FFCP PHASE1:Mm9::chr7:29622575..29622581,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:29622575..29622581,+ | |||
|description=CAGE_peak_at_chr7:29622575..29622581,+ | |description=CAGE_peak_at_chr7:29622575..29622581,+ | ||
|id=chr7:29622575..29622581,+ | |id=chr7:29622575..29622581,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.44e-13!9;CL:0002251!4.44e-13!9;CL:0000239!1.18e-09!6;CL:0000677!1.18e-09!6;CL:0000212!1.18e-09!6;CL:0000584!1.18e-09!6;CL:0000075!4.17e-08!7;CL:0002076!6.11e-07!15 | |ontology_enrichment_celltype=CL:0002563!4.44e-13!9;CL:0002251!4.44e-13!9;CL:0000239!1.18e-09!6;CL:0000677!1.18e-09!6;CL:0000212!1.18e-09!6;CL:0000584!1.18e-09!6;CL:0000075!4.17e-08!7;CL:0002076!6.11e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.52e-23,9;CL:0002251,3.52e-23,9;CL:0000239,9.58e-17,6;CL:0000677,9.58e-17,6;CL:0000584,9.58e-17,6;CL:0000075,2.93e-14,7;CL:0000066,7.79e-14,25;CL:0002076,2.82e-13,15;CL:0000682,7.09e-10,3;CL:0000223,1.45e-09,20;CL:0002250,4.96e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.57e-25!59;UBERON:0000160!3.67e-25!43;UBERON:0000344!1.82e-21!15;UBERON:0001242!1.20e-18!13;UBERON:0000060!1.20e-18!13;UBERON:0001262!1.20e-18!13;UBERON:0004786!1.20e-18!13;UBERON:0004923!4.22e-13!24;UBERON:0003350!4.44e-13!9;UBERON:0004808!4.44e-13!9;UBERON:0001277!4.44e-13!9;UBERON:0000485!2.83e-10!11;UBERON:0001007!1.54e-07!128;UBERON:0001555!1.54e-07!128;UBERON:0007026!1.54e-07!128;UBERON:0004119!2.88e-07!130;UBERON:0000925!2.88e-07!130;UBERON:0006595!2.88e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.17e-55,31;UBERON:0000344,5.37e-39,15;UBERON:0005409,1.92e-37,47;UBERON:0001242,1.13e-33,13;UBERON:0001262,1.13e-33,13;UBERON:0004786,1.13e-33,13;UBERON:0003350,3.52e-23,9;UBERON:0004808,3.52e-23,9;UBERON:0001277,3.52e-23,9;UBERON:0004923,3.96e-23,24;UBERON:0000485,1.11e-18,11;UBERON:0001007,1.96e-14,116;UBERON:0001555,1.96e-14,116;UBERON:0007026,1.96e-14,116;UBERON:0004119,4.33e-14,118;UBERON:0000925,4.33e-14,118;UBERON:0006595,4.33e-14,118;UBERON:0002108,3.47e-12,4;UBERON:0004921,3.65e-12,114;UBERON:0000331,7.09e-10,3;UBERON:0002116,7.09e-10,3;UBERON:0001204,7.09e-10,3;UBERON:0001168,7.09e-10,3;UBERON:0001962,9.26e-07,2;UBERON:0001961,9.26e-07,2;UBERON:0001744,9.26e-07,2 | |||
|phase1_expression=0,5.23463111459042,4.54999239389536,4.53696316960245,2.00358291978539,3.69334398206158,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83981814704176,5.96464130774642,9.76194338995534,5.1691439539089,5.38678081714723,7.79096019771133,4.78857246543868,8.42575940490158,0,0,0,1.44425809875637,2.32728503501889,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,4.23120906661671,0,0,0.128867461322093,2.8235693447268,2.66853652613844,8.75037880117772,0.474529061544512,4.28217282282428,4.02136334080431,2.58643413653496,2.14460495831032,0.898819408654221,1.72910439899755,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0,0.655087691238533,0.134864346384821,0.165306911450672,0.523511883968059,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.468207537349412,0.0640251524048693,0.287177344778066,0.476293691283074,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.887379030796687,0.715308569841963,0.290692833264657,0.470546902076653,0.338458431566706,0.365855945745545,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0,0,0,0 | |phase1_expression=0,5.23463111459042,4.54999239389536,4.53696316960245,2.00358291978539,3.69334398206158,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83981814704176,5.96464130774642,9.76194338995534,5.1691439539089,5.38678081714723,7.79096019771133,4.78857246543868,8.42575940490158,0,0,0,1.44425809875637,2.32728503501889,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,4.08731288333746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,4.23120906661671,0,0,0.128867461322093,2.8235693447268,2.66853652613844,8.75037880117772,0.474529061544512,4.28217282282428,4.02136334080431,2.58643413653496,2.14460495831032,0.898819408654221,1.72910439899755,3.98282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.324016022465404,0,0.655087691238533,0.134864346384821,0.165306911450672,0.523511883968059,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0.320919209591815,0.505394423527595,0.25347929989024,0.377252682772152,0.468207537349412,0.0640251524048693,0.287177344778066,0.476293691283074,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.887379030796687,0.715308569841963,0.290692833264657,0.470546902076653,0.338458431566706,0.365855945745545,0.526139422875686,0.271608227691724,0,0,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0.467863216890817,0,0,0,0 | ||
|short_description=p@chr7:29622575..29622581,+ | |short_description=p@chr7:29622575..29622581,+ | ||
}} | }} |
Latest revision as of 23:38, 4 August 2015
Short description: | p@chr7:29622575..29622581, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29622575..29622581, + |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.52e-23 | 9 |
epithelial cell of alimentary canal | 3.52e-23 | 9 |
brush border epithelial cell | 9.58e-17 | 6 |
gut absorptive cell | 9.58e-17 | 6 |
enterocyte | 9.58e-17 | 6 |
columnar/cuboidal epithelial cell | 2.93e-14 | 7 |
epithelial cell | 7.79e-14 | 25 |
endo-epithelial cell | 2.82e-13 | 15 |
M cell of gut | 7.09e-10 | 3 |
endodermal cell | 1.45e-09 | 20 |
intestinal crypt stem cell | 4.96e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.17e-55 | 31 |
mucosa | 5.37e-39 | 15 |
gastrointestinal system | 1.92e-37 | 47 |
intestinal mucosa | 1.13e-33 | 13 |
wall of intestine | 1.13e-33 | 13 |
gastrointestinal system mucosa | 1.13e-33 | 13 |
epithelium of mucosa | 3.52e-23 | 9 |
gastrointestinal system epithelium | 3.52e-23 | 9 |
intestinal epithelium | 3.52e-23 | 9 |
organ component layer | 3.96e-23 | 24 |
simple columnar epithelium | 1.11e-18 | 11 |
digestive system | 1.96e-14 | 116 |
digestive tract | 1.96e-14 | 116 |
primitive gut | 1.96e-14 | 116 |
endoderm-derived structure | 4.33e-14 | 118 |
endoderm | 4.33e-14 | 118 |
presumptive endoderm | 4.33e-14 | 118 |
small intestine | 3.47e-12 | 4 |
subdivision of digestive tract | 3.65e-12 | 114 |
ileal mucosa | 7.09e-10 | 3 |
ileum | 7.09e-10 | 3 |
mucosa of small intestine | 7.09e-10 | 3 |
wall of small intestine | 7.09e-10 | 3 |
gut-associated lymphoid tissue | 9.26e-07 | 2 |
mucosa-associated lymphoid tissue | 9.26e-07 | 2 |
lymphoid tissue | 9.26e-07 | 2 |