Personal tools

FFCP PHASE1:Mm9::chr6:52154414..52154462,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
{{FFCP|EntrezGene=15402|HGNC=|MCL_coexpression_id=1096|UniProt=P09021|association_with_transcript=123bp_to_ENSMUST00000048794,NM_010453,uc009byh.1_5end|description=CAGE_peak_1_at_Hoxa5_5end|id=chr6:52154414..52154462,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!6.45e-12!17;UBERON:0005181!6.45e-12!17;UBERON:0002224!6.45e-12!17;UBERON:0000915!6.45e-12!17;UBERON:0008947!6.45e-12!17;UBERON:0003258!6.45e-12!17;UBERON:0005177!9.15e-12!85;UBERON:0002048!2.43e-10!14;UBERON:0000117!2.43e-10!14;UBERON:0000171!2.43e-10!14;UBERON:0000170!2.43e-10!14;UBERON:0005597!2.43e-10!14;UBERON:0000118!2.43e-10!14;UBERON:0005157!9.04e-10!27;UBERON:0002100!5.02e-09!98;UBERON:0009569!1.17e-08!66;UBERON:0001041!9.62e-08!92;UBERON:0005153!1.60e-07!17;UBERON:0004921!1.75e-07!126;UBERON:0004185!1.75e-07!126;UBERON:0001007!6.43e-07!128;UBERON:0001555!6.43e-07!128;UBERON:0007026!6.43e-07!128;UBERON:0000466!7.40e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.07e-13,17;UBERON:0005181,1.07e-13,17;UBERON:0002224,1.07e-13,17;UBERON:0000915,1.07e-13,17;UBERON:0008947,1.07e-13,17;UBERON:0003258,1.07e-13,17;UBERON:0002048,7.54e-12,14;UBERON:0000117,7.54e-12,14;UBERON:0000171,7.54e-12,14;UBERON:0000170,7.54e-12,14;UBERON:0005597,7.54e-12,14;UBERON:0000118,7.54e-12,14;UBERON:0005157,5.01e-11,20;UBERON:0005153,1.40e-08,17;UBERON:0005177,3.01e-08,79;UBERON:0002100,4.88e-07,90|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.89147186513637,0,0,0,0,0,0.430761996159075,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,2.93993100536592,2.38610777810186,0,0,0,0,0.419959264876088,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0.571301968807607,1.32521124570968,0,0,0,0,0,0,0,0,0,1.95428099300967,0,0.30559649555362,0.589257170947335,0.142371680799103,1.1183966749518,0,0,20.2905142091174,4.30211938490693,0,0,0.649776417447669,0,1.12355536105401,0,0,0,0,0,0,0,8.01016851741492,6.84071636782766,10.6160133453104,0.45673551887624,0.517875767294343,0.593768556259299,4.16364784238726,2.74018930480927,2.07553947530453,1.20578112442098,1.17588707135705,1.0053327306374,0,12.4355446951124,0,0.647067399789637,0.220841518460394,0.969750506270444,0,0,0,0.766371165625774,0,0,0,0,1.83000241127451,0,0,0,0,0,1.32391173005411,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,2.26927296201383,0.527853372491847,3.72632745126877,0,1.0447564995665,0.205782136407943,2.38841120182192,0,0,0,1.44988040774851,3.04883877975425,1.44049649168812,2.60419209143731,0.590292695242212,1.85120535464854,0,1.07309360559848,0,0.329119699826961,0.32833492815819,0.324275238183423,0.292399974850665,0.658650345873152,0.268412837520744,0,0,0,0.793351699990633,13.8637362847902,13.0052536241846,15.5929628199733,14.3195302482573,10.8965241483986,6.27744566171445,2.37264530772256,6.25856027951241,5.27803938480566,3.58121649674071,3.8992817423824,1.79763881730844,1.51296634912286,1.39398891278057,1.70701110857774,2.17072173958485,0,1.01825663922657,0.387904974335251,0.561086559122548,0.69560190836683,1.62371162777562,2.511979645462,1.72756029490521,0.296452627087149,2.33583148002532,1.96558995113203,0.224862112384854,0.811440485554012,0.72353147925725,1.01850340712568,0.575392274901621,0.324270453550071,1.09824565275233,4.31304619582064,1.48856379067401,1.24815069245824,1.01031551178845,1.07638448113147,0.964887042726734,9.23765950833023,25.9603234125564,26.4003261836082,15.6165478913173,21.1221223459652,22.7808510120869,22.6141458841713,16.3912264200551,19.0738524368491,20.3747514476873,16.1049316344062,10.9788420859544,12.0879487306127,14.4649058581512,0,0,0,0.275936746304732,21.0321272884007,15.9407893765396,2.78689407140348,0.504941854408746,92.128400069547,88.2391562110403,79.7066571611356,0,0.222798674082394,0,26.3126956088681,32.7326560860669,34.3900366813475,0,0.283880170416537,1.78065603667255,0.977321756121456,1.31976098378028,2.65490276679926,10.9251286269742,6.04647113929502,3.39489143560617,5.90603785761546,7.07100840271033,5.42699415653264,3.99887102425256,3.92147116223193,2.21225730555071,1.05418608574999,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,1.81374878235628,1.13025098687134,1.38719727334758,2.14870219205646,1.31312719796049,1.7488850197791,5.93360966433631,0.512612642393558,4.33412422722767,2.03713980106683,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0.276399947608848,3.81868247206045,25.9395514736531,11.5892096262304,7.77638453916969,5.43629569637619,5.45906409365444,3.64133735239016,3.71940550764012,2.6175594198403,0.388844919875379,0,0,0.747582730219894,0.330916980914195,0,0.129159823477731,0,0.352071715937262,0.39061315453185,0,0,0,0.632022241256357,1.21635129174099,1.64337531463724,0.909445760844565,1.25318686967237,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0,0,0,0,0.453460767230423,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,6.43481555021895,5.98537310101547,6.4878770186571,4.132814190161,5.03071590307158,3.30918315210025,4.4449345560323,4.94484137373346,4.49286893428541,3.03236654116557,4.30914809813408,4.71565853465191,4.86935838843389,3.13723246783859,4.07791829584854,3.33405583898152,4.1718357340148,2.70072908649187,3.70877310722976,4.12156976376312,3.77156177623957,3.37204031702741,4.76872379894642,3.92435324907287,4.04670335785922,2.5384382367503,4.39027134894654,1.31534855718921,4.34573164306758,1.68342681497322,3.79632057997357,3.64466584789585,2.86461730218783,2.63392630016142,3.66522560864169,4.49659040288303,3.97683734357194,3.22306581072447,3.63447830930802,1.10295709559758,3.01428186306548|short_description=p1@Hoxa5}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=15402
|HGNC=
|MCL_coexpression_id=1096
|TSSclassifier=NA
|UniProt=P09021
|association_with_transcript=123bp_to_ENSMUST00000048794,NM_010453,uc009byh.1_5end
|cluster_id=chr6:52154414..52154462,-
|description=CAGE_peak_1_at_Hoxa5_5end
|id=chr6:52154414..52154462,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005178!6.45e-12!17;UBERON:0005181!6.45e-12!17;UBERON:0002224!6.45e-12!17;UBERON:0000915!6.45e-12!17;UBERON:0008947!6.45e-12!17;UBERON:0003258!6.45e-12!17;UBERON:0005177!9.15e-12!85;UBERON:0002048!2.43e-10!14;UBERON:0000117!2.43e-10!14;UBERON:0000171!2.43e-10!14;UBERON:0000170!2.43e-10!14;UBERON:0005597!2.43e-10!14;UBERON:0000118!2.43e-10!14;UBERON:0005157!9.04e-10!27;UBERON:0002100!5.02e-09!98;UBERON:0009569!1.17e-08!66;UBERON:0001041!9.62e-08!92;UBERON:0005153!1.60e-07!17;UBERON:0004921!1.75e-07!126;UBERON:0004185!1.75e-07!126;UBERON:0001007!6.43e-07!128;UBERON:0001555!6.43e-07!128;UBERON:0007026!6.43e-07!128;UBERON:0000466!7.40e-07!79
|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.07e-13,17;UBERON:0005181,1.07e-13,17;UBERON:0002224,1.07e-13,17;UBERON:0000915,1.07e-13,17;UBERON:0008947,1.07e-13,17;UBERON:0003258,1.07e-13,17;UBERON:0002048,7.54e-12,14;UBERON:0000117,7.54e-12,14;UBERON:0000171,7.54e-12,14;UBERON:0000170,7.54e-12,14;UBERON:0005597,7.54e-12,14;UBERON:0000118,7.54e-12,14;UBERON:0005157,5.01e-11,20;UBERON:0005153,1.40e-08,17;UBERON:0005177,3.01e-08,79;UBERON:0002100,4.88e-07,90
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,2.89147186513637,0,0,0,0,0,0.430761996159075,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,2.93993100536592,2.38610777810186,0,0,0,0,0.419959264876088,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0.571301968807607,1.32521124570968,0,0,0,0,0,0,0,0,0,1.95428099300967,0,0.30559649555362,0.589257170947335,0.142371680799103,1.1183966749518,0,0,20.2905142091174,4.30211938490693,0,0,0.649776417447669,0,1.12355536105401,0,0,0,0,0,0,0,8.01016851741492,6.84071636782766,10.6160133453104,0.45673551887624,0.517875767294343,0.593768556259299,4.16364784238726,2.74018930480927,2.07553947530453,1.20578112442098,1.17588707135705,1.0053327306374,0,12.4355446951124,0,0.647067399789637,0.220841518460394,0.969750506270444,0,0,0,0.766371165625774,0,0,0,0,1.83000241127451,0,0,0,0,0,1.32391173005411,0.248813941220186,0.252722758433675,0,0,0,0,0,0,0,0,0,0,2.26927296201383,0.527853372491847,3.72632745126877,0,1.0447564995665,0.205782136407943,2.38841120182192,0,0,0,1.44988040774851,3.04883877975425,1.44049649168812,2.60419209143731,0.590292695242212,1.85120535464854,0,1.07309360559848,0,0.329119699826961,0.32833492815819,0.324275238183423,0.292399974850665,0.658650345873152,0.268412837520744,0,0,0,0.793351699990633,13.8637362847902,13.0052536241846,15.5929628199733,14.3195302482573,10.8965241483986,6.27744566171445,2.37264530772256,6.25856027951241,5.27803938480566,3.58121649674071,3.8992817423824,1.79763881730844,1.51296634912286,1.39398891278057,1.70701110857774,2.17072173958485,0,1.01825663922657,0.387904974335251,0.561086559122548,0.69560190836683,1.62371162777562,2.511979645462,1.72756029490521,0.296452627087149,2.33583148002532,1.96558995113203,0.224862112384854,0.811440485554012,0.72353147925725,1.01850340712568,0.575392274901621,0.324270453550071,1.09824565275233,4.31304619582064,1.48856379067401,1.24815069245824,1.01031551178845,1.07638448113147,0.964887042726734,9.23765950833023,25.9603234125564,26.4003261836082,15.6165478913173,21.1221223459652,22.7808510120869,22.6141458841713,16.3912264200551,19.0738524368491,20.3747514476873,16.1049316344062,10.9788420859544,12.0879487306127,14.4649058581512,0,0,0,0.275936746304732,21.0321272884007,15.9407893765396,2.78689407140348,0.504941854408746,92.128400069547,88.2391562110403,79.7066571611356,0,0.222798674082394,0,26.3126956088681,32.7326560860669,34.3900366813475,0,0.283880170416537,1.78065603667255,0.977321756121456,1.31976098378028,2.65490276679926,10.9251286269742,6.04647113929502,3.39489143560617,5.90603785761546,7.07100840271033,5.42699415653264,3.99887102425256,3.92147116223193,2.21225730555071,1.05418608574999,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,1.81374878235628,1.13025098687134,1.38719727334758,2.14870219205646,1.31312719796049,1.7488850197791,5.93360966433631,0.512612642393558,4.33412422722767,2.03713980106683,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0.276399947608848,3.81868247206045,25.9395514736531,11.5892096262304,7.77638453916969,5.43629569637619,5.45906409365444,3.64133735239016,3.71940550764012,2.6175594198403,0.388844919875379,0,0,0.747582730219894,0.330916980914195,0,0.129159823477731,0,0.352071715937262,0.39061315453185,0,0,0,0.632022241256357,1.21635129174099,1.64337531463724,0.909445760844565,1.25318686967237,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.0762068066549998,0,0,0,0,0.453460767230423,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,6.43481555021895,5.98537310101547,6.4878770186571,4.132814190161,5.03071590307158,3.30918315210025,4.4449345560323,4.94484137373346,4.49286893428541,3.03236654116557,4.30914809813408,4.71565853465191,4.86935838843389,3.13723246783859,4.07791829584854,3.33405583898152,4.1718357340148,2.70072908649187,3.70877310722976,4.12156976376312,3.77156177623957,3.37204031702741,4.76872379894642,3.92435324907287,4.04670335785922,2.5384382367503,4.39027134894654,1.31534855718921,4.34573164306758,1.68342681497322,3.79632057997357,3.64466584789585,2.86461730218783,2.63392630016142,3.66522560864169,4.49659040288303,3.97683734357194,3.22306581072447,3.63447830930802,1.10295709559758,3.01428186306548
|short_description=p1@Hoxa5
}}

Latest revision as of 13:07, 1 October 2015

Short description:p1@Hoxa5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Hoxa5_5end
Coexpression cluster:MCL_coexpression_mm9:1096
Association with transcript: 123bp_to_ENSMUST00000048794, NM_010453, uc009byh.1_5end
EntrezGene:Hoxa5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Hoxa5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.39
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G320.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.84
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.62
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C54.16
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H112.44
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A83.73
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F53.05
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I513.86
intestine, embryo E13.CNhs11010.381-16D513.01
intestine, embryo E15.CNhs10602.976-16D815.59
intestine, embryo E16.CNhs10585.463-22H414.32
intestine, embryo E17.CNhs10582.482-18D310.90
intestine, embryo E18.CNhs10526.1289-20F76.28
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E96.26
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.51
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F82.17
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B19.24
lung, embryo E12.CNhs10522.354-16G225.96
lung, embryo E14.CNhs10604.404-26F826.40
lung, embryo E15.CNhs11020.432-17C515.62
lung, embryo E16.CNhs10998.458-17B621.12
lung, embryo E17.CNhs10605.480-44A622.78
lung, embryo E18.CNhs10583.1287-20I622.61
lung, neonate N00.CNhs11224.640-42C616.39
lung, neonate N06.CNhs11212.683-20E519.07
lung, neonate N07.CNhs11111.715-19A320.37
lung, neonate N10.CNhs11219.750-23E616.10
lung, neonate N20.CNhs11109.822-18A410.98
lung, neonate N25.CNhs11119.1359-25C712.09
lung, neonate N30.CNhs11133.1394-42H214.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C221.03
medulla oblongata, neonate N30.CNhs11200.1396-42A315.94
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.79
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E192.13
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E288.24
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E379.71
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D426.31
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D532.73
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D634.39
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F410.93
pancreas, embryo E15.CNhs11042.1556-45F26.05
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I77.07
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I52.15
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C95.93
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E325.94
stomach, embryo E15.CNhs10603.1252-16G811.59
stomach, embryo E16.CNhs11022.459-17D47.78
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B83.64
stomach, neonate N07.CNhs11210.718-18A93.72
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I86.43
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D24.13
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F23.31
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.14
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.64
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C63.63
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element1.07e-1317
thoracic segment organ1.07e-1317
thoracic cavity1.07e-1317
thoracic segment of trunk1.07e-1317
respiratory primordium1.07e-1317
endoderm of foregut1.07e-1317
lung7.54e-1214
respiratory tube7.54e-1214
respiration organ7.54e-1214
pair of lungs7.54e-1214
lung primordium7.54e-1214
lung bud7.54e-1214
epithelial fold5.01e-1120
epithelial bud1.40e-0817
trunk region element3.01e-0879
trunk4.88e-0790
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:52154414..52154462,-&oldid=4304483"