FFCP PHASE1:Hg19::chr14:96343299..96343304,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=143bp_to_ENST00000554321_5end | |association_with_transcript=143bp_to_ENST00000554321_5end | ||
|cluster_id=chr14:96343299..96343304,+ | |||
|coexpression_cluster_id=C3469 | |||
|description=CAGE_peak_4_at_ENST00000554321_5end | |description=CAGE_peak_4_at_ENST00000554321_5end | ||
|id=chr14:96343299..96343304,+ | |id=chr14:96343299..96343304,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.81e-25!5;CL:0002605!2.68e-15!3;CL:0000128!2.64e-11!7;CL:0000126!2.64e-11!7;CL:0000127!2.64e-11!7;CL:0002453!2.64e-11!7;CL:0000540!2.49e-08!6;CL:0000031!2.49e-08!6;CL:0000404!2.49e-08!6;CL:0002319!3.69e-08!25 | |ontology_enrichment_celltype=CL:0002322!1.81e-25!5;CL:0002605!2.68e-15!3;CL:0000128!2.64e-11!7;CL:0000126!2.64e-11!7;CL:0000127!2.64e-11!7;CL:0002453!2.64e-11!7;CL:0000540!2.49e-08!6;CL:0000031!2.49e-08!6;CL:0000404!2.49e-08!6;CL:0002319!3.69e-08!25 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!9.36e-44!86;UBERON:0002780!1.58e-41!41;UBERON:0001890!1.58e-41!41;UBERON:0006240!1.58e-41!41;UBERON:0003080!1.87e-40!42;UBERON:0001893!2.53e-40!34;UBERON:0001017!1.08e-39!82;UBERON:0001049!3.98e-39!57;UBERON:0005068!3.98e-39!57;UBERON:0006241!3.98e-39!57;UBERON:0007135!3.98e-39!57;UBERON:0000073!4.28e-39!94;UBERON:0001016!4.28e-39!94;UBERON:0001869!3.71e-38!32;UBERON:0002616!1.20e-37!59;UBERON:0002791!4.78e-37!33;UBERON:0002020!7.02e-36!34;UBERON:0003528!7.02e-36!34;UBERON:0000955!4.68e-34!69;UBERON:0006238!4.68e-34!69;UBERON:0003056!9.03e-33!61;UBERON:0003075!4.64e-32!86;UBERON:0007284!4.64e-32!86;UBERON:0002346!2.14e-30!90;UBERON:0000956!1.54e-28!25;UBERON:0000203!1.54e-28!25;UBERON:0000033!1.65e-20!123;UBERON:0000153!2.63e-19!129;UBERON:0007811!2.63e-19!129;UBERON:0004121!3.25e-19!169;UBERON:0002619!4.86e-19!22;UBERON:0000924!1.25e-18!173;UBERON:0006601!1.25e-18!173;UBERON:0001950!6.84e-17!20;UBERON:0007023!1.62e-15!115;UBERON:0000200!1.03e-12!6;UBERON:0009663!2.86e-11!7;UBERON:0002308!8.67e-09!9;UBERON:0002420!8.67e-09!9;UBERON:0000125!8.67e-09!9;UBERON:0007245!8.67e-09!9;UBERON:0010009!8.67e-09!9;UBERON:0010011!8.67e-09!9;UBERON:0000454!8.67e-09!9;UBERON:0000025!4.69e-08!194;UBERON:0002771!2.85e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;5.04e-34;3!UBERON:0002298;8.34e-18;6!UBERON:0002680;2.31e-12;9!UBERON:0001895;2.31e-12;9!UBERON:0004733;1.27e-09;12!UBERON:0002028;1.27e-09;12!UBERON:0004732;5.49e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000988,5.96e-34,3;UBERON:0002298,9.07e-18,6;UBERON:0002680,2.45e-12,9;UBERON:0001895,2.45e-12,9;UBERON:0010092,2.45e-12,9;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0003076,5.93e-08,15;UBERON:0003057,5.93e-08,15 | |||
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|short_description=p4@ENST00000554321 | |short_description=p4@ENST00000554321 | ||
}} | }} |
Latest revision as of 00:07, 25 July 2015
Short description: | p4@ENST00000554321 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000554321_5end |
Coexpression cluster: | C3469_pons_iPS_non_H9_diencephalon_teratocarcinoma_HES3GFP |
Association with transcript: | 143bp_to_ENST00000554321_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pons | 5.96e-34 | 3 |
brainstem | 9.07e-18 | 6 |
regional part of metencephalon | 2.45e-12 | 9 |
metencephalon | 2.45e-12 | 9 |
future metencephalon | 2.45e-12 | 9 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
posterior neural tube | 5.93e-08 | 15 |
chordal neural plate | 5.93e-08 | 15 |