FFCP PHASE1:Mm9::chr5:120285104..120285113,+: Difference between revisions
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{{FFCP|EntrezGene=21388|HGNC=|MCL_coexpression_id=1465|UniProt=P70326,Q5CZX7|association_with_transcript=432bp_to_ENSMUST00000018407,NM_011537,uc008zgz.2_5end|description=CAGE_peak_5_at_Tbx5_5end|id=chr5:120285104..120285113,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!5.43e-20!18;UBERON:0000948!5.43e-20!18;UBERON:0005498!5.43e-20!18;UBERON:0004140!5.43e-20!18;UBERON:0009881!5.43e-20!18;UBERON:0004141!5.43e-20!18;UBERON:0003084!5.43e-20!18;UBERON:0007005!5.43e-20!18;UBERON:0004139!5.43e-20!18;UBERON:0004291!5.43e-20!18;UBERON:0004535!2.32e-14!23;UBERON:0001009!2.32e-14!23;UBERON:0002048!1.13e-13!14;UBERON:0000117!1.13e-13!14;UBERON:0000171!1.13e-13!14;UBERON:0000170!1.13e-13!14;UBERON:0005597!1.13e-13!14;UBERON:0000118!1.13e-13!14;UBERON:0005153!3.64e-12!17;UBERON:0005178!1.46e-10!17;UBERON:0005181!1.46e-10!17;UBERON:0002224!1.46e-10!17;UBERON:0000915!1.46e-10!17;UBERON:0008947!1.46e-10!17;UBERON:0003258!1.46e-10!17;UBERON:0002102!9.62e-09!8;UBERON:0004710!9.62e-09!8;UBERON:0005419!9.62e-09!8;UBERON:0005417!9.62e-09!8;UBERON:0005729!9.62e-09!8;UBERON:0004872!2.37e-08!33;UBERON:0001048!6.86e-08!147;UBERON:0000310!9.12e-07!6;UBERON:0001443!9.12e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.88e-38,18;UBERON:0000948,5.88e-38,18;UBERON:0005498,5.88e-38,18;UBERON:0004140,5.88e-38,18;UBERON:0009881,5.88e-38,18;UBERON:0004141,5.88e-38,18;UBERON:0003084,5.88e-38,18;UBERON:0007005,5.88e-38,18;UBERON:0004139,5.88e-38,18;UBERON:0004291,5.88e-38,18;UBERON:0002102,1.60e-29,7;UBERON:0004710,1.60e-29,7;UBERON:0005419,1.60e-29,7;UBERON:0005417,1.60e-29,7;UBERON:0005729,1.60e-29,7;UBERON:0004535,2.95e-29,23;UBERON:0001009,2.95e-29,23;UBERON:0010708,9.51e-26,8;UBERON:0004872,9.48e-20,33;UBERON:0000026,6.29e-17,12;UBERON:0004708,6.29e-17,12;UBERON:0002101,6.29e-17,12;UBERON:0004357,6.29e-17,12;UBERON:0004347,6.29e-17,12;UBERON:0005732,6.29e-17,12;UBERON:0005733,6.29e-17,12;UBERON:0003081,8.02e-17,87;UBERON:0010707,1.44e-15,13;UBERON:0003103,1.18e-14,43;UBERON:0003914,3.21e-13,47;UBERON:0000926,2.39e-11,120;UBERON:0004120,2.39e-11,120;UBERON:0006603,2.39e-11,120;UBERON:0001048,4.39e-11,134;UBERON:0003102,7.03e-09,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0.187403449119458,0,1.07783996466421,2.83659120251729,2.11141348996739,1.53437012699302,1.39023624612799,1.74126083261083,1.85203922767149,0,0,0,0,1.24275463521301,1.17263029990548,1.2604344302271,1.89395788468168,0.787056926989615,1.3884040159864,2.32533944750408,1.60964040839772,2.45207218971056,1.48103864922132,1.80584210487005,1.70244500046297,1.60819986167866,0.658650345873152,1.74468344388483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0.325929952884052,0.169745085775188,0.469380496577004,0.670025029767263,0.476087281772027,0.195133647857799,0.630540576424764,1.10732344824387,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.418176592028937,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.561849044819294,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0,0.685738504770831,0,0,0,0.376437521661322,0.169229215783353,0,0,0,0.561142271657738,0,0,0.409231043169689,0,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421|short_description=p5@Tbx5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21388 | |||
|HGNC= | |||
|MCL_coexpression_id=1465 | |||
|TSSclassifier=NA | |||
|UniProt=P70326,Q5CZX7 | |||
|association_with_transcript=432bp_to_ENSMUST00000018407,NM_011537,uc008zgz.2_5end | |||
|cluster_id=chr5:120285104..120285113,+ | |||
|description=CAGE_peak_5_at_Tbx5_5end | |||
|id=chr5:120285104..120285113,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.43e-20!18;UBERON:0000948!5.43e-20!18;UBERON:0005498!5.43e-20!18;UBERON:0004140!5.43e-20!18;UBERON:0009881!5.43e-20!18;UBERON:0004141!5.43e-20!18;UBERON:0003084!5.43e-20!18;UBERON:0007005!5.43e-20!18;UBERON:0004139!5.43e-20!18;UBERON:0004291!5.43e-20!18;UBERON:0004535!2.32e-14!23;UBERON:0001009!2.32e-14!23;UBERON:0002048!1.13e-13!14;UBERON:0000117!1.13e-13!14;UBERON:0000171!1.13e-13!14;UBERON:0000170!1.13e-13!14;UBERON:0005597!1.13e-13!14;UBERON:0000118!1.13e-13!14;UBERON:0005153!3.64e-12!17;UBERON:0005178!1.46e-10!17;UBERON:0005181!1.46e-10!17;UBERON:0002224!1.46e-10!17;UBERON:0000915!1.46e-10!17;UBERON:0008947!1.46e-10!17;UBERON:0003258!1.46e-10!17;UBERON:0002102!9.62e-09!8;UBERON:0004710!9.62e-09!8;UBERON:0005419!9.62e-09!8;UBERON:0005417!9.62e-09!8;UBERON:0005729!9.62e-09!8;UBERON:0004872!2.37e-08!33;UBERON:0001048!6.86e-08!147;UBERON:0000310!9.12e-07!6;UBERON:0001443!9.12e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,5.88e-38,18;UBERON:0000948,5.88e-38,18;UBERON:0005498,5.88e-38,18;UBERON:0004140,5.88e-38,18;UBERON:0009881,5.88e-38,18;UBERON:0004141,5.88e-38,18;UBERON:0003084,5.88e-38,18;UBERON:0007005,5.88e-38,18;UBERON:0004139,5.88e-38,18;UBERON:0004291,5.88e-38,18;UBERON:0002102,1.60e-29,7;UBERON:0004710,1.60e-29,7;UBERON:0005419,1.60e-29,7;UBERON:0005417,1.60e-29,7;UBERON:0005729,1.60e-29,7;UBERON:0004535,2.95e-29,23;UBERON:0001009,2.95e-29,23;UBERON:0010708,9.51e-26,8;UBERON:0004872,9.48e-20,33;UBERON:0000026,6.29e-17,12;UBERON:0004708,6.29e-17,12;UBERON:0002101,6.29e-17,12;UBERON:0004357,6.29e-17,12;UBERON:0004347,6.29e-17,12;UBERON:0005732,6.29e-17,12;UBERON:0005733,6.29e-17,12;UBERON:0003081,8.02e-17,87;UBERON:0010707,1.44e-15,13;UBERON:0003103,1.18e-14,43;UBERON:0003914,3.21e-13,47;UBERON:0000926,2.39e-11,120;UBERON:0004120,2.39e-11,120;UBERON:0006603,2.39e-11,120;UBERON:0001048,4.39e-11,134;UBERON:0003102,7.03e-09,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485300549842228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0.180062129805349,0.30140963567143,0.0680364991513279,0.2562274405697,0.187403449119458,0,1.07783996466421,2.83659120251729,2.11141348996739,1.53437012699302,1.39023624612799,1.74126083261083,1.85203922767149,0,0,0,0,1.24275463521301,1.17263029990548,1.2604344302271,1.89395788468168,0.787056926989615,1.3884040159864,2.32533944750408,1.60964040839772,2.45207218971056,1.48103864922132,1.80584210487005,1.70244500046297,1.60819986167866,0.658650345873152,1.74468344388483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333690211432188,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0.568474235311454,0.325929952884052,0.169745085775188,0.469380496577004,0.670025029767263,0.476087281772027,0.195133647857799,0.630540576424764,1.10732344824387,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0.418176592028937,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772758376128762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.561849044819294,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0,0.685738504770831,0,0,0,0.376437521661322,0.169229215783353,0,0,0,0.561142271657738,0,0,0.409231043169689,0,0.192906610981141,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421 | |||
|short_description=p5@Tbx5 | |||
}} |
Latest revision as of 18:43, 1 October 2015
Short description: | p5@Tbx5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tbx5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1465 |
Association with transcript: | 432bp_to_ENSMUST00000018407, NM_011537, uc008zgz.2_5end |
EntrezGene: | Tbx5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 5.88e-38 | 18 |
heart | 5.88e-38 | 18 |
primitive heart tube | 5.88e-38 | 18 |
primary heart field | 5.88e-38 | 18 |
anterior lateral plate mesoderm | 5.88e-38 | 18 |
heart tube | 5.88e-38 | 18 |
heart primordium | 5.88e-38 | 18 |
cardiac mesoderm | 5.88e-38 | 18 |
cardiogenic plate | 5.88e-38 | 18 |
heart rudiment | 5.88e-38 | 18 |
forelimb | 1.60e-29 | 7 |
pectoral appendage | 1.60e-29 | 7 |
pectoral appendage bud | 1.60e-29 | 7 |
forelimb bud | 1.60e-29 | 7 |
forelimb/pectoral fin field | 1.60e-29 | 7 |
cardiovascular system | 2.95e-29 | 23 |
circulatory system | 2.95e-29 | 23 |
pectoral complex | 9.51e-26 | 8 |
splanchnic layer of lateral plate mesoderm | 9.48e-20 | 33 |
appendage | 6.29e-17 | 12 |
paired limb/fin | 6.29e-17 | 12 |
limb | 6.29e-17 | 12 |
paired limb/fin bud | 6.29e-17 | 12 |
limb bud | 6.29e-17 | 12 |
limb/fin field | 6.29e-17 | 12 |
limb field | 6.29e-17 | 12 |
lateral plate mesoderm | 8.02e-17 | 87 |
appendage girdle complex | 1.44e-15 | 13 |
compound organ | 1.18e-14 | 43 |
epithelial tube | 3.21e-13 | 47 |
mesoderm | 2.39e-11 | 120 |
mesoderm-derived structure | 2.39e-11 | 120 |
presumptive mesoderm | 2.39e-11 | 120 |
primordium | 4.39e-11 | 134 |
surface structure | 7.03e-09 | 22 |