Personal tools

FFCP PHASE1:Mm9::chr16:14705925..14705951,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20583
|EntrezGene=20583
|HGNC=
|HGNC=
|MCL_coexpression_id=390
|TSSclassifier=NA
|UniProt=P97469,Q3UZ96
|UniProt=P97469,Q3UZ96
|association_with_transcript=0bp_to_ENSMUST00000023356,NM_011415,uc007yhm.1_5end
|association_with_transcript=0bp_to_ENSMUST00000023356,NM_011415,uc007yhm.1_5end
|cluster_id=chr16:14705925..14705951,+
|description=CAGE_peak_1_at_Snai2_5end
|description=CAGE_peak_1_at_Snai2_5end
|id=chr16:14705925..14705951,+
|id=chr16:14705925..14705951,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005178!1.48e-07!17;UBERON:0005181!1.48e-07!17;UBERON:0002224!1.48e-07!17;UBERON:0000915!1.48e-07!17;UBERON:0008947!1.48e-07!17;UBERON:0003258!1.48e-07!17;UBERON:0000926!1.81e-07!193;UBERON:0004120!1.81e-07!193;UBERON:0006603!1.81e-07!193;UBERON:0002048!3.91e-07!14;UBERON:0000117!3.91e-07!14;UBERON:0000171!3.91e-07!14;UBERON:0000170!3.91e-07!14;UBERON:0005597!3.91e-07!14;UBERON:0000118!3.91e-07!14;UBERON:0003102!6.50e-07!23;UBERON:0001048!6.79e-07!147
|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.24e-07,17;UBERON:0005181,1.24e-07,17;UBERON:0002224,1.24e-07,17;UBERON:0000915,1.24e-07,17;UBERON:0008947,1.24e-07,17;UBERON:0003258,1.24e-07,17;UBERON:0001048,3.21e-07,134;UBERON:0002048,3.32e-07,14;UBERON:0000117,3.32e-07,14;UBERON:0000171,3.32e-07,14;UBERON:0000170,3.32e-07,14;UBERON:0005597,3.32e-07,14;UBERON:0000118,3.32e-07,14;UBERON:0003102,5.67e-07,22
|phase1_expression=5.44506080156299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,3.91199134694921,1.39007331681239,0.522399578277871,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0.997407872150954,0.408338712524738,0,0,0,0,0,0,22.2837367816772,21.5932863497566,35.4245231672045,19.559783608701,0.436050312760893,2.19686182734472,2.91644848611425,4.05960622713551,4.31257693094915,0,0,0,16.9791227783725,22.6361417551618,23.2052441524849,0.202316460859598,0,0.633831403506179,22.7025836486319,16.8966011261116,4.49949858640699,4.94433181283487,3.5524005747305,5.09320187881288,1.53687322128622,0.518448061542388,0.540023753326763,0.210324961351382,1.42825492201902,1.32521124570968,0,0,0.919218786610021,0,0.766124028511126,0.768032666281217,0.395658863190582,0.823388792421687,1.56274011167028,1.11673199600552,2.25105044012672,1.22238598221448,4.71405736757868,4.27115042397309,1.67759501242771,1.21161909333094,4.1564358058732,5.2175607966302,6.0229671388697,10.879541339324,9.17495425784289,7.14754059192436,6.2723764193627,4.63466586434781,244.397082576935,170.679405024085,194.336765980687,0.422530259330042,346.481489018658,540.187108178089,291.537348292866,13.6389355837065,15.2015919285059,17.6933555755174,3.53970027129086,10.8753911131812,1.7813056687779,8.50078101154066,6.39377504455497,7.84092690670599,6.93324146542064,7.52567725668511,3.89566433121994,4.20231445148436,7.66376591675532,4.42305275974937,24.5885611920062,12.8088080707028,16.4857586065976,0,0,0.41889341362691,1.02182822083437,0,0,0,0.599162557619291,0,0.251308704225729,1.39059456153821,0.511430914660661,1.45451631191692,0.324482526135515,22.3028206832193,11.8186622079588,3.0326731012041,4.20883711772948,13.0120442962704,8.96618207290544,10.0834792690996,8.43946979880004,5.30684693380357,5.63700369253339,4.96619140166563,2.58703370739016,23.4969112296798,40.4687011559133,46.4510967792825,30.0298153425778,35.5900479008765,32.7357036530837,27.9863705514803,30.253208556411,0.702213187313235,0,0,8.28503090142008,12.4298811789981,11.1638478105829,14.9149183418682,8.26409773339096,12.4956361438776,10.2314935690179,9.92611585178591,8.75740067753771,9.54447129498187,9.85004784474571,7.94474333549386,5.55559952216263,4.61055242111206,4.69722465661301,1.47202963994889,0.823236899034275,0,1.58670339998127,45.0038208629344,52.7177245123195,34.6653470956431,30.2525286935014,21.7930482967973,16.3594038456801,1.89811624617805,5.59976446061637,7.54005626400809,9.94782360205754,8.57841983324129,3.59527763461689,2.59365659849633,2.98711909881551,30.15719625154,31.7610865055046,27.0498565615393,27.4929292591174,28.8989205879762,27.4932413970049,16.2517900409341,7.0852871030209,8.16393384775149,3.94870924549762,4.74324203339438,4.83850806576673,4.12773889737726,1.79889689907883,2.84004169943904,2.894125917029,5.34714288740982,6.90470729881945,3.08056930872567,3.56929837144506,4.31304619582064,7.07067800570156,6.24075346229121,10.6083128737787,8.61107584905178,11.5786445127208,8.68339993783042,45.0989560013754,99.2456706531938,66.2005834523234,68.9989329968196,56.6171150153337,40.2293753097363,31.4165173051056,49.8127055375564,44.9573319987013,47.1986115226162,12.7813385478276,11.9152637487468,11.8612228036839,0,0,9.83528546038072,16.0043312856745,0.642202359951168,0.820481806145422,21.1476079535911,6.81671503451807,2.2085575359138,3.90438744296638,1.93881057959519,3.34556317133573,3.7875774594007,2.83076530788832,4.45291771842384,4.67609372658099,4.34816555741176,0.642642632843614,18.5941511622832,26.531774946421,26.8763482933401,16.9919226661712,0,20.8791347093284,12.6975893925195,8.11001842950362,8.56375489354241,9.83792473420568,6.20227903603731,9.45187696641514,9.62542921638748,1.8962205476149,2.10837217149998,0,2.04263763452273,8.64293251350289,3.23396709456886,7.93047029616891,9.3990323830405,13.1992925025532,14.1512157717824,3.04464949114599,4.92810586933792,0.847328283455281,3.08739757276947,26.0520279647538,32.9387430459647,29.7342719895808,21.009532544552,23.8004304630339,2.91480836629851,1.11255181206306,1.36696704638282,26.6239059672557,15.5563402990558,2.44878994106098,1.91371918809435,2.28778173206523,0,0.139951452323658,0.138199973804424,3.81868247206045,40.6491751751759,48.7966721104437,35.7497678120162,29.4814497380401,20.5260809921407,13.4864346384821,10.4143354213923,4.97336289769656,2.07383957266869,9.32008969630389,0.56369293868419,27.959594110224,19.0277264025662,23.9174961663179,17.1782565225382,20.9505595608565,17.8383002741546,13.020438484395,5.97698263226552,1.44950472495604,2.01621004380506,0.632022241256357,16.015292007923,18.8988161183282,11.8227948909793,11.2786818270513,8.54329825559439,4.80781798079875,2.95379054349154,3.02899349844443,1.752756553065,2.01652370273681,1.94915761479505,2.11666051608725,2.22066114144981,15.1909357022192,0,0.807424709485281,1.51096154727671,5.9888774149979,22.709579529593,21.2455884150028,29.368467933832,1.50471631210609,0,0,0.572895513439397,0.859265911718438,0,0,0,0.45032120322422,0.453142408984205,1.55328093525546,19.9271707361619,29.9268655050773,18.2684958156924,23.0951381214879,19.7036372870303,16.1782287436012,12.6680634846921,9.68364769022803,12.194929964489,13.6456494352451,18.7574681918777,12.449338531481,16.1063392848198,18.2471684353877,19.7003658517754,14.2888107384922,19.9321040625151,17.3618298417335,18.9559514369521,12.3647092912894,11.6575545811041,15.262919329703,15.4983523465759,13.3718703301742,13.1753132581463,16.4152339309852,12.6220301282213,12.1012067261408,14.2594319538155,8.97827634652382,15.5411873742668,18.5188426866059,15.1415485972785,20.1417893541756,20.0622875420387,10.2422336954558,14.2698281151699,14.6112316752843,23.7197531765366,18.5296792060393,14.3758058084661
|phase1_expression=5.44506080156299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,3.91199134694921,1.39007331681239,0.522399578277871,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0.288851619751275,0.997407872150954,0.408338712524738,0,0,0,0,0,0,22.2837367816772,21.5932863497566,35.4245231672045,19.559783608701,0.436050312760893,2.19686182734472,2.91644848611425,4.05960622713551,4.31257693094915,0,0,0,16.9791227783725,22.6361417551618,23.2052441524849,0.202316460859598,0,0.633831403506179,22.7025836486319,16.8966011261116,4.49949858640699,4.94433181283487,3.5524005747305,5.09320187881288,1.53687322128622,0.518448061542388,0.540023753326763,0.210324961351382,1.42825492201902,1.32521124570968,0,0,0.919218786610021,0,0.766124028511126,0.768032666281217,0.395658863190582,0.823388792421687,1.56274011167028,1.11673199600552,2.25105044012672,1.22238598221448,4.71405736757868,4.27115042397309,1.67759501242771,1.21161909333094,4.1564358058732,5.2175607966302,6.0229671388697,10.879541339324,9.17495425784289,7.14754059192436,6.2723764193627,4.63466586434781,244.397082576935,170.679405024085,194.336765980687,0.422530259330042,346.481489018658,540.187108178089,291.537348292866,13.6389355837065,15.2015919285059,17.6933555755174,3.53970027129086,10.8753911131812,1.7813056687779,8.50078101154066,6.39377504455497,7.84092690670599,6.93324146542064,7.52567725668511,3.89566433121994,4.20231445148436,7.66376591675532,4.42305275974937,24.5885611920062,12.8088080707028,16.4857586065976,0,0,0.41889341362691,1.02182822083437,0,0,0,0.599162557619291,0,0.251308704225729,1.39059456153821,0.511430914660661,1.45451631191692,0.324482526135515,22.3028206832193,11.8186622079588,3.0326731012041,4.20883711772948,13.0120442962704,8.96618207290544,10.0834792690996,8.43946979880004,5.30684693380357,5.63700369253339,4.96619140166563,2.58703370739016,23.4969112296798,40.4687011559133,46.4510967792825,30.0298153425778,35.5900479008765,32.7357036530837,27.9863705514803,30.253208556411,0.702213187313235,0,0,8.28503090142008,12.4298811789981,11.1638478105829,14.9149183418682,8.26409773339096,12.4956361438776,10.2314935690179,9.92611585178591,8.75740067753771,9.54447129498187,9.85004784474571,7.94474333549386,5.55559952216263,4.61055242111206,4.69722465661301,1.47202963994889,0.823236899034275,0,1.58670339998127,45.0038208629344,52.7177245123195,34.6653470956431,30.2525286935014,21.7930482967973,16.3594038456801,1.89811624617805,5.59976446061637,7.54005626400809,9.94782360205754,8.57841983324129,3.59527763461689,2.59365659849633,2.98711909881551,30.15719625154,31.7610865055046,27.0498565615393,27.4929292591174,28.8989205879762,27.4932413970049,16.2517900409341,7.0852871030209,8.16393384775149,3.94870924549762,4.74324203339438,4.83850806576673,4.12773889737726,1.79889689907883,2.84004169943904,2.894125917029,5.34714288740982,6.90470729881945,3.08056930872567,3.56929837144506,4.31304619582064,7.07067800570156,6.24075346229121,10.6083128737787,8.61107584905178,11.5786445127208,8.68339993783042,45.0989560013754,99.2456706531938,66.2005834523234,68.9989329968196,56.6171150153337,40.2293753097363,31.4165173051056,49.8127055375564,44.9573319987013,47.1986115226162,12.7813385478276,11.9152637487468,11.8612228036839,0,0,9.83528546038072,16.0043312856745,0.642202359951168,0.820481806145422,21.1476079535911,6.81671503451807,2.2085575359138,3.90438744296638,1.93881057959519,3.34556317133573,3.7875774594007,2.83076530788832,4.45291771842384,4.67609372658099,4.34816555741176,0.642642632843614,18.5941511622832,26.531774946421,26.8763482933401,16.9919226661712,0,20.8791347093284,12.6975893925195,8.11001842950362,8.56375489354241,9.83792473420568,6.20227903603731,9.45187696641514,9.62542921638748,1.8962205476149,2.10837217149998,0,2.04263763452273,8.64293251350289,3.23396709456886,7.93047029616891,9.3990323830405,13.1992925025532,14.1512157717824,3.04464949114599,4.92810586933792,0.847328283455281,3.08739757276947,26.0520279647538,32.9387430459647,29.7342719895808,21.009532544552,23.8004304630339,2.91480836629851,1.11255181206306,1.36696704638282,26.6239059672557,15.5563402990558,2.44878994106098,1.91371918809435,2.28778173206523,0,0.139951452323658,0.138199973804424,3.81868247206045,40.6491751751759,48.7966721104437,35.7497678120162,29.4814497380401,20.5260809921407,13.4864346384821,10.4143354213923,4.97336289769656,2.07383957266869,9.32008969630389,0.56369293868419,27.959594110224,19.0277264025662,23.9174961663179,17.1782565225382,20.9505595608565,17.8383002741546,13.020438484395,5.97698263226552,1.44950472495604,2.01621004380506,0.632022241256357,16.015292007923,18.8988161183282,11.8227948909793,11.2786818270513,8.54329825559439,4.80781798079875,2.95379054349154,3.02899349844443,1.752756553065,2.01652370273681,1.94915761479505,2.11666051608725,2.22066114144981,15.1909357022192,0,0.807424709485281,1.51096154727671,5.9888774149979,22.709579529593,21.2455884150028,29.368467933832,1.50471631210609,0,0,0.572895513439397,0.859265911718438,0,0,0,0.45032120322422,0.453142408984205,1.55328093525546,19.9271707361619,29.9268655050773,18.2684958156924,23.0951381214879,19.7036372870303,16.1782287436012,12.6680634846921,9.68364769022803,12.194929964489,13.6456494352451,18.7574681918777,12.449338531481,16.1063392848198,18.2471684353877,19.7003658517754,14.2888107384922,19.9321040625151,17.3618298417335,18.9559514369521,12.3647092912894,11.6575545811041,15.262919329703,15.4983523465759,13.3718703301742,13.1753132581463,16.4152339309852,12.6220301282213,12.1012067261408,14.2594319538155,8.97827634652382,15.5411873742668,18.5188426866059,15.1415485972785,20.1417893541756,20.0622875420387,10.2422336954558,14.2698281151699,14.6112316752843,23.7197531765366,18.5296792060393,14.3758058084661
|short_description=p1@Snai2
|short_description=p1@Snai2
}}
}}

Latest revision as of 15:54, 1 October 2015

Short description:p1@Snai2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Snai2_5end
Coexpression cluster:MCL_coexpression_mm9:390
Association with transcript: 0bp_to_ENSMUST00000023356, NM_011415, uc007yhm.1_5end
EntrezGene:Snai2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Snai2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.39
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D822.28
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D921.59
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B335.42
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C116.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.64
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C523.21
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C622.70
Mouse Meningeal cells, donor3.CNhs12109.11639-122D116.90
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E74.94
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.68
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F94.16
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.22
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.63
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7244.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3170.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8194.34
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1346.48
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8540.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6291.54
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G215.20
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.69
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.54
accessory axillary lymph node, adult.CNhs10475.1063-29H910.88
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C58.50
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I17.84
adrenal gland, embryo E18.CNhs11026.1262-18F56.93
adrenal gland, neonate N00.CNhs11191.1311-23C17.53
adrenal gland, neonate N25.CNhs11223.1377-27I33.90
amnion, adult pregnant day17.5.CNhs10488.583-22A84.20
aorta, adult.CNhs10498.46-23H17.66
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F524.59
bone (os femoris), neonate N16.CNhs11225.1525-43A612.81
bone (os femoris), neonate N20.CNhs11195.1350-25C316.49
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.30
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.82
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C613.01
eyeball, embryo E14.CNhs10521.399-16E28.97
eyeball, embryo E15.CNhs10593.426-16C910.08
eyeball, embryo E17.CNhs11023.1261-18D48.44
eyeball, neonate N00.CNhs11207.633-15C65.31
eyeball, neonate N01.CNhs11140.1532-43E75.64
eyeball, neonate N02.CNhs11205.1551-44G84.97
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E223.50
forelimb, embryo E12.CNhs10600.359-14H240.47
forelimb, embryo E13.CNhs10589.384-1E246.45
forelimb, embryo E14.CNhs10577.413-26A830.03
forelimb, embryo E15.CNhs11007.437-20E735.59
forelimb, embryo E17.CNhs10598.1517-43C432.74
forelimb, embryo E18.CNhs11008.1520-43B527.99
gonad, embryo E13.CNhs11044.1564-45I630.25
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E98.29
heart, embryo E12.CNhs11015.353-12F512.43
heart, embryo E13.CNhs11013.376-3I911.16
heart, embryo E14.CNhs10597.403-26D414.91
heart, embryo E15.CNhs11017.431-16C88.26
heart, embryo E16.CNhs11021.457-17C612.50
heart, embryo E17.CNhs11025.479-18E510.23
heart, embryo E18.CNhs11030.1283-20G39.93
heart, neonate N00.CNhs11213.639-21E38.76
heart, neonate N03.CNhs11221.1349-25I29.54
heart, neonate N10.CNhs11118.749-24G19.85
heart, neonate N16.CNhs11209.782-15G17.94
heart, neonate N20.CNhs11127.821-26I65.56
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D24.70
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I545.00
intestine, embryo E13.CNhs11010.381-16D552.72
intestine, embryo E15.CNhs10602.976-16D834.67
intestine, embryo E16.CNhs10585.463-22H430.25
intestine, embryo E17.CNhs10582.482-18D321.79
intestine, embryo E18.CNhs10526.1289-20F716.36
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E95.60
intestine, neonate N06.CNhs11102.688-20B87.54
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A58.58
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I930.16
kidney, embryo E15.CNhs10997.434-16F831.76
kidney, embryo E16.CNhs10584.464-22A527.05
kidney, embryo E17.CNhs11028.483-18I227.49
kidney, embryo E18.CNhs11001.1288-20C728.90
kidney, neonate N00.CNhs11214.646-21G727.49
kidney, neonate N10.CNhs11206.758-6D516.25
kidney, neonate N20.CNhs11113.832-19I17.09
kidney, neonate N25.CNhs11122.1353-25F38.16
kidney, neonate N30.CNhs11203.1385-42H13.95
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F84.84
liver, embryo E13.CNhs10524.378-3H64.13
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F52.89
liver, embryo E17.CNhs10510.481-18A35.35
liver, embryo E18.CNhs10579.499-43G46.90
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G23.57
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H27.07
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A310.61
liver, neonate N25.CNhs11198.1368-26H18.61
liver, neonate N30.CNhs11106.1382-42D111.58
lung, adult.CNhs10474.28-22B18.68
lung, embryo E12.CNhs10522.354-16G245.10
lung, embryo E14.CNhs10604.404-26F899.25
lung, embryo E15.CNhs11020.432-17C566.20
lung, embryo E16.CNhs10998.458-17B669.00
lung, embryo E17.CNhs10605.480-44A656.62
lung, embryo E18.CNhs10583.1287-20I640.23
lung, neonate N00.CNhs11224.640-42C631.42
lung, neonate N06.CNhs11212.683-20E549.81
lung, neonate N07.CNhs11111.715-19A344.96
lung, neonate N10.CNhs11219.750-23E647.20
lung, neonate N20.CNhs11109.822-18A412.78
lung, neonate N25.CNhs11119.1359-25C711.92
lung, neonate N30.CNhs11133.1394-42H211.86
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B69.84
mammary gland, adult pregnant day19.CNhs10476.588-5H216.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C721.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D73.35
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.79
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D54.68
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I718.59
ovary, embryo E18.CNhs11040.505-44H726.53
ovary, neonate N00.CNhs11217.1299-22I426.88
oviduct, adult pregnant day01.CNhs10500.988-6G616.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F420.88
pancreas, embryo E15.CNhs11042.1556-45F212.70
pancreas, embryo E16.CNhs11003.460-26E58.11
pancreas, embryo E17.CNhs10599.1558-45G38.56
pancreas, embryo E18.CNhs10580.1535-43I79.84
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D79.45
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E68.64
pituitary gland, embryo E13.CNhs11009.370-44C73.23
pituitary gland, embryo E14.CNhs11037.398-44A57.93
pituitary gland, embryo E15.CNhs10592.427-16B99.40
pituitary gland, embryo E16.CNhs11036.449-43F613.20
pituitary gland, embryo E17.CNhs11039.1265-44F514.15
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I74.93
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F83.09
skin, adult.CNhs10492.30-1C326.05
skin, neonate N00.CNhs11124.650-25G432.94
skin, neonate N03.CNhs11215.662-22H329.73
skin, neonate N06.CNhs11097.693-20I521.01
skin, neonate N10.CNhs11108.762-6C423.80
small intestine, neonate N16.CNhs11114.790-21I12.91
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C126.62
spleen, embryo E18.CNhs11011.1271-21F215.56
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E340.65
stomach, embryo E15.CNhs10603.1252-16G848.80
stomach, embryo E16.CNhs11022.459-17D435.75
stomach, embryo E17.CNhs11006.1035-18D529.48
stomach, embryo E18.CNhs10999.1286-20C620.53
stomach, neonate N03.CNhs11193.1340-24B813.49
stomach, neonate N07.CNhs11210.718-18A910.41
stomach, neonate N25.CNhs11104.1355-25E44.97
stomach, neonate N30.CNhs11134.1386-42I12.07
submandibular gland, adult.CNhs10469.59-29C19.32
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F527.96
testis, embryo E15.CNhs11034.443-27C519.03
testis, embryo E16.CNhs11033.470-26G523.92
testis, embryo E17.CNhs11029.486-18I517.18
testis, embryo E18.CNhs11027.503-18G520.95
testis, neonate N00.CNhs11189.1300-22B717.84
testis, neonate N07.CNhs11222.726-26I413.02
testis, neonate N10.CNhs11204.763-44D95.98
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I416.02
thymus, embryo E15.CNhs11005.430-45I218.90
thymus, embryo E16.CNhs11002.456-26C511.82
thymus, embryo E17.CNhs10581.478-18C111.28
thymus, embryo E18.CNhs10595.1273-19G48.54
thymus, neonate N02.CNhs11181.1541-43F84.81
thymus, neonate N03.CNhs11137.2104-43C72.95
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D31.75
thymus, neonate N10.CNhs11194.748-24E42.02
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G72.12
thymus, neonate N30.CNhs11132.1393-42G22.22
tongue, adult.CNhs10499.32-1B415.19
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E45.99
uterus, adult pregnant day19.CNhs10497.590-15F522.71
uterus, adult.CNhs10509.92-27E521.25
vagina, adult.CNhs10502.89-27D529.37
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I819.93
whole body, embryo E12.CNhs10587.857-27C929.93
whole body, embryo E13.CNhs10512.372-23H218.27
whole body, embryo E14.5.CNhs10578.420-27D223.10
whole body, embryo E14.CNhs10519.395-14B119.70
whole body, embryo E16.CNhs10514.453-14F216.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G512.19
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.65
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.11
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.25
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G519.70
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G517.36
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G518.96
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G511.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.26
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G513.18
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.62
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G515.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G520.14
whole body, embryo E17.5.CNhs10513.490-9F920.06
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B314.27
whole body, neonate N00.CNhs10525.657-19C214.61
whole body, neonate N01.CNhs10576.659-23C623.72
whole body, neonate N06.CNhs10515.692-21D118.53
whole body, neonate N10.CNhs10518.761-6B414.38





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element1.24e-0717
thoracic segment organ1.24e-0717
thoracic cavity1.24e-0717
thoracic segment of trunk1.24e-0717
respiratory primordium1.24e-0717
endoderm of foregut1.24e-0717
primordium3.21e-07134
lung3.32e-0714
respiratory tube3.32e-0714
respiration organ3.32e-0714
pair of lungs3.32e-0714
lung primordium3.32e-0714
lung bud3.32e-0714
surface structure5.67e-0722
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:14705925..14705951,%2B&oldid=4310471"