FFCP PHASE1:Mm9::chr5:105987878..105987910,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100604 | |EntrezGene=100604 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=598 | |||
|TSSclassifier=NA | |||
|UniProt=D3YUV5 | |UniProt=D3YUV5 | ||
|association_with_transcript=1bp_to_ENSMUST00000153754_5end | |association_with_transcript=1bp_to_ENSMUST00000153754_5end | ||
|cluster_id=chr5:105987878..105987910,+ | |||
|description=CAGE_peak_9_at_Lrrc8c_5end | |description=CAGE_peak_9_at_Lrrc8c_5end | ||
|id=chr5:105987878..105987910,+ | |id=chr5:105987878..105987910,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002476,4.66e-19,2;CL:0002092,1.09e-12,3;CL:0002540,1.09e-12,3;CL:0002194,5.10e-10,4;CL:0000766,5.10e-10,4;CL:0000234,5.10e-10,4;CL:0000576,5.10e-10,4;CL:0000235,5.10e-10,4;CL:0000864,5.10e-10,4;CL:0002009,5.10e-10,4;CL:0000040,5.10e-10,4;CL:0000559,5.10e-10,4;CL:0000839,9.51e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.19e-16!70;UBERON:0002193!4.51e-13!48;UBERON:0002390!6.23e-12!45;UBERON:0003061!6.23e-12!45;UBERON:0001007!3.13e-10!128;UBERON:0001555!3.13e-10!128;UBERON:0007026!3.13e-10!128;UBERON:0004921!6.10e-10!126;UBERON:0004185!6.10e-10!126;UBERON:0004119!7.33e-10!130;UBERON:0000925!7.33e-10!130;UBERON:0006595!7.33e-10!130;UBERON:0005057!8.30e-09!51;UBERON:0002371!4.42e-08!16;UBERON:0001041!9.89e-07!92 | |ontology_enrichment_uberon=UBERON:0002405!1.19e-16!70;UBERON:0002193!4.51e-13!48;UBERON:0002390!6.23e-12!45;UBERON:0003061!6.23e-12!45;UBERON:0001007!3.13e-10!128;UBERON:0001555!3.13e-10!128;UBERON:0007026!3.13e-10!128;UBERON:0004921!6.10e-10!126;UBERON:0004185!6.10e-10!126;UBERON:0004119!7.33e-10!130;UBERON:0000925!7.33e-10!130;UBERON:0006595!7.33e-10!130;UBERON:0005057!8.30e-09!51;UBERON:0002371!4.42e-08!16;UBERON:0001041!9.89e-07!92 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.38e-14,16;UBERON:0002193,2.21e-11,48;UBERON:0002405,2.21e-11,48;UBERON:0000029,1.63e-10,1;UBERON:0001097,1.63e-10,1;UBERON:0003968,1.63e-10,1;UBERON:0001467,1.63e-10,1;UBERON:0001474,3.73e-10,22;UBERON:0004765,3.73e-10,22;UBERON:0001434,3.73e-10,22;UBERON:0002390,2.78e-09,45;UBERON:0003061,2.78e-09,45;UBERON:0002204,5.41e-07,32 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.630924330716475,0.822686601634433,1.27316895539409,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,1.3498495759221,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,11.6522047641227,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0.239630249011841,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0.19496408711912,0,0.432276099749388,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0,0,0.592905254174298,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,3.01582567878545,5.4390568381871,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.874442509889552,0,1.02522528478712,0,0.185194527369712,0.188368457004691,1.36694227721025,0.915112692826091,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0.179026695667481,0,0.240390899039938,0.147689527174577,0.201932899896295,0.381034033274999,0.504130925684203,0.877120926657772,0.673482891482306,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.630924330716475,0.822686601634433,1.27316895539409,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0.380046838912748,0,0.221730510655305,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,1.3498495759221,1.97773272513395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,11.6522047641227,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0.239630249011841,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.596869416123452,0.19496408711912,0,0.432276099749388,0.796565093017469,0,0,0,0,0,0,0,0.147610147979602,0,0,0.592905254174298,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0.287696137450811,0,0,1.43768206527355,0.744281895337007,0.312037673114561,0.252578877947112,0.358794827043824,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,3.01582567878545,5.4390568381871,0.491764273019036,0.827810238914197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0.356497378384721,0.632073515871632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.0603129249281559,0,0,0.874442509889552,0,1.02522528478712,0,0.185194527369712,0.188368457004691,1.36694227721025,0.915112692826091,0,0,0,0,0,0,0,0.209088296014469,0,0,0.0826534557253359,0,0.259229946583586,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0,0,0.179026695667481,0,0.240390899039938,0.147689527174577,0.201932899896295,0.381034033274999,0.504130925684203,0.877120926657772,0.673482891482306,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@Lrrc8c | |short_description=p9@Lrrc8c | ||
}} | }} |
Latest revision as of 13:37, 1 October 2015
Short description: | p9@Lrrc8c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Lrrc8c_5end |
Coexpression cluster: | MCL_coexpression_mm9:598 |
Association with transcript: | 1bp_to_ENSMUST00000153754_5end |
EntrezGene: | Lrrc8c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 4.66e-19 | 2 |
bone marrow cell | 1.09e-12 | 3 |
mesenchymal stem cell of the bone marrow | 1.09e-12 | 3 |
monopoietic cell | 5.10e-10 | 4 |
myeloid leukocyte | 5.10e-10 | 4 |
phagocyte | 5.10e-10 | 4 |
monocyte | 5.10e-10 | 4 |
macrophage | 5.10e-10 | 4 |
tissue-resident macrophage | 5.10e-10 | 4 |
macrophage dendritic cell progenitor | 5.10e-10 | 4 |
monoblast | 5.10e-10 | 4 |
promonocyte | 5.10e-10 | 4 |
myeloid lineage restricted progenitor cell | 9.51e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.38e-14 | 16 |
hemolymphoid system | 2.21e-11 | 48 |
immune system | 2.21e-11 | 48 |
lymph node | 1.63e-10 | 1 |
axillary lymph node | 1.63e-10 | 1 |
peripheral lymph node | 1.63e-10 | 1 |
shoulder | 1.63e-10 | 1 |
bone element | 3.73e-10 | 22 |
skeletal element | 3.73e-10 | 22 |
skeletal system | 3.73e-10 | 22 |
hematopoietic system | 2.78e-09 | 45 |
blood island | 2.78e-09 | 45 |
musculoskeletal system | 5.41e-07 | 32 |