FFCP PHASE1:Mm9::chr6:87801005..87801048,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:87801005..87801048,-
|short_description=p1@Cnbp
|description=CAGE_peak_1_at_Cnbp_5end
|association_with_transcript=0bp_to_ENSMUST00000141961_5end
|EntrezG...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12785 | |EntrezGene=12785 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=101 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000141961_5end | |||
|cluster_id=chr6:87801005..87801048,- | |||
|description=CAGE_peak_1_at_Cnbp_5end | |||
|id=chr6:87801005..87801048,- | |||
|ontology_enrichment_celltype=CL:0000542!3.92e-09!13;CL:0000051!3.92e-09!13;CL:0000838!8.39e-09!12;CL:0000084!3.63e-08!11;CL:0000827!3.63e-08!11;CL:0000988!2.55e-07!32;CL:0002032!2.55e-07!32;CL:0000037!2.55e-07!32;CL:0000566!2.55e-07!32;CL:0000837!2.55e-07!32;CL:0000791!4.95e-07!9;CL:0000789!4.95e-07!9;CL:0002420!4.95e-07!9;CL:0002419!4.95e-07!9;CL:0000790!4.95e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,3.92e-09,13;CL:0000051,3.92e-09,13;CL:0000838,8.39e-09,12;CL:0000084,3.63e-08,11;CL:0000827,3.63e-08,11;CL:0000988,2.55e-07,32;CL:0002032,2.55e-07,32;CL:0000037,2.55e-07,32;CL:0000837,2.55e-07,32;CL:0000791,4.95e-07,9;CL:0000789,4.95e-07,9;CL:0002420,4.95e-07,9;CL:0002419,4.95e-07,9;CL:0000790,4.95e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!2.19e-11!147;UBERON:0000926!9.82e-11!193;UBERON:0004120!9.82e-11!193;UBERON:0006603!9.82e-11!193;UBERON:0005057!3.05e-10!51;UBERON:0002530!5.43e-10!65;UBERON:0001041!8.47e-10!92;UBERON:0000949!9.13e-10!72;UBERON:0002368!1.10e-09!60;UBERON:0000077!1.45e-09!97;UBERON:0003104!8.30e-09!131;UBERON:0009142!8.30e-09!131;UBERON:0002405!5.70e-08!70;UBERON:0002107!1.45e-07!22;UBERON:0007499!1.45e-07!22;UBERON:0006925!1.45e-07!22;UBERON:0009497!1.45e-07!22;UBERON:0000015!1.45e-07!22;UBERON:0002423!1.45e-07!22;UBERON:0006235!1.45e-07!22;UBERON:0008835!1.45e-07!22;UBERON:0003894!1.45e-07!22;UBERON:0004161!1.45e-07!22;UBERON:0008836!1.45e-07!22;UBERON:0003929!1.50e-07!55;UBERON:0002365!2.40e-07!25;UBERON:0002330!2.40e-07!25;UBERON:0009854!6.95e-07!23;UBERON:0009856!6.95e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,9.71e-11,134;UBERON:0002530,5.43e-10,65;UBERON:0000949,9.13e-10,72;UBERON:0002368,1.10e-09,60;UBERON:0001041,1.79e-09,80;UBERON:0002107,1.45e-07,22;UBERON:0007499,1.45e-07,22;UBERON:0006925,1.45e-07,22;UBERON:0009497,1.45e-07,22;UBERON:0000015,1.45e-07,22;UBERON:0002423,1.45e-07,22;UBERON:0006235,1.45e-07,22;UBERON:0008835,1.45e-07,22;UBERON:0003894,1.45e-07,22;UBERON:0004161,1.45e-07,22;UBERON:0008836,1.45e-07,22;UBERON:0003929,1.50e-07,55;UBERON:0002365,2.40e-07,25;UBERON:0002330,2.40e-07,25;UBERON:0009854,6.95e-07,23;UBERON:0009856,6.95e-07,23 | |||
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| ||
|short_description=p1@Cnbp | |||
}} | }} |
Latest revision as of 21:13, 1 October 2015
Short description: | p1@Cnbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cnbp_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 0bp_to_ENSMUST00000141961_5end |
EntrezGene: | Cnbp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 3.92e-09 | 13 |
common lymphoid progenitor | 3.92e-09 | 13 |
lymphoid lineage restricted progenitor cell | 8.39e-09 | 12 |
T cell | 3.63e-08 | 11 |
pro-T cell | 3.63e-08 | 11 |
hematopoietic cell | 2.55e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.55e-07 | 32 |
hematopoietic stem cell | 2.55e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.55e-07 | 32 |
mature alpha-beta T cell | 4.95e-07 | 9 |
alpha-beta T cell | 4.95e-07 | 9 |
immature T cell | 4.95e-07 | 9 |
mature T cell | 4.95e-07 | 9 |
immature alpha-beta T cell | 4.95e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
primordium | 9.71e-11 | 134 |
gland | 5.43e-10 | 65 |
endocrine system | 9.13e-10 | 72 |
endocrine gland | 1.10e-09 | 60 |
foregut | 1.79e-09 | 80 |
liver | 1.45e-07 | 22 |
epithelial sac | 1.45e-07 | 22 |
digestive gland | 1.45e-07 | 22 |
epithelium of foregut-midgut junction | 1.45e-07 | 22 |
anatomical boundary | 1.45e-07 | 22 |
hepatobiliary system | 1.45e-07 | 22 |
foregut-midgut junction | 1.45e-07 | 22 |
hepatic diverticulum | 1.45e-07 | 22 |
liver primordium | 1.45e-07 | 22 |
septum transversum | 1.45e-07 | 22 |
liver bud | 1.45e-07 | 22 |
gut epithelium | 1.50e-07 | 55 |
exocrine gland | 2.40e-07 | 25 |
exocrine system | 2.40e-07 | 25 |
digestive tract diverticulum | 6.95e-07 | 23 |
sac | 6.95e-07 | 23 |