FFCP PHASE1:Mm9::chr3:138738142..138738217,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229877 | |EntrezGene=229877 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=E9Q6Q4,E9Q912,Q3TPS9,Q3TA69,Q3TU36,Q8BKH0,Q3TYN8 | |UniProt=E9Q6Q4,E9Q912,Q3TPS9,Q3TA69,Q3TU36,Q8BKH0,Q3TYN8 | ||
|association_with_transcript=0bp_to_ENSMUST00000029796,ENSMUST00000098574,NM_001040690,NM_145544,uc008rnr.1,uc008rns.1,uc008rnt.1,uc008rnu.1,uc008rnv.1,uc008rnw.1,uc008rnx.1_5end | |association_with_transcript=0bp_to_ENSMUST00000029796,ENSMUST00000098574,NM_001040690,NM_145544,uc008rnr.1,uc008rns.1,uc008rnt.1,uc008rnu.1,uc008rnv.1,uc008rnw.1,uc008rnx.1_5end | ||
|cluster_id=chr3:138738142..138738217,- | |||
|description=CAGE_peak_1_at_Rap1gds1_5end | |description=CAGE_peak_1_at_Rap1gds1_5end | ||
|id=chr3:138738142..138738217,- | |id=chr3:138738142..138738217,- |
Latest revision as of 17:03, 1 October 2015
Short description: | p1@Rap1gds1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rap1gds1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000029796, ENSMUST00000098574, NM_001040690, NM_145544, uc008rnr.1, uc008rns.1, uc008rnt.1, uc008rnu.1, uc008rnv.1, uc008rnw.1, uc008rnx.1_5end |
EntrezGene: | Rap1gds1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@Rap1gds1 |
---|
0
25
50
75
100
125
150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.71e-13 | 92 |
regional part of nervous system | 1.44e-12 | 54 |
nervous system | 2.40e-12 | 75 |
gray matter | 4.21e-12 | 34 |
central nervous system | 7.22e-12 | 73 |
ectoderm-derived structure | 1.38e-11 | 95 |
ectoderm | 1.38e-11 | 95 |
presumptive ectoderm | 1.38e-11 | 95 |
neural tube | 2.16e-11 | 52 |
neural rod | 2.16e-11 | 52 |
Showing 1 to 10 of 34 entries