responsive cell | 6.67e-18 | 39 |
electrically active cell | 6.67e-18 | 39 |
neural cell | 3.35e-16 | 43 |
ectodermal cell | 7.99e-16 | 44 |
neurectodermal cell | 7.99e-16 | 44 |
embryonic cell | 9.06e-10 | 70 |
somatic stem cell | 2.22e-07 | 91 |
multi fate stem cell | 2.22e-07 | 91 |
stem cell | 6.95e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.30e-78 | 9 |
peripheral nervous system | 4.15e-64 | 11 |
parasympathetic nervous system | 7.38e-28 | 3 |
neural crest-derived structure | 5.70e-27 | 3 |
neural crest | 5.70e-27 | 3 |
enteric nervous system | 5.70e-27 | 3 |
vagal neural crest | 5.70e-27 | 3 |
neural fold | 5.70e-27 | 3 |
sympathetic nervous system | 2.34e-26 | 3 |
central nervous system | 2.40e-09 | 73 |
nervous system | 4.41e-09 | 75 |
ectoderm-derived structure | 4.82e-07 | 95 |
ectoderm | 4.82e-07 | 95 |
presumptive ectoderm | 4.82e-07 | 95 |