FFCP PHASE1:Hg19::chr10:102268631..102268637,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25956 | |EntrezGene=25956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23197 | |HGNC=23197 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-81bp_to_ENST00000484848,uc001krg.1_5end | |association_with_transcript=-81bp_to_ENST00000484848,uc001krg.1_5end | ||
|cluster_id=chr10:102268631..102268637,- | |||
|coexpression_cluster_id=C1100 | |||
|description=CAGE_peak_10_at_SEC31B_5end | |description=CAGE_peak_10_at_SEC31B_5end | ||
|id=chr10:102268631..102268637,- | |id=chr10:102268631..102268637,- | ||
|ontology_enrichment_celltype=CL:0000084!4.41e-22!25;CL:0000827!4.41e-22!25;CL:0000838!3.34e-12!52;CL:0000542!6.10e-12!53;CL:0000051!6.10e-12!53;CL:0002127!6.03e-09!1;CL:0000914!6.03e-09!1;CL:0000911!6.03e-09!1;CL:0000814!6.03e-09!1;CL:0002042!6.03e-09!1;CL:0002039!6.03e-09!1;CL:0002040!6.03e-09!1;CL:0002041!6.03e-09!1 | |ontology_enrichment_celltype=CL:0000084!4.41e-22!25;CL:0000827!4.41e-22!25;CL:0000838!3.34e-12!52;CL:0000542!6.10e-12!53;CL:0000051!6.10e-12!53;CL:0002127!6.03e-09!1;CL:0000914!6.03e-09!1;CL:0000911!6.03e-09!1;CL:0000814!6.03e-09!1;CL:0002042!6.03e-09!1;CL:0002039!6.03e-09!1;CL:0002040!6.03e-09!1;CL:0002041!6.03e-09!1 | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.45e-26;1!CL:0000911;2.45e-26;1!CL:0000814;2.45e-26;1!CL:0000084;2.29e-16;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,2.78e-26,1;CL:0000914,2.78e-26,1;CL:0000911,2.78e-26,1;CL:0000814,2.78e-26,1;CL:0002042,2.78e-26,1;CL:0002039,2.78e-26,1;CL:0002040,2.78e-26,1;CL:0002041,2.78e-26,1;CL:0000084,2.29e-16,25;CL:0000827,2.29e-16,25;CL:0000893,7.30e-14,2;CL:0002489,7.30e-14,2;CL:0000809,7.30e-14,2;CL:0000808,7.30e-14,2;CL:0000894,7.30e-14,2;CL:0000806,7.30e-14,2;CL:0000807,7.30e-14,2;CL:0000805,7.30e-14,2;CL:0002425,7.30e-14,2;CL:0000838,4.30e-08,52;CL:0000542,6.01e-08,53;CL:0000051,6.01e-08,53 | |||
|ontology_enrichment_development_v019=CL:0002425;6.85e-14;2 | |||
|ontology_enrichment_disease=DOID:0060058!3.47e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.03e-08,51;DOID:0060083,3.03e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.01e-16!4;UBERON:0005058!1.01e-16!4;UBERON:0009113!1.01e-16!4;UBERON:0003295!1.01e-16!4;UBERON:0005562!1.01e-16!4;UBERON:0001042!1.55e-11!10;UBERON:0009145!1.55e-11!10;UBERON:0003351!2.48e-11!6;UBERON:0006562!1.68e-10!11;UBERON:0004177!8.73e-10!7;UBERON:0002372!3.79e-08!1;UBERON:0001961!3.79e-08!1;UBERON:0001744!3.79e-08!1;UBERON:0001735!3.79e-08!1;UBERON:0000974!5.49e-07!10;UBERON:0003408!5.49e-07!10 | |ontology_enrichment_uberon=UBERON:0002370!1.01e-16!4;UBERON:0005058!1.01e-16!4;UBERON:0009113!1.01e-16!4;UBERON:0003295!1.01e-16!4;UBERON:0005562!1.01e-16!4;UBERON:0001042!1.55e-11!10;UBERON:0009145!1.55e-11!10;UBERON:0003351!2.48e-11!6;UBERON:0006562!1.68e-10!11;UBERON:0004177!8.73e-10!7;UBERON:0002372!3.79e-08!1;UBERON:0001961!3.79e-08!1;UBERON:0001744!3.79e-08!1;UBERON:0001735!3.79e-08!1;UBERON:0000974!5.49e-07!10;UBERON:0003408!5.49e-07!10 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.40e-07,4;UBERON:0005058,1.40e-07,4;UBERON:0009113,1.40e-07,4;UBERON:0003295,1.40e-07,4;UBERON:0005562,1.40e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,1.17030546773475,0,0,0,0.334231370655521,0,0,0,0.512365278902701,1.1705341280389,0.493313713811028,1.10540007114339,1.15921234294021,0,0.267540828089713,0,0.906474741580529,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24170287987055,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,1.27541018183058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,2.63686198762815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.31037357147929,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,1.17030546773475,0,0,0,0.334231370655521,0,0,0,0.512365278902701,1.1705341280389,0.493313713811028,1.10540007114339,1.15921234294021,0,0.267540828089713,0,0.906474741580529,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24170287987055,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,1.27541018183058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557216921387392,0,0,0,0,0,0,0,2.63686198762815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217294743844016,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.31037357147929,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@SEC31B | |short_description=p10@SEC31B | ||
}} | }} |
Latest revision as of 21:49, 15 September 2015
Short description: | p10@SEC31B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SEC31B_5end |
Coexpression cluster: | C1100_CD4_NK_anaplastic_acute_Hodgkin_adult_cord |
Association with transcript: | -81bp_to_ENST00000484848, uc001krg.1_5end |
EntrezGene: | SEC31B |
HGNC: | 23197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 2.78e-26 | 1 |
immature NK T cell | 2.78e-26 | 1 |
effector T cell | 2.78e-26 | 1 |
mature NK T cell | 2.78e-26 | 1 |
immature NK T cell stage IV | 2.78e-26 | 1 |
immature NK T cell stage I | 2.78e-26 | 1 |
immature NK T cell stage II | 2.78e-26 | 1 |
immature NK T cell stage III | 2.78e-26 | 1 |
T cell | 2.29e-16 | 25 |
pro-T cell | 2.29e-16 | 25 |
thymocyte | 7.30e-14 | 2 |
double negative thymocyte | 7.30e-14 | 2 |
double-positive, alpha-beta thymocyte | 7.30e-14 | 2 |
DN4 thymocyte | 7.30e-14 | 2 |
DN1 thymic pro-T cell | 7.30e-14 | 2 |
DN2 thymocyte | 7.30e-14 | 2 |
DN3 thymocyte | 7.30e-14 | 2 |
immature single positive thymocyte | 7.30e-14 | 2 |
early T lineage precursor | 7.30e-14 | 2 |
lymphoid lineage restricted progenitor cell | 4.30e-08 | 52 |
lymphocyte | 6.01e-08 | 53 |
common lymphoid progenitor | 6.01e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.40e-07 | 4 |
hemolymphoid system gland | 1.40e-07 | 4 |
thymic region | 1.40e-07 | 4 |
pharyngeal gland | 1.40e-07 | 4 |
thymus primordium | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.03e-08 | 51 |
immune system cancer | 3.03e-08 | 51 |