FFCP PHASE1:Mm9::chr3:135488752..135488764,+: Difference between revisions
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{{FFCP|EntrezGene=67547|HGNC=|MCL_coexpression_id=46|UniProt=Q91W10|association_with_transcript=0bp_to_ENSMUST00000167390,NM_001135150,uc012cyi.1_5end|description=CAGE_peak_11_at_Slc39a8_5end|id=chr3:135488752..135488764,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!1.31e-10!17;UBERON:0002048!4.39e-10!14;UBERON:0000117!4.39e-10!14;UBERON:0000171!4.39e-10!14;UBERON:0000170!4.39e-10!14;UBERON:0005597!4.39e-10!14;UBERON:0000118!4.39e-10!14;UBERON:0004119!2.72e-08!130;UBERON:0000925!2.72e-08!130;UBERON:0006595!2.72e-08!130;UBERON:0000077!5.82e-08!97;UBERON:0004921!6.56e-08!126;UBERON:0004185!6.56e-08!126;UBERON:0005911!1.81e-07!69;UBERON:0001007!1.84e-07!128;UBERON:0001555!1.84e-07!128;UBERON:0007026!1.84e-07!128;UBERON:0005178!2.90e-07!17;UBERON:0005181!2.90e-07!17;UBERON:0002224!2.90e-07!17;UBERON:0000915!2.90e-07!17;UBERON:0008947!2.90e-07!17;UBERON:0003258!2.90e-07!17;UBERON:0005177!5.57e-07!85;UBERON:0000926!5.90e-07!193;UBERON:0004120!5.90e-07!193;UBERON:0006603!5.90e-07!193;UBERON:0000065!8.67e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0005153,8.72e-26,17;UBERON:0005157,9.02e-22,20;UBERON:0002048,3.70e-19,14;UBERON:0000117,3.70e-19,14;UBERON:0000171,3.70e-19,14;UBERON:0000170,3.70e-19,14;UBERON:0005597,3.70e-19,14;UBERON:0000118,3.70e-19,14;UBERON:0005178,1.12e-15,17;UBERON:0005181,1.12e-15,17;UBERON:0002224,1.12e-15,17;UBERON:0000915,1.12e-15,17;UBERON:0008947,1.12e-15,17;UBERON:0003258,1.12e-15,17;UBERON:0005631,2.37e-08,3;UBERON:0000478,2.37e-08,3;UBERON:0000158,2.37e-08,3;UBERON:0000305,2.75e-07,1;UBERON:0006834,3.14e-07,1;UBERON:0002367,6.09e-07,1;UBERON:0009846,6.09e-07,1;UBERON:0003353,6.09e-07,1;UBERON:0004902,6.09e-07,1;UBERON:0003820,6.09e-07,1;UBERON:0009847,6.09e-07,1|phase1_expression=0.160148847104794,0,0,0,0,0.503637815735669,0,0.258246646883153,0.140788722151667,0.936258105287974,0,0,0,0.0874204024189974,0.666219523631325,0.202475267389826,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0.182975287204819,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0.539703191637817,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0,0.470354828542819,0,13.1013332899218,0.144599356919912,0,0,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,0.934122738937356,0.329119699826961,0,0.0810688095458557,0.292399974850665,0.439100230582101,0.402619256281115,0.210289948564127,0,0,0.264450566663544,0,0,0,0.403367049246685,0,0.380451252225118,0.949058123089023,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.420814919341911,0.632365371242573,0.147610147979602,0,0.370191491765402,0,0,0.393117990226406,0,0.608580364165509,0.72353147925725,0.25462585178142,0.287696137450811,0,0,0,1.11642284300551,0,0.505157755894224,0,0,2.58654466233247,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.335012514883631,0.714130922658041,2.14647012643579,1.41871629695572,0.8858587585951,1.43509291791738,1.96635977658886,1.20879487306127,1.73578870297814,0,0,1.47529281905711,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0.565815239267694,0.885905678642318,0.614870295887855,0.516856586336442,1.09060118843252,1.06949213515416,0,0,0,0,0,0,0,0,0.356737635204141,0,0,0.704015124191131,1.0591603543191,1.54369878638473,0.49465875882444,0.807322133479528,0.603129249281559,1.19372344003136,0.984845398470368,0,0.18542530201051,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0.276399947608848,0,0.158167996790568,0.203319467126849,0,0,0,0,0.165306911450672,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.410843828659309,0.389762468933385,0.358053391334963,0.39736270956253,0.240390899039938,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.0974578807397524,0.384847366561318,0.233753804363138,0,0,0,0,0.579568782096571,3.00291960721891,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.320125762024346,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.423073039458382,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0,0,0,0|short_description=p11@Slc39a8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67547 | |||
|HGNC= | |||
|MCL_coexpression_id=46 | |||
|TSSclassifier=NA | |||
|UniProt=Q91W10 | |||
|association_with_transcript=0bp_to_ENSMUST00000167390,NM_001135150,uc012cyi.1_5end | |||
|cluster_id=chr3:135488752..135488764,+ | |||
|description=CAGE_peak_11_at_Slc39a8_5end | |||
|id=chr3:135488752..135488764,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!1.31e-10!17;UBERON:0002048!4.39e-10!14;UBERON:0000117!4.39e-10!14;UBERON:0000171!4.39e-10!14;UBERON:0000170!4.39e-10!14;UBERON:0005597!4.39e-10!14;UBERON:0000118!4.39e-10!14;UBERON:0004119!2.72e-08!130;UBERON:0000925!2.72e-08!130;UBERON:0006595!2.72e-08!130;UBERON:0000077!5.82e-08!97;UBERON:0004921!6.56e-08!126;UBERON:0004185!6.56e-08!126;UBERON:0005911!1.81e-07!69;UBERON:0001007!1.84e-07!128;UBERON:0001555!1.84e-07!128;UBERON:0007026!1.84e-07!128;UBERON:0005178!2.90e-07!17;UBERON:0005181!2.90e-07!17;UBERON:0002224!2.90e-07!17;UBERON:0000915!2.90e-07!17;UBERON:0008947!2.90e-07!17;UBERON:0003258!2.90e-07!17;UBERON:0005177!5.57e-07!85;UBERON:0000926!5.90e-07!193;UBERON:0004120!5.90e-07!193;UBERON:0006603!5.90e-07!193;UBERON:0000065!8.67e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,8.72e-26,17;UBERON:0005157,9.02e-22,20;UBERON:0002048,3.70e-19,14;UBERON:0000117,3.70e-19,14;UBERON:0000171,3.70e-19,14;UBERON:0000170,3.70e-19,14;UBERON:0005597,3.70e-19,14;UBERON:0000118,3.70e-19,14;UBERON:0005178,1.12e-15,17;UBERON:0005181,1.12e-15,17;UBERON:0002224,1.12e-15,17;UBERON:0000915,1.12e-15,17;UBERON:0008947,1.12e-15,17;UBERON:0003258,1.12e-15,17;UBERON:0005631,2.37e-08,3;UBERON:0000478,2.37e-08,3;UBERON:0000158,2.37e-08,3;UBERON:0000305,2.75e-07,1;UBERON:0006834,3.14e-07,1;UBERON:0002367,6.09e-07,1;UBERON:0009846,6.09e-07,1;UBERON:0003353,6.09e-07,1;UBERON:0004902,6.09e-07,1;UBERON:0003820,6.09e-07,1;UBERON:0009847,6.09e-07,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.503637815735669,0,0.258246646883153,0.140788722151667,0.936258105287974,0,0,0,0.0874204024189974,0.666219523631325,0.202475267389826,0,0,0,0,0.255129870453209,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0.182975287204819,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0.539703191637817,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0,0.470354828542819,0,13.1013332899218,0.144599356919912,0,0,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.124406970610093,0.252722758433675,0.210441855886474,0,0,0.180062129805349,0,0,0.12811372028485,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0.710234206755631,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,0.934122738937356,0.329119699826961,0,0.0810688095458557,0.292399974850665,0.439100230582101,0.402619256281115,0.210289948564127,0,0,0.264450566663544,0,0,0,0.403367049246685,0,0.380451252225118,0.949058123089023,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0.420814919341911,0.632365371242573,0.147610147979602,0,0.370191491765402,0,0,0.393117990226406,0,0.608580364165509,0.72353147925725,0.25462585178142,0.287696137450811,0,0,0,1.11642284300551,0,0.505157755894224,0,0,2.58654466233247,0.189491411770485,0.325929952884052,0.339490171550376,0.469380496577004,0.335012514883631,0.714130922658041,2.14647012643579,1.41871629695572,0.8858587585951,1.43509291791738,1.96635977658886,1.20879487306127,1.73578870297814,0,0,1.47529281905711,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0.565815239267694,0.885905678642318,0.614870295887855,0.516856586336442,1.09060118843252,1.06949213515416,0,0,0,0,0,0,0,0,0.356737635204141,0,0,0.704015124191131,1.0591603543191,1.54369878638473,0.49465875882444,0.807322133479528,0.603129249281559,1.19372344003136,0.984845398470368,0,0.18542530201051,0.170870880797853,0,0.370389054739423,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0.276399947608848,0,0.158167996790568,0.203319467126849,0,0,0,0,0.165306911450672,0.785267825952089,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.410843828659309,0.389762468933385,0.358053391334963,0.39736270956253,0.240390899039938,0.147689527174577,0.201932899896295,0.15241361331,0.100826185136841,0.0974578807397524,0.384847366561318,0.233753804363138,0,0,0,0,0.579568782096571,3.00291960721891,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0.341467211508268,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.320125762024346,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.423073039458382,0,0.263069711437843,0.271608227691724,0,0.237270036248348,0,0,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0,0,0,0 | |||
|short_description=p11@Slc39a8 | |||
}} |
Latest revision as of 16:10, 1 October 2015
Short description: | p11@Slc39a8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Slc39a8_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | 0bp_to_ENSMUST00000167390, NM_001135150, uc012cyi.1_5end |
EntrezGene: | Slc39a8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial bud | 8.72e-26 | 17 |
epithelial fold | 9.02e-22 | 20 |
lung | 3.70e-19 | 14 |
respiratory tube | 3.70e-19 | 14 |
respiration organ | 3.70e-19 | 14 |
pair of lungs | 3.70e-19 | 14 |
lung primordium | 3.70e-19 | 14 |
lung bud | 3.70e-19 | 14 |
thoracic cavity element | 1.12e-15 | 17 |
thoracic segment organ | 1.12e-15 | 17 |
thoracic cavity | 1.12e-15 | 17 |
thoracic segment of trunk | 1.12e-15 | 17 |
respiratory primordium | 1.12e-15 | 17 |
endoderm of foregut | 1.12e-15 | 17 |
extraembryonic membrane | 2.37e-08 | 3 |
extraembryonic structure | 2.37e-08 | 3 |
membranous layer | 2.37e-08 | 3 |
amnion | 2.75e-07 | 1 |
uterus or analog | 3.14e-07 | 1 |
prostate gland | 6.09e-07 | 1 |
embryonic cloacal epithelium | 6.09e-07 | 1 |
epithelium of hindgut | 6.09e-07 | 1 |
urogenital sinus epithelium | 6.09e-07 | 1 |
prostate bud | 6.09e-07 | 1 |
prostate field | 6.09e-07 | 1 |