FFCP PHASE1:Mm9::chr19:46578166..46578186,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=766 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:46578166..46578186,- | |||
|description=CAGE_peak_at_chr19:46578166..46578186,- | |description=CAGE_peak_at_chr19:46578166..46578186,- | ||
|id=chr19:46578166..46578186,- | |id=chr19:46578166..46578186,- | ||
|ontology_enrichment_celltype=CL:0000063!5.48e-12!66;CL:0000219!5.64e-09!54;CL:0002320!7.69e-09!46;CL:0000134!7.69e-09!46;CL:0000988!5.01e-08!32;CL:0002032!5.01e-08!32;CL:0000037!5.01e-08!32;CL:0000566!5.01e-08!32;CL:0000837!5.01e-08!32;CL:0002031!1.36e-07!25 | |ontology_enrichment_celltype=CL:0000063!5.48e-12!66;CL:0000219!5.64e-09!54;CL:0002320!7.69e-09!46;CL:0000134!7.69e-09!46;CL:0000988!5.01e-08!32;CL:0002032!5.01e-08!32;CL:0000037!5.01e-08!32;CL:0000566!5.01e-08!32;CL:0000837!5.01e-08!32;CL:0002031!1.36e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.20e-12,46;CL:0000134,1.20e-12,46;CL:0000034,2.37e-11,97;CL:0000988,2.41e-11,32;CL:0002032,2.41e-11,32;CL:0000037,2.41e-11,32;CL:0000837,2.41e-11,32;CL:0000219,3.25e-11,54;CL:0000723,9.23e-11,91;CL:0000048,9.23e-11,91;CL:0002031,1.24e-08,25;CL:0000738,1.49e-07,17;CL:0002087,1.49e-07,17;CL:0000791,2.79e-07,9;CL:0000789,2.79e-07,9;CL:0002420,2.79e-07,9;CL:0002419,2.79e-07,9;CL:0000790,2.79e-07,9;CL:0000764,8.20e-07,3;CL:0000765,8.20e-07,3;CL:0000038,8.20e-07,3;CL:0000547,8.20e-07,3;CL:0000838,8.57e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0050686,7.55e-12,6;DOID:2531,8.20e-07,3;DOID:0060083,8.20e-07,3;DOID:1240,8.20e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!7.69e-09!46 | |ontology_enrichment_uberon=UBERON:0002384!7.69e-09!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.20e-12,46 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,1.20985684522732,0.500895729946347,0.33575854382378,0.934450562382103,5.68142623142936,2.39340827657833,3.97909694747389,0.34243593645101,0.638177271962691,3.0816131387617,4.19617931611188,0.999329285446988,0.607425802169478,0,0.315462165358238,0.411343300817216,0,0.595303031057488,0.397163804803541,0.522399578277871,0.319984845586813,0.22940928106717,1.14846392823004,0.430761996159075,0.646413698057667,0.760093677825496,0.252030129759931,0.443461021310609,5.08024538767705,1.84519436275371,15.8481681015439,2.3108129580102,1.32987716286794,2.04169356262369,2.92972141515835,3.1253413780952,2.09409497589519,7.64700934440319,4.09827290975067,2.91306211818692,1.1330713617802,1.52065396829272,0.550640256485045,2.34717403304412,0.436050312760893,0.659058548203415,0.58328969722285,0.279972843250725,0,1.17447824240415,0.725362142011344,1.00828139742739,0,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0,1.97773272513395,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0.226714680320357,3.76823835312181,0.860423876981386,2.03991400112325,0,0,0,0,1.02258193546835,0.259786004602869,0.70667914902068,0.14084341977668,1.28326477414318,0,0,1.08245520505607,0.506719730950197,0.505524445014783,0.22836775943812,0.258937883647172,0.593768556259299,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0,0.884610551949874,0,0.441683036920787,0.484875253135222,1.86391761218122,0,0.209446706813455,0,1.43778149407104,0,2.03312363316904,0.299581278809645,0,0,0,0,0,0.162241263067758,0.305518091550949,1.11966273549084,0.505445516867349,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0.272145996605311,0.12811372028485,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,1.40442637462647,1.28673953557358,0.284163499395593,0,0,0.180062061461015,0,0.590292695242212,0,0,0,0,0.16455984991348,0.164167464079095,0.486412857275134,0.438599962275997,0.219550115291051,0.536825675041487,0,0,0.330418782983798,0.793351699990633,0,0,0.257734922644187,0,0,0,0.474529061544512,0.658795818896044,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0.597423819763102,0.189667900953082,0.228497025219458,0,1.62921062276251,0.581857461502877,0.561086559122548,0.822074982615345,0.147610147979602,1.41298855057237,0.863780147452604,0,0.333690211432188,0.196558995113203,0,0,0,0.50925170356284,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.739012760666419,0,0,0.339490171550376,0,1.17254380209271,1.42826184531608,0,0.315270288212382,0.8858587585951,0.159454768657487,0.327726629431476,0.518054945597687,0.867894351489069,4.52373851817817,2.71952841909355,0.491764273019036,0,0,0.117211686592203,0,0.504941854408746,0,0.390438744296638,0.430846795465598,1.19484398976276,0.891194696329576,0.566153061577665,0.404810701674894,0,0.395287777946524,0,0.99358059645788,0.178065603667255,0.651547837414304,0.659880491890142,1.32745138339963,0,0,0.754420319023592,0,0,0,0.363533729477506,0.356497378384721,0.948110273807448,0,1.03135543248187,0.340439605753788,0,0.129358683782755,0.428674070063185,0,0,0.658196082408484,0.304464949114599,0,0.21183207086382,0.441056796109924,0.8244312647074,0,0.361877549568935,0.119372344003136,0.164140899745061,0.291480836629851,0.370850604021019,0.683483523191411,0.412773735926445,0.370389054739423,0.188368457004691,0.546776910884101,0.228778173206523,0.679913719975421,1.25956307091292,1.10559979043539,0.954670618015114,0,0.406638934253697,0.216010681643603,0.418176592028937,0.87345025498471,0.269728692769641,0.247960367176008,0.523511883968059,0.518459893167171,0.621339313086926,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,1.89606672376907,0,0.205421914329655,0,0.716106782669926,0.39736270956253,0.600977247599844,0.295379054349154,0.908698049533329,0.609654453239999,0.504130925684203,0.0974578807397524,1.82802499116626,1.28564592399726,0,0,0.0897138566094757,0,0.386379188064381,0,1.28206136987086,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0.183843508450014,0.44449345560323,0,0.64183841918363,0,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.338458431566706,0,0,0.135804113845862,0,0.118635018124174,0,0,0.464810523557898,0,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0 | |phase1_expression=0,0.697950815278722,0.909998478779072,1.20985684522732,0.500895729946347,0.33575854382378,0.934450562382103,5.68142623142936,2.39340827657833,3.97909694747389,0.34243593645101,0.638177271962691,3.0816131387617,4.19617931611188,0.999329285446988,0.607425802169478,0,0.315462165358238,0.411343300817216,0,0.595303031057488,0.397163804803541,0.522399578277871,0.319984845586813,0.22940928106717,1.14846392823004,0.430761996159075,0.646413698057667,0.760093677825496,0.252030129759931,0.443461021310609,5.08024538767705,1.84519436275371,15.8481681015439,2.3108129580102,1.32987716286794,2.04169356262369,2.92972141515835,3.1253413780952,2.09409497589519,7.64700934440319,4.09827290975067,2.91306211818692,1.1330713617802,1.52065396829272,0.550640256485045,2.34717403304412,0.436050312760893,0.659058548203415,0.58328969722285,0.279972843250725,0,1.17447824240415,0.725362142011344,1.00828139742739,0,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0,1.97773272513395,1.4209602298922,0.299600110518405,0.384218305321555,0,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0.307213066512487,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0.226714680320357,3.76823835312181,0.860423876981386,2.03991400112325,0,0,0,0,1.02258193546835,0.259786004602869,0.70667914902068,0.14084341977668,1.28326477414318,0,0,1.08245520505607,0.506719730950197,0.505524445014783,0.22836775943812,0.258937883647172,0.593768556259299,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0.125666591329675,0.247194967734374,0,0.884610551949874,0,0.441683036920787,0.484875253135222,1.86391761218122,0,0.209446706813455,0,1.43778149407104,0,2.03312363316904,0.299581278809645,0,0,0,0,0,0.162241263067758,0.305518091550949,1.11966273549084,0.505445516867349,0.631325567659422,0.260240885925407,0,0,0.150704817835715,0.272145996605311,0.12811372028485,0,0.258703370739016,0,0,0,0,0.278047249225598,0,0.205782136407943,0.199034266818493,1.40442637462647,1.28673953557358,0.284163499395593,0,0,0.180062061461015,0,0.590292695242212,0,0,0,0,0.16455984991348,0.164167464079095,0.486412857275134,0.438599962275997,0.219550115291051,0.536825675041487,0,0,0.330418782983798,0.793351699990633,0,0,0.257734922644187,0,0,0,0.474529061544512,0.658795818896044,0.754005626400808,0.596869416123452,0.19496408711912,0,0,0.597423819763102,0.189667900953082,0.228497025219458,0,1.62921062276251,0.581857461502877,0.561086559122548,0.822074982615345,0.147610147979602,1.41298855057237,0.863780147452604,0,0.333690211432188,0.196558995113203,0,0,0,0.50925170356284,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0.739012760666419,0,0,0.339490171550376,0,1.17254380209271,1.42826184531608,0,0.315270288212382,0.8858587585951,0.159454768657487,0.327726629431476,0.518054945597687,0.867894351489069,4.52373851817817,2.71952841909355,0.491764273019036,0,0,0.117211686592203,0,0.504941854408746,0,0.390438744296638,0.430846795465598,1.19484398976276,0.891194696329576,0.566153061577665,0.404810701674894,0,0.395287777946524,0,0.99358059645788,0.178065603667255,0.651547837414304,0.659880491890142,1.32745138339963,0,0,0.754420319023592,0,0,0,0.363533729477506,0.356497378384721,0.948110273807448,0,1.03135543248187,0.340439605753788,0,0.129358683782755,0.428674070063185,0,0,0.658196082408484,0.304464949114599,0,0.21183207086382,0.441056796109924,0.8244312647074,0,0.361877549568935,0.119372344003136,0.164140899745061,0.291480836629851,0.370850604021019,0.683483523191411,0.412773735926445,0.370389054739423,0.188368457004691,0.546776910884101,0.228778173206523,0.679913719975421,1.25956307091292,1.10559979043539,0.954670618015114,0,0.406638934253697,0.216010681643603,0.418176592028937,0.87345025498471,0.269728692769641,0.247960367176008,0.523511883968059,0.518459893167171,0.621339313086926,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,1.89606672376907,0,0.205421914329655,0,0.716106782669926,0.39736270956253,0.600977247599844,0.295379054349154,0.908698049533329,0.609654453239999,0.504130925684203,0.0974578807397524,1.82802499116626,1.28564592399726,0,0,0.0897138566094757,0,0.386379188064381,0,1.28206136987086,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.486213434136588,0,0.183843508450014,0.44449345560323,0,0.64183841918363,0,0,0.377252682772152,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0.338458431566706,0,0,0.135804113845862,0,0.118635018124174,0,0,0.464810523557898,0,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0 | ||
|short_description=p@chr19:46578166..46578186,- | |short_description=p@chr19:46578166..46578186,- | ||
}} | }} |
Latest revision as of 05:48, 4 August 2015
Short description: | p@chr19:46578166..46578186, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:46578166..46578186, - |
Coexpression cluster: | MCL_coexpression_mm9:766 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.20e-12 | 46 |
mesenchymal cell | 1.20e-12 | 46 |
stem cell | 2.37e-11 | 97 |
hematopoietic cell | 2.41e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.41e-11 | 32 |
hematopoietic stem cell | 2.41e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.41e-11 | 32 |
motile cell | 3.25e-11 | 54 |
somatic stem cell | 9.23e-11 | 91 |
multi fate stem cell | 9.23e-11 | 91 |
hematopoietic lineage restricted progenitor cell | 1.24e-08 | 25 |
leukocyte | 1.49e-07 | 17 |
nongranular leukocyte | 1.49e-07 | 17 |
mature alpha-beta T cell | 2.79e-07 | 9 |
alpha-beta T cell | 2.79e-07 | 9 |
immature T cell | 2.79e-07 | 9 |
mature T cell | 2.79e-07 | 9 |
immature alpha-beta T cell | 2.79e-07 | 9 |
erythroid lineage cell | 8.20e-07 | 3 |
erythroblast | 8.20e-07 | 3 |
erythroid progenitor cell | 8.20e-07 | 3 |
proerythroblast | 8.20e-07 | 3 |
lymphoid lineage restricted progenitor cell | 8.57e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.20e-12 | 46 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 7.55e-12 | 6 |
hematologic cancer | 8.20e-07 | 3 |
immune system cancer | 8.20e-07 | 3 |
leukemia | 8.20e-07 | 3 |