FFCP PHASE1:Hg19::chr10:102308108..102308124,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:102308108..102308124,+ | |||
|description=CAGE_peak_at_chr10:102308108..102308124,+ | |description=CAGE_peak_at_chr10:102308108..102308124,+ | ||
|id=chr10:102308108..102308124,+ | |id=chr10:102308108..102308124,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002262;3.34e-11;2!CL:1000398;3.34e-11;2!CL:0002521;6.78e-08;3!CL:0002567;6.78e-08;3!CL:0002582;6.78e-08;3!CL:0002231;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.47e-11,2;CL:1000398,2.47e-11,2;CL:0002521,5.93e-08,3;CL:0002231,6.78e-08,3;CL:0002567,7.26e-08,3;CL:0002582,8.29e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;6.78e-08;3!DOID:127;6.78e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.76e-08,3;DOID:127,7.76e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003937!2.45e-09!12;UBERON:0005399!2.45e-09!12;UBERON:0003101!1.14e-08!22;UBERON:0000079!1.14e-08!22;UBERON:0002367!2.80e-08!11;UBERON:0010147!2.80e-08!11;UBERON:0009846!2.80e-08!11;UBERON:0003353!2.80e-08!11;UBERON:0004902!2.80e-08!11;UBERON:0003820!2.80e-08!11;UBERON:0009847!2.80e-08!11;UBERON:0007023!6.80e-08!115;UBERON:0000162!1.99e-07!14;UBERON:0001353!1.99e-07!14;UBERON:0000163!1.99e-07!14;UBERON:0006866!1.99e-07!14;UBERON:0000164!1.99e-07!14;UBERON:0000931!1.99e-07!14;UBERON:0004122!9.17e-07!15 | |ontology_enrichment_uberon=UBERON:0003937!2.45e-09!12;UBERON:0005399!2.45e-09!12;UBERON:0003101!1.14e-08!22;UBERON:0000079!1.14e-08!22;UBERON:0002367!2.80e-08!11;UBERON:0010147!2.80e-08!11;UBERON:0009846!2.80e-08!11;UBERON:0003353!2.80e-08!11;UBERON:0004902!2.80e-08!11;UBERON:0003820!2.80e-08!11;UBERON:0009847!2.80e-08!11;UBERON:0007023!6.80e-08!115;UBERON:0000162!1.99e-07!14;UBERON:0001353!1.99e-07!14;UBERON:0000163!1.99e-07!14;UBERON:0006866!1.99e-07!14;UBERON:0000164!1.99e-07!14;UBERON:0000931!1.99e-07!14;UBERON:0004122!9.17e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;5.16e-21;1!UBERON:0006518;5.16e-21;1!UBERON:0008949;5.16e-21;1!UBERON:0000101;5.16e-21;1!UBERON:0002167;5.16e-21;1!UBERON:0001281;3.34e-11;2!UBERON:0003497;3.34e-11;2!UBERON:0003909;3.34e-11;2!UBERON:0003835;3.34e-11;2!UBERON:0002190;6.78e-08;3!UBERON:0001280;6.78e-08;3!UBERON:0004647;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,4.22e-21,1;UBERON:0006518,4.22e-21,1;UBERON:0008949,4.22e-21,1;UBERON:0000101,4.22e-21,1;UBERON:0002167,4.22e-21,1;UBERON:0001281,2.47e-11,2;UBERON:0003497,2.47e-11,2;UBERON:0003909,2.47e-11,2;UBERON:0003835,2.47e-11,2;UBERON:0001280,5.54e-08,3;UBERON:0004647,5.54e-08,3;UBERON:0005171,5.54e-08,3;UBERON:0002190,5.93e-08,3 | |||
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| ||
|short_description=p@chr10:102308108..102308124,+ | |short_description=p@chr10:102308108..102308124,+ | ||
}} | }} |
Latest revision as of 09:33, 23 July 2015
Short description: | p@chr10:102308108..102308124, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:102308108..102308124, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.47e-11 | 2 |
endothelial cell of hepatic sinusoid | 2.47e-11 | 2 |
subcutaneous fat cell | 5.93e-08 | 3 |
epithelial cell of prostate | 6.78e-08 | 3 |
light melanocyte | 7.26e-08 | 3 |
visceral preadipocyte | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 4.22e-21 | 1 |
right lung lobe | 4.22e-21 | 1 |
lower lobe of lung | 4.22e-21 | 1 |
lobe of lung | 4.22e-21 | 1 |
right lung | 4.22e-21 | 1 |
hepatic sinusoid | 2.47e-11 | 2 |
abdomen blood vessel | 2.47e-11 | 2 |
sinusoid | 2.47e-11 | 2 |
abdominal segment blood vessel | 2.47e-11 | 2 |
liver parenchyma | 5.54e-08 | 3 |
liver lobule | 5.54e-08 | 3 |
hepatic duct | 5.54e-08 | 3 |
subcutaneous adipose tissue | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.76e-08 | 3 |
leiomyoma | 7.76e-08 | 3 |