FFCP PHASE1:Mm9::chr11:50016461..50016509,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18412 | |EntrezGene=18412 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1969 | |MCL_coexpression_id=1969 | ||
|TSSclassifier=NA | |||
|UniProt=F6VD69 | |UniProt=F6VD69 | ||
|association_with_transcript=-5bp_to_ENSMUST00000136936_5end | |association_with_transcript=-5bp_to_ENSMUST00000136936_5end | ||
|cluster_id=chr11:50016461..50016509,- | |||
|description=CAGE_peak_2_at_Sqstm1_5end | |description=CAGE_peak_2_at_Sqstm1_5end | ||
|id=chr11:50016461..50016509,- | |id=chr11:50016461..50016509,- | ||
|ontology_enrichment_celltype=CL:0000144!2.65e-18!121;CL:0000012!2.65e-18!121;CL:0002371!1.46e-16!118;CL:0000548!6.40e-16!115;CL:0000004!6.40e-16!115;CL:0000255!6.40e-16!115;CL:0000034!2.01e-14!97;CL:0000723!1.20e-11!91;CL:0000048!1.20e-11!91;CL:0000219!1.16e-10!54;CL:0000055!2.01e-10!50;CL:0002321!1.78e-09!70;CL:0000220!1.78e-09!70;CL:0002319!8.29e-08!43;CL:0000221!1.95e-07!44;CL:0000133!1.95e-07!44;CL:0002320!2.05e-07!46;CL:0000134!2.05e-07!46 | |ontology_enrichment_celltype=CL:0000144!2.65e-18!121;CL:0000012!2.65e-18!121;CL:0002371!1.46e-16!118;CL:0000548!6.40e-16!115;CL:0000004!6.40e-16!115;CL:0000255!6.40e-16!115;CL:0000034!2.01e-14!97;CL:0000723!1.20e-11!91;CL:0000048!1.20e-11!91;CL:0000219!1.16e-10!54;CL:0000055!2.01e-10!50;CL:0002321!1.78e-09!70;CL:0000220!1.78e-09!70;CL:0002319!8.29e-08!43;CL:0000221!1.95e-07!44;CL:0000133!1.95e-07!44;CL:0002320!2.05e-07!46;CL:0000134!2.05e-07!46 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.26e-16,97;CL:0000723,4.99e-13,91;CL:0000048,4.99e-13,91;CL:0000219,1.57e-12,54;CL:0002321,1.93e-10,70;CL:0002320,1.53e-08,46;CL:0000134,1.53e-08,46;CL:0002319,8.41e-08,43;CL:0000333,1.67e-07,10;CL:0000095,1.67e-07,10;CL:0000243,1.67e-07,10;CL:0000123,1.67e-07,10;CL:0000125,1.67e-07,10;CL:0000030,1.67e-07,10;CL:0000339,1.67e-07,10;CL:0000221,2.20e-07,44;CL:0000133,2.20e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.35e-10!75;UBERON:0001016!1.35e-10!75;UBERON:0001017!8.53e-10!73;UBERON:0005743!8.53e-10!73;UBERON:0002384!2.05e-07!46;UBERON:0004121!3.67e-07!102;UBERON:0000924!3.67e-07!102;UBERON:0006601!3.67e-07!102 | |ontology_enrichment_uberon=UBERON:0000073!1.35e-10!75;UBERON:0001016!1.35e-10!75;UBERON:0001017!8.53e-10!73;UBERON:0005743!8.53e-10!73;UBERON:0002384!2.05e-07!46;UBERON:0004121!3.67e-07!102;UBERON:0000924!3.67e-07!102;UBERON:0006601!3.67e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.59e-11,75;UBERON:0001017,4.74e-10,73;UBERON:0002384,1.53e-08,46;UBERON:0004121,6.93e-07,95;UBERON:0000924,6.93e-07,95;UBERON:0006601,6.93e-07,95 | |||
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| ||
|short_description=p2@Sqstm1 | |short_description=p2@Sqstm1 | ||
}} | }} |
Latest revision as of 14:51, 1 October 2015
Short description: | p2@Sqstm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sqstm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1969 |
Association with transcript: | -5bp_to_ENSMUST00000136936_5end |
EntrezGene: | Sqstm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.26e-16 | 97 |
somatic stem cell | 4.99e-13 | 91 |
multi fate stem cell | 4.99e-13 | 91 |
motile cell | 1.57e-12 | 54 |
embryonic cell | 1.93e-10 | 70 |
connective tissue cell | 1.53e-08 | 46 |
mesenchymal cell | 1.53e-08 | 46 |
neural cell | 8.41e-08 | 43 |
migratory neural crest cell | 1.67e-07 | 10 |
neuron associated cell | 1.67e-07 | 10 |
glial cell (sensu Vertebrata) | 1.67e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.67e-07 | 10 |
glial cell | 1.67e-07 | 10 |
glioblast | 1.67e-07 | 10 |
glioblast (sensu Vertebrata) | 1.67e-07 | 10 |
ectodermal cell | 2.20e-07 | 44 |
neurectodermal cell | 2.20e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.59e-11 | 75 |
central nervous system | 4.74e-10 | 73 |
connective tissue | 1.53e-08 | 46 |
ectoderm-derived structure | 6.93e-07 | 95 |
ectoderm | 6.93e-07 | 95 |
presumptive ectoderm | 6.93e-07 | 95 |