FFCP PHASE1:Mm9::chr7:117307829..117307835,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1793 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:117307829..117307835,+ | |||
|description=CAGE_peak_at_chr7:117307829..117307835,+ | |description=CAGE_peak_at_chr7:117307829..117307835,+ | ||
|id=chr7:117307829..117307835,+ | |id=chr7:117307829..117307835,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.70e-22!25;CL:0002563!1.98e-16!9;CL:0002251!1.98e-16!9;CL:0000223!9.82e-16!20;CL:0000063!7.09e-15!66;CL:0002076!3.91e-13!15;CL:0000075!6.86e-13!7;CL:0000239!2.06e-11!6;CL:0000677!2.06e-11!6;CL:0000212!2.06e-11!6;CL:0000584!2.06e-11!6;CL:0000144!3.98e-11!121;CL:0000012!3.98e-11!121;CL:0002371!6.22e-09!118;CL:0000548!1.37e-08!115;CL:0000004!1.37e-08!115;CL:0000255!1.37e-08!115 | |ontology_enrichment_celltype=CL:0000066!1.70e-22!25;CL:0002563!1.98e-16!9;CL:0002251!1.98e-16!9;CL:0000223!9.82e-16!20;CL:0000063!7.09e-15!66;CL:0002076!3.91e-13!15;CL:0000075!6.86e-13!7;CL:0000239!2.06e-11!6;CL:0000677!2.06e-11!6;CL:0000212!2.06e-11!6;CL:0000584!2.06e-11!6;CL:0000144!3.98e-11!121;CL:0000012!3.98e-11!121;CL:0002371!6.22e-09!118;CL:0000548!1.37e-08!115;CL:0000004!1.37e-08!115;CL:0000255!1.37e-08!115 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.77e-39,9;CL:0002251,3.77e-39,9;CL:0000066,3.60e-36,25;CL:0000223,6.25e-33,20;CL:0000239,1.95e-23,6;CL:0000677,1.95e-23,6;CL:0000584,1.95e-23,6;CL:0002076,3.35e-23,15;CL:0000075,4.33e-20,7;CL:0002250,1.56e-17,3;CL:0000182,4.75e-11,5;CL:0002321,2.20e-08,70;CL:0000682,7.57e-08,3;CL:0000213,2.75e-07,1;CL:0002078,2.75e-07,1;CL:0000115,2.75e-07,1;CL:0002262,2.75e-07,1;CL:1000398,2.75e-07,1;CL:0000057,8.98e-07,1;CL:0000632,8.98e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!7.09e-19!11;UBERON:0003350!1.98e-16!9;UBERON:0004808!1.98e-16!9;UBERON:0001277!1.98e-16!9;UBERON:0001242!1.16e-10!13;UBERON:0000060!1.16e-10!13;UBERON:0001262!1.16e-10!13;UBERON:0004786!1.16e-10!13;UBERON:0000344!6.07e-09!15;UBERON:0000490!4.25e-08!66;UBERON:0004923!4.33e-07!24 | |ontology_enrichment_uberon=UBERON:0000485!7.09e-19!11;UBERON:0003350!1.98e-16!9;UBERON:0004808!1.98e-16!9;UBERON:0001277!1.98e-16!9;UBERON:0001242!1.16e-10!13;UBERON:0000060!1.16e-10!13;UBERON:0001262!1.16e-10!13;UBERON:0004786!1.16e-10!13;UBERON:0000344!6.07e-09!15;UBERON:0000490!4.25e-08!66;UBERON:0004923!4.33e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.77e-39,9;UBERON:0004808,3.77e-39,9;UBERON:0001277,3.77e-39,9;UBERON:0000485,6.60e-32,11;UBERON:0001242,6.91e-27,13;UBERON:0001262,6.91e-27,13;UBERON:0004786,6.91e-27,13;UBERON:0000344,3.35e-23,15;UBERON:0004923,3.38e-14,24;UBERON:0003929,2.75e-13,55;UBERON:0000490,8.40e-11,66;UBERON:0000160,8.54e-11,31;UBERON:0005911,2.92e-10,69;UBERON:0002394,2.75e-07,1;UBERON:0001281,2.75e-07,1;UBERON:0000353,2.75e-07,1;UBERON:0003497,2.75e-07,1;UBERON:0003909,2.75e-07,1;UBERON:0003928,2.75e-07,1;UBERON:0003835,2.75e-07,1;UBERON:0003513,2.75e-07,1;UBERON:0001280,2.75e-07,1;UBERON:0004647,2.75e-07,1;UBERON:0002294,2.75e-07,1;UBERON:0001173,2.75e-07,1;UBERON:0004912,2.75e-07,1;UBERON:0005171,2.75e-07,1;UBERON:0005409,8.29e-07,47 | |||
|phase1_expression=0.160148847104794,3.48975407639361,0.909998478779072,4.23449895829562,2.50447864973174,4.53274034162102,3.73780224952841,0,0.140788722151667,0.234064526321993,0.171217968225505,0.239316476986009,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0.57423196411502,1.29228598847722,1.29282739611533,0,0,0,0,0,0,5.19932915552294,1.66234645358492,4.08338712524738,0,0,0.523523743973798,0.588231488031014,0,0,0,0.202753862439029,0,0.782391344348039,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,17.3918693221007,2.58127163094416,14.2793980078628,2.69851595818909,0,0,0,0,0,0,0.845060518660083,0,0,0,0.432982082022428,0.506719730950197,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.479260498023681,0,0.508280908292259,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0.556094498451196,0,0,0,0,0.51469581422943,0.568326998791185,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0.120625849856312,0,0,0,0,0,0,0,0,0,0,1.35982743995084,1.53946597556024,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,3.48975407639361,0.909998478779072,4.23449895829562,2.50447864973174,4.53274034162102,3.73780224952841,0,0.140788722151667,0.234064526321993,0.171217968225505,0.239316476986009,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0,0,0.57423196411502,1.29228598847722,1.29282739611533,0,0,0,0,0,0,5.19932915552294,1.66234645358492,4.08338712524738,0,0,0.523523743973798,0.588231488031014,0,0,0,0.202753862439029,0,0.782391344348039,0,0,0,0,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,17.3918693221007,2.58127163094416,14.2793980078628,2.69851595818909,0,0,0,0,0,0,0.845060518660083,0,0,0,0.432982082022428,0.506719730950197,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.479260498023681,0,0.508280908292259,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0.556094498451196,0,0,0,0,0.51469581422943,0.568326998791185,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0.164970122972535,0,0,0,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0.120625849856312,0,0,0,0,0,0,0,0,0,0,1.35982743995084,1.53946597556024,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:117307829..117307835,+ | |short_description=p@chr7:117307829..117307835,+ | ||
}} | }} |
Latest revision as of 01:03, 4 August 2015
Short description: | p@chr7:117307829..117307835, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:117307829..117307835, + |
Coexpression cluster: | MCL_coexpression_mm9:1793 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.77e-39 | 9 |
epithelial cell of alimentary canal | 3.77e-39 | 9 |
epithelial cell | 3.60e-36 | 25 |
endodermal cell | 6.25e-33 | 20 |
brush border epithelial cell | 1.95e-23 | 6 |
gut absorptive cell | 1.95e-23 | 6 |
enterocyte | 1.95e-23 | 6 |
endo-epithelial cell | 3.35e-23 | 15 |
columnar/cuboidal epithelial cell | 4.33e-20 | 7 |
intestinal crypt stem cell | 1.56e-17 | 3 |
hepatocyte | 4.75e-11 | 5 |
embryonic cell | 2.20e-08 | 70 |
M cell of gut | 7.57e-08 | 3 |
lining cell | 2.75e-07 | 1 |
meso-epithelial cell | 2.75e-07 | 1 |
endothelial cell | 2.75e-07 | 1 |
endothelial cell of sinusoid | 2.75e-07 | 1 |
endothelial cell of hepatic sinusoid | 2.75e-07 | 1 |
fibroblast | 8.98e-07 | 1 |
hepatic stellate cell | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.77e-39 | 9 |
gastrointestinal system epithelium | 3.77e-39 | 9 |
intestinal epithelium | 3.77e-39 | 9 |
simple columnar epithelium | 6.60e-32 | 11 |
intestinal mucosa | 6.91e-27 | 13 |
wall of intestine | 6.91e-27 | 13 |
gastrointestinal system mucosa | 6.91e-27 | 13 |
mucosa | 3.35e-23 | 15 |
organ component layer | 3.38e-14 | 24 |
gut epithelium | 2.75e-13 | 55 |
unilaminar epithelium | 8.40e-11 | 66 |
intestine | 8.54e-11 | 31 |
endo-epithelium | 2.92e-10 | 69 |
bile duct | 2.75e-07 | 1 |
hepatic sinusoid | 2.75e-07 | 1 |
parenchyma | 2.75e-07 | 1 |
abdomen blood vessel | 2.75e-07 | 1 |
sinusoid | 2.75e-07 | 1 |
digestive system duct | 2.75e-07 | 1 |
abdominal segment blood vessel | 2.75e-07 | 1 |
trunk blood vessel | 2.75e-07 | 1 |
liver parenchyma | 2.75e-07 | 1 |
liver lobule | 2.75e-07 | 1 |
biliary system | 2.75e-07 | 1 |
biliary tree | 2.75e-07 | 1 |
biliary bud | 2.75e-07 | 1 |
hepatic duct | 2.75e-07 | 1 |
gastrointestinal system | 8.29e-07 | 47 |