FFCP PHASE1:Hg19::chr11:17035393..17035410,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:17035393..17035410,- | |||
|description=CAGE_peak_at_chr11:17035393..17035410,- | |description=CAGE_peak_at_chr11:17035393..17035410,- | ||
|id=chr11:17035393..17035410,- | |id=chr11:17035393..17035410,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:1001319;9.91e-13;1!CL:1000600;9.91e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,1.25e-12,1;CL:1000600,1.25e-12,1 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.60e-12;1 | |||
|ontology_enrichment_disease=DOID:305!1.04e-12!106;DOID:0050687!5.39e-08!143 | |ontology_enrichment_disease=DOID:305!1.04e-12!106;DOID:0050687!5.39e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:3493;4.55e-07;2!DOID:4468;8.76e-07;2!DOID:4929;8.76e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.56e-07,2;DOID:4929,9.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.71e-26!115;UBERON:0001049!3.89e-17!57;UBERON:0005068!3.89e-17!57;UBERON:0006241!3.89e-17!57;UBERON:0007135!3.89e-17!57;UBERON:0003075!6.46e-16!86;UBERON:0007284!6.46e-16!86;UBERON:0002346!1.36e-14!90;UBERON:0002616!8.88e-14!59;UBERON:0005743!1.43e-13!86;UBERON:0001017!6.25e-13!82;UBERON:0000955!1.35e-12!69;UBERON:0006238!1.35e-12!69;UBERON:0000073!9.14e-12!94;UBERON:0001016!9.14e-12!94;UBERON:0004111!1.06e-11!241;UBERON:0000481!1.41e-11!347;UBERON:0003076!3.39e-11!15;UBERON:0003057!3.39e-11!15;UBERON:0000477!1.17e-10!286;UBERON:0000025!1.19e-10!194;UBERON:0000475!1.82e-10!365;UBERON:0000062!3.63e-10!511;UBERON:0000153!4.98e-10!129;UBERON:0007811!4.98e-10!129;UBERON:0005177!8.27e-10!107;UBERON:0003056!2.35e-09!61;UBERON:0000033!2.54e-09!123;UBERON:0000483!3.73e-09!309;UBERON:0000064!5.20e-09!219;UBERON:0003080!6.91e-09!42;UBERON:0002298!7.08e-09!8;UBERON:0000119!7.58e-09!312;UBERON:0004921!1.38e-08!129;UBERON:0004185!1.38e-08!129;UBERON:0004733!1.74e-08!12;UBERON:0002028!1.74e-08!12;UBERON:0007277!1.74e-08!12;UBERON:0001007!2.43e-08!155;UBERON:0001555!2.43e-08!155;UBERON:0007026!2.43e-08!155;UBERON:0002780!3.55e-08!41;UBERON:0001890!3.55e-08!41;UBERON:0006240!3.55e-08!41;UBERON:0004121!4.49e-08!169;UBERON:0004119!6.29e-08!169;UBERON:0000925!6.29e-08!169;UBERON:0006595!6.29e-08!169;UBERON:0004732!1.24e-07!13;UBERON:0002020!1.25e-07!34;UBERON:0003528!1.25e-07!34;UBERON:0000924!1.47e-07!173;UBERON:0006601!1.47e-07!173;UBERON:0000922!2.24e-07!612;UBERON:0002791!3.35e-07!33;UBERON:0000468!5.43e-07!659;UBERON:0000466!5.81e-07!126;UBERON:0001893!7.44e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;7.53e-16;3!UBERON:0005290;7.53e-16;3!UBERON:0000996;9.91e-13;1!UBERON:0004645;9.91e-13;1!UBERON:0001256;9.91e-13;1!UBERON:0001259;9.91e-13;1!UBERON:0007029;2.60e-12;1!UBERON:0004913;2.60e-12;1!UBERON:0003703;2.60e-12;1!UBERON:0001174;2.60e-12;1!UBERON:0004914;2.60e-12;1!UBERON:0002298;2.21e-08;6!UBERON:0000974;3.02e-08;6!UBERON:0002294;3.45e-07;7!UBERON:0001173;3.45e-07;7!UBERON:0001255;5.41e-07;2!UBERON:0001556;5.41e-07;2!UBERON:0000341;8.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,8.44e-16,3;UBERON:0005290,8.44e-16,3;UBERON:0010096,8.44e-16,3;UBERON:0000996,7.89e-13,1;UBERON:0004645,1.25e-12,1;UBERON:0001256,1.25e-12,1;UBERON:0001259,1.25e-12,1;UBERON:0007029,2.20e-12,1;UBERON:0004913,3.08e-12,1;UBERON:0003703,3.08e-12,1;UBERON:0001174,3.08e-12,1;UBERON:0004914,3.08e-12,1;UBERON:0002298,2.34e-08,6;UBERON:0001255,6.07e-07,2;UBERON:0001556,6.07e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0.245733936501509,0,0,0.527533956456907,0.123766352960047,0,0,0,0,0,0.369363174230364,0.612002073732759,0.626909442956176,0.85870796139317,0.273748850145768,0.87879847716362,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,1.41802225746102,0.443458794925128,0.263504357079378,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,1.77236972004421,0,0.491953754172454,0,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.671624264166535,0,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,1.02555725490326,0,0,0,0,0,0,0,0.422008249231538,0,0.329607748453519,0.211125408127993,0.398495976502139,0.552567831062295,0.251932747854276,0,0,0,0.0898683511473268,0.179021174675609,0,0.394573622547734,0,0,0,0.185536196323703,0,0.520855522170466,0.0874599999961957,0.724999575434793,0.227586896570999,0.762760950878299,0.472775363535873,0,0,0.173624994933292,0.885741385813839,0.482385754501632,0,0.442317039724898,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14262965711403,0.141353071433941,0,0.995261931078505,0.884575645033392,0,0,0,0,0.606610196826093,0.802577647298789,0.234264445725339,0,0.586993856796269,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0.391969589657511,0,0.52418000472609,0,0.0967563312890851,0,0,0.387956065953678,0.0882561266915003,0.451961481561065,0,0,0.0633107959558787,0.391102765469606,0,1.92107695265417,0,0.72045208577053,0,0,0,0,0.471388069233591,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.78741985211799,0,0,0.681017030557878,0,0,0.415440338029185,0,0,0.0607495566580247,0,0.709251365692784,0.472091293214983,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0.342173675768659,0.704815022316672,0,0.471612915298998,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,2.29363678276028,1.33114861844223,0.372578417648301,0,0.249960815924213,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.630893960010027,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0,0,0,1.07962490351128,0.235939446695481,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,1.18284868973636,0,0,0.620060389503552,0.19024743058172,0,0,0,0,0.255524855279191,0,0.672567444437648,0,0,0.354809480650555,0,0,0.0679697329768317,0,0,0.333694205676207,0.470958557103084,0,0,0,0,0,0.78624198594322,0.47404083519818,1.74362138052188,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0.22910686854405,0,0,0.782988022584546,0.588901401691458,4.3890452993617,0,0.102662806856247,0,1.45713297917742,0.935757853848423,0,0,0.45178432815584,0,0.150962843566674,0.771741581079447,0.437119121007915,2.35158648180761,0.980593287015622,0.235676547101626,0.392616934229891,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0.160482733378337,1.46067277649303,0,0.430018749454354,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0.303114792872958,0,0.829169439458779,0.103432995861895,1.0661699095049,0.23806443146374,0.0645889098360061,0,0.112131862580613,0.12729431655633,0,0.217716747896961,0,0.134704106029175,0.932388670104793,0,2.03508171527436,0,0,0.0898252021065869,0,0.244482888365733,0,2.66302709674205,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0.245733936501509,0,0,0.527533956456907,0.123766352960047,0,0,0,0,0,0.369363174230364,0.612002073732759,0.626909442956176,0.85870796139317,0.273748850145768,0.87879847716362,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,1.41802225746102,0.443458794925128,0.263504357079378,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,1.77236972004421,0,0.491953754172454,0,0,0,0,0.0925884451585296,0,0,0,0.34779121492523,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.671624264166535,0,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,1.02555725490326,0,0,0,0,0,0,0,0.422008249231538,0,0.329607748453519,0.211125408127993,0.398495976502139,0.552567831062295,0.251932747854276,0,0,0,0.0898683511473268,0.179021174675609,0,0.394573622547734,0,0,0,0.185536196323703,0,0.520855522170466,0.0874599999961957,0.724999575434793,0.227586896570999,0.762760950878299,0.472775363535873,0,0,0.173624994933292,0.885741385813839,0.482385754501632,0,0.442317039724898,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14262965711403,0.141353071433941,0,0.995261931078505,0.884575645033392,0,0,0,0,0.606610196826093,0.802577647298789,0.234264445725339,0,0.586993856796269,0,0.394584402849391,0,0,0.063186579628488,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0.391969589657511,0,0.52418000472609,0,0.0967563312890851,0,0,0.387956065953678,0.0882561266915003,0.451961481561065,0,0,0.0633107959558787,0.391102765469606,0,1.92107695265417,0,0.72045208577053,0,0,0,0,0.471388069233591,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.78741985211799,0,0,0.681017030557878,0,0,0.415440338029185,0,0,0.0607495566580247,0,0.709251365692784,0.472091293214983,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.26446520348538,0.342173675768659,0.704815022316672,0,0.471612915298998,0.414239055347196,0,0.197611631897944,0,0,0,0,0,0,0.314108192500469,0,0,0.1251909307065,2.29363678276028,1.33114861844223,0.372578417648301,0,0.249960815924213,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.630893960010027,0,0,0,0.192687675289379,0,0,0.205116364240755,0,0,0,0,1.07962490351128,0.235939446695481,0,0,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,1.18284868973636,0,0,0.620060389503552,0.19024743058172,0,0,0,0,0.255524855279191,0,0.672567444437648,0,0,0.354809480650555,0,0,0.0679697329768317,0,0,0.333694205676207,0.470958557103084,0,0,0,0,0,0.78624198594322,0.47404083519818,1.74362138052188,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0.22910686854405,0,0,0.782988022584546,0.588901401691458,4.3890452993617,0,0.102662806856247,0,1.45713297917742,0.935757853848423,0,0,0.45178432815584,0,0.150962843566674,0.771741581079447,0.437119121007915,2.35158648180761,0.980593287015622,0.235676547101626,0.392616934229891,0.594092800654172,0.4226557275834,0,0,0,0,0,0,0.160482733378337,1.46067277649303,0,0.430018749454354,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0.303114792872958,0,0.829169439458779,0.103432995861895,1.0661699095049,0.23806443146374,0.0645889098360061,0,0.112131862580613,0.12729431655633,0,0.217716747896961,0,0.134704106029175,0.932388670104793,0,2.03508171527436,0,0,0.0898252021065869,0,0.244482888365733,0,2.66302709674205,0.402547587182052,0 | ||
|short_description=p@chr11:17035393..17035410,- | |short_description=p@chr11:17035393..17035410,- | ||
}} | }} |
Latest revision as of 20:25, 23 July 2015
Short description: | p@chr11:17035393..17035410, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:17035393..17035410, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 1.25e-12 | 1 |
lower urinary tract cell | 1.25e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 8.44e-16 | 3 |
myelencephalon | 8.44e-16 | 3 |
future myelencephalon | 8.44e-16 | 3 |
vagina | 7.89e-13 | 1 |
urinary bladder urothelium | 1.25e-12 | 1 |
wall of urinary bladder | 1.25e-12 | 1 |
mucosa of urinary bladder | 1.25e-12 | 1 |
surface | 2.20e-12 | 1 |
hepatopancreatic ampulla | 3.08e-12 | 1 |
extrahepatic bile duct | 3.08e-12 | 1 |
common bile duct | 3.08e-12 | 1 |
duodenal papilla | 3.08e-12 | 1 |
brainstem | 2.34e-08 | 6 |
urinary bladder | 6.07e-07 | 2 |
lower urinary tract | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.56e-07 | 2 |
tubular adenocarcinoma | 9.54e-07 | 2 |