FFCP PHASE1:Mm9::chr18:66098752..66098757,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19434 | |EntrezGene=19434 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=133 | |MCL_coexpression_id=133 | ||
|TSSclassifier=NA | |||
|UniProt=O35602 | |UniProt=O35602 | ||
|association_with_transcript=-9bp_to_ENSMUST00000025396,NM_013833,uc008ffl.1_5end | |association_with_transcript=-9bp_to_ENSMUST00000025396,NM_013833,uc008ffl.1_5end | ||
|cluster_id=chr18:66098752..66098757,- | |||
|description=CAGE_peak_3_at_Rax_5end | |description=CAGE_peak_3_at_Rax_5end | ||
|id=chr18:66098752..66098757,- | |id=chr18:66098752..66098757,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!2.04e-28!9;UBERON:0000019!2.04e-28!9;UBERON:0000047!2.04e-28!9;UBERON:0004088!2.04e-28!9;UBERON:0002104!2.04e-28!9;UBERON:0001456!2.04e-28!9;UBERON:0003072!2.04e-28!9;UBERON:0003071!2.04e-28!9;UBERON:0004128!2.04e-28!9;UBERON:0001444!5.95e-23!11;UBERON:0000020!6.69e-21!12;UBERON:0001032!6.69e-21!12;UBERON:0004456!6.69e-21!12;UBERON:0003056!2.25e-19!49;UBERON:0005085!3.63e-19!13;UBERON:0000007!2.71e-18!8;UBERON:0003296!2.71e-18!8;UBERON:0010133!2.71e-18!8;UBERON:0001894!1.91e-14!10;UBERON:0006222!1.91e-14!10;UBERON:0000033!3.67e-14!63;UBERON:0002346!4.16e-12!71;UBERON:0003075!4.16e-12!71;UBERON:0007284!4.16e-12!71;UBERON:0007811!2.74e-09!86;UBERON:0000153!3.73e-08!94;UBERON:0004121!3.81e-08!102;UBERON:0000924!3.81e-08!102;UBERON:0006601!3.81e-08!102 | |ontology_enrichment_uberon=UBERON:0000970!2.04e-28!9;UBERON:0000019!2.04e-28!9;UBERON:0000047!2.04e-28!9;UBERON:0004088!2.04e-28!9;UBERON:0002104!2.04e-28!9;UBERON:0001456!2.04e-28!9;UBERON:0003072!2.04e-28!9;UBERON:0003071!2.04e-28!9;UBERON:0004128!2.04e-28!9;UBERON:0001444!5.95e-23!11;UBERON:0000020!6.69e-21!12;UBERON:0001032!6.69e-21!12;UBERON:0004456!6.69e-21!12;UBERON:0003056!2.25e-19!49;UBERON:0005085!3.63e-19!13;UBERON:0000007!2.71e-18!8;UBERON:0003296!2.71e-18!8;UBERON:0010133!2.71e-18!8;UBERON:0001894!1.91e-14!10;UBERON:0006222!1.91e-14!10;UBERON:0000033!3.67e-14!63;UBERON:0002346!4.16e-12!71;UBERON:0003075!4.16e-12!71;UBERON:0007284!4.16e-12!71;UBERON:0007811!2.74e-09!86;UBERON:0000153!3.73e-08!94;UBERON:0004121!3.81e-08!102;UBERON:0000924!3.81e-08!102;UBERON:0006601!3.81e-08!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,7.50e-57,9;UBERON:0000019,7.50e-57,9;UBERON:0000047,7.50e-57,9;UBERON:0010312,7.50e-57,9;UBERON:0004088,7.50e-57,9;UBERON:0002104,7.50e-57,9;UBERON:0001456,7.50e-57,9;UBERON:0003072,7.50e-57,9;UBERON:0004128,7.50e-57,9;UBERON:0003071,7.50e-57,9;UBERON:0001444,1.76e-46,11;UBERON:0000020,1.37e-42,12;UBERON:0001032,1.37e-42,12;UBERON:0004456,1.37e-42,12;UBERON:0000033,2.70e-39,13;UBERON:0005085,2.70e-39,13;UBERON:0003056,4.47e-19,49;UBERON:0002346,1.88e-14,64;UBERON:0003075,1.88e-14,64;UBERON:0007284,1.88e-14,64;UBERON:0007811,6.05e-14,36;UBERON:0010371,1.39e-12,73;UBERON:0000153,1.36e-11,43;UBERON:0010314,7.96e-10,92;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0000007,2.58e-09,8;UBERON:0003296,2.58e-09,8;UBERON:0010133,2.58e-09,8;UBERON:0001894,1.45e-07,10;UBERON:0006222,1.45e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,5.33493816147085,3.67843367093557,4.68161537493908,4.67184935290717,5.71506592871154,4.48398020996974,4.77878795254617,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,2.71653235943784,0.643011105094777,1.06404140185364,0.356737635204141,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0,0,0,0,0.499621155875892,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,5.33493816147085,3.67843367093557,4.68161537493908,4.67184935290717,5.71506592871154,4.48398020996974,4.77878795254617,2.58703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,2.71653235943784,0.643011105094777,1.06404140185364,0.356737635204141,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0,0.206035057238894,0,0.252697211763798,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0,0,0,0,0.499621155875892,0,0.214871054048298,0,0,0 | ||
|short_description=p3@Rax | |short_description=p3@Rax | ||
}} | }} |
Latest revision as of 15:52, 1 October 2015
Short description: | p3@Rax |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rax_5end |
Coexpression cluster: | MCL_coexpression_mm9:133 |
Association with transcript: | -9bp_to_ENSMUST00000025396, NM_013833, uc008ffl.1_5end |
EntrezGene: | Rax |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 7.50e-57 | 9 |
camera-type eye | 7.50e-57 | 9 |
simple eye | 7.50e-57 | 9 |
immature eye | 7.50e-57 | 9 |
ocular region | 7.50e-57 | 9 |
visual system | 7.50e-57 | 9 |
face | 7.50e-57 | 9 |
optic cup | 7.50e-57 | 9 |
optic vesicle | 7.50e-57 | 9 |
eye primordium | 7.50e-57 | 9 |
subdivision of head | 1.76e-46 | 11 |
sense organ | 1.37e-42 | 12 |
sensory system | 1.37e-42 | 12 |
entire sense organ system | 1.37e-42 | 12 |
head | 2.70e-39 | 13 |
ectodermal placode | 2.70e-39 | 13 |
pre-chordal neural plate | 4.47e-19 | 49 |
neurectoderm | 1.88e-14 | 64 |
neural plate | 1.88e-14 | 64 |
presumptive neural plate | 1.88e-14 | 64 |
craniocervical region | 6.05e-14 | 36 |
ecto-epithelium | 1.39e-12 | 73 |
anterior region of body | 1.36e-11 | 43 |
structure with developmental contribution from neural crest | 7.96e-10 | 92 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
pituitary gland | 2.58e-09 | 8 |
gland of diencephalon | 2.58e-09 | 8 |
neuroendocrine gland | 2.58e-09 | 8 |
diencephalon | 1.45e-07 | 10 |
future diencephalon | 1.45e-07 | 10 |