FFCP PHASE1:Hg19::chr15:56285742..56285866,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4734 | |EntrezGene=4734 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7727 | |HGNC=7727 | ||
|TSSclassifier=strong | |||
|UniProt=P46934 | |UniProt=P46934 | ||
|association_with_transcript=0bp_to_ENST00000435532,ENST00000502612,ENST00000508075,ENST00000557845,NM_006154,uc002adl.2_5end | |association_with_transcript=0bp_to_ENST00000435532,ENST00000502612,ENST00000508075,ENST00000557845,NM_006154,uc002adl.2_5end | ||
|cluster_id=chr15:56285742..56285866,- | |||
|description=CAGE_peak_1_at_NEDD4_5end | |description=CAGE_peak_1_at_NEDD4_5end | ||
|id=chr15:56285742..56285866,- | |id=chr15:56285742..56285866,- | ||
|ontology_enrichment_celltype=CL:0000066!2.41e-09!254 | |ontology_enrichment_celltype=CL:0000066!2.41e-09!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.25e-09,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.04e-15!235;DOID:14566!2.68e-15!239;DOID:0050687!4.60e-12!143;DOID:305!1.42e-08!106;DOID:7!2.71e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.12e-15,235;DOID:14566,2.78e-15,239;DOID:0050687,4.63e-12,143;DOID:305,1.43e-08,106;DOID:7,2.71e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.11e-13!155;UBERON:0001555!1.11e-13!155;UBERON:0007026!1.11e-13!155;UBERON:0004119!1.30e-13!169;UBERON:0000925!1.30e-13!169;UBERON:0006595!1.30e-13!169;UBERON:0000077!3.24e-09!130;UBERON:0004921!1.64e-08!129;UBERON:0004185!1.64e-08!129;UBERON:0005911!1.18e-07!82;UBERON:0003104!1.34e-07!238;UBERON:0009142!1.34e-07!238;UBERON:0003929!2.43e-07!54;UBERON:0003102!6.01e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.99e-12,160;UBERON:0000925,5.99e-12,160;UBERON:0006595,5.99e-12,160;UBERON:0001007,1.11e-11,145;UBERON:0001555,1.11e-11,145;UBERON:0007026,1.11e-11,145;UBERON:0005911,1.18e-07,82;UBERON:0003929,2.43e-07,54;UBERON:0003102,2.90e-07,99;UBERON:0004921,8.07e-07,118 | |||
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| ||
|short_description=p1@NEDD4 | |short_description=p1@NEDD4 | ||
}} | }} |
Latest revision as of 05:01, 18 September 2015
Short description: | p1@NEDD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEDD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000435532, ENST00000502612, ENST00000508075, ENST00000557845, NM_006154, uc002adl.2_5end |
EntrezGene: | NEDD4 |
HGNC: | 7727 |
UniProt: | P46934 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.25e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.99e-12 | 160 |
endoderm | 5.99e-12 | 160 |
presumptive endoderm | 5.99e-12 | 160 |
digestive system | 1.11e-11 | 145 |
digestive tract | 1.11e-11 | 145 |
primitive gut | 1.11e-11 | 145 |
endo-epithelium | 1.18e-07 | 82 |
gut epithelium | 2.43e-07 | 54 |
surface structure | 2.90e-07 | 99 |
subdivision of digestive tract | 8.07e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.12e-15 | 235 |
disease of cellular proliferation | 2.78e-15 | 239 |
cell type cancer | 4.63e-12 | 143 |
carcinoma | 1.43e-08 | 106 |
disease of anatomical entity | 2.71e-07 | 39 |