FFCP PHASE1:Hg19::chr15:63127608..63127626,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000558888,uc002ale.1_5end | |association_with_transcript=-12bp_to_ENST00000558888,uc002ale.1_5end | ||
|cluster_id=chr15:63127608..63127626,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_ENST00000558888_5end,CAGE_peak_2_at_uc002ale.1_5end | |description=CAGE_peak_2_at_ENST00000558888_5end,CAGE_peak_2_at_uc002ale.1_5end | ||
|id=chr15:63127608..63127626,- | |id=chr15:63127608..63127626,- | ||
|ontology_enrichment_celltype=CL:0002541!9.35e-11!3 | |ontology_enrichment_celltype=CL:0002541!9.35e-11!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.21e-40;1!UBERON:0005062;3.60e-11;4!UBERON:0007284;3.60e-11;4!UBERON:0004872;5.54e-07;7 | |||
|ontology_enrichment_disease=DOID:3112!1.32e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!2.96e-11!3;UBERON:0009751!2.96e-11!3;UBERON:0000946!2.96e-11!3;UBERON:0002523!2.96e-11!3;UBERON:0005983!2.96e-11!3;UBERON:0002165!2.96e-11!3;UBERON:0002062!2.96e-11!3;UBERON:0007280!2.96e-11!3;UBERON:0000476!9.35e-11!3;UBERON:0000920!9.35e-11!3;UBERON:0003124!5.40e-10!7;UBERON:0007100!8.90e-10!27;UBERON:0002146!3.87e-09!1;UBERON:0005623!3.87e-09!1;UBERON:0002079!4.52e-09!1;UBERON:0002135!5.28e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;2.70e-40;1!UBERON:0005623;2.70e-40;1!UBERON:0003978;1.96e-14;3!UBERON:0000946;1.96e-14;3!UBERON:0002107;2.04e-09;19!UBERON:0006925;2.04e-09;19!UBERON:0000948;3.27e-08;22!UBERON:0002423;2.17e-07;25!UBERON:0007100;2.43e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,2.21e-40,1;UBERON:0005623,2.21e-40,1;UBERON:0003978,1.83e-14,3;UBERON:0009751,1.83e-14,3;UBERON:0000946,1.83e-14,3;UBERON:0002523,1.83e-14,3;UBERON:0005983,1.83e-14,3;UBERON:0002165,1.83e-14,3;UBERON:0002062,1.83e-14,3;UBERON:0007280,1.83e-14,3;UBERON:0002107,2.08e-09,19;UBERON:0006925,2.08e-09,19;UBERON:0008836,2.08e-09,19;UBERON:0008835,2.93e-08,22;UBERON:0003894,2.93e-08,22;UBERON:0009854,6.08e-08,23;UBERON:0000948,1.27e-07,24;UBERON:0005498,1.27e-07,24;UBERON:0004140,1.27e-07,24;UBERON:0009881,1.27e-07,24;UBERON:0004141,1.27e-07,24;UBERON:0003084,1.27e-07,24;UBERON:0007005,1.27e-07,24;UBERON:0004139,1.27e-07,24;UBERON:0004291,1.27e-07,24;UBERON:0007499,2.20e-07,25;UBERON:0009497,2.20e-07,25;UBERON:0000015,2.20e-07,25;UBERON:0002423,2.20e-07,25;UBERON:0006235,2.20e-07,25;UBERON:0004161,2.20e-07,25;UBERON:0009856,3.90e-07,26;UBERON:0004797,6.04e-07,7;UBERON:0007100,7.03e-07,27 | |||
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|short_description=p2@ENST00000558888,p2@uc002ale.1 | |short_description=p2@ENST00000558888,p2@uc002ale.1 | ||
}} | }} |
Latest revision as of 03:10, 25 July 2015
Short description: | p2@ENST00000558888, p2@uc002ale.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000558888_5end, CAGE_peak_2_at_uc002ale.1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -12bp_to_ENST00000558888, uc002ale.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 2.21e-40 | 1 |
semi-lunar valve | 2.21e-40 | 1 |
valve | 1.83e-14 | 3 |
cardiac mesenchyme | 1.83e-14 | 3 |
cardial valve | 1.83e-14 | 3 |
tunica intima | 1.83e-14 | 3 |
heart layer | 1.83e-14 | 3 |
endocardium | 1.83e-14 | 3 |
endocardial cushion | 1.83e-14 | 3 |
presumptive endocardium | 1.83e-14 | 3 |
liver | 2.08e-09 | 19 |
digestive gland | 2.08e-09 | 19 |
liver bud | 2.08e-09 | 19 |
hepatic diverticulum | 2.93e-08 | 22 |
liver primordium | 2.93e-08 | 22 |
digestive tract diverticulum | 6.08e-08 | 23 |
heart | 1.27e-07 | 24 |
primitive heart tube | 1.27e-07 | 24 |
primary heart field | 1.27e-07 | 24 |
anterior lateral plate mesoderm | 1.27e-07 | 24 |
heart tube | 1.27e-07 | 24 |
heart primordium | 1.27e-07 | 24 |
cardiac mesoderm | 1.27e-07 | 24 |
cardiogenic plate | 1.27e-07 | 24 |
heart rudiment | 1.27e-07 | 24 |
epithelial sac | 2.20e-07 | 25 |
epithelium of foregut-midgut junction | 2.20e-07 | 25 |
anatomical boundary | 2.20e-07 | 25 |
hepatobiliary system | 2.20e-07 | 25 |
foregut-midgut junction | 2.20e-07 | 25 |
septum transversum | 2.20e-07 | 25 |
sac | 3.90e-07 | 26 |
blood vessel layer | 6.04e-07 | 7 |
primary circulatory organ | 7.03e-07 | 27 |