FFCP PHASE1:Hg19::chr11:27494329..27494347,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55366 | |EntrezGene=55366 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13299 | |HGNC=13299 | ||
|TSSclassifier=strong | |||
|UniProt=Q59ER8,Q9BXB1 | |UniProt=Q59ER8,Q9BXB1 | ||
|association_with_transcript=0bp_to_NM_018490,uc001mrj.3,uc001mrk.3_5end | |association_with_transcript=0bp_to_NM_018490,uc001mrj.3,uc001mrk.3_5end | ||
|cluster_id=chr11:27494329..27494347,- | |||
|coexpression_cluster_id=C2125 | |||
|description=CAGE_peak_1_at_LGR4_5end | |description=CAGE_peak_1_at_LGR4_5end | ||
|id=chr11:27494329..27494347,- | |id=chr11:27494329..27494347,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.56e-09!143;DOID:305!9.37e-08!106 | |ontology_enrichment_disease=DOID:0050687!1.56e-09!143;DOID:305!9.37e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.89e-08,143;DOID:305,3.05e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000062!1.33e-17!511;UBERON:0000468!3.65e-13!659;UBERON:0000481!1.01e-11!347;UBERON:0000467!6.23e-11!625;UBERON:0000480!8.55e-11!626;UBERON:0000924!1.24e-10!173;UBERON:0006601!1.24e-10!173;UBERON:0004121!1.85e-10!169;UBERON:0001048!9.70e-10!168;UBERON:0000922!1.15e-09!612;UBERON:0000475!1.38e-08!365;UBERON:0002050!7.95e-08!605;UBERON:0005423!7.95e-08!605;UBERON:0000923!1.04e-07!604;UBERON:0005291!1.04e-07!604;UBERON:0006598!1.04e-07!604;UBERON:0002532!1.04e-07!604;UBERON:0000033!1.22e-07!123;UBERON:0000064!2.97e-07!219;UBERON:0000153!5.16e-07!129;UBERON:0007811!5.16e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000991;7.96e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.88e-10,171;UBERON:0000924,1.88e-10,171;UBERON:0006601,1.88e-10,171;UBERON:0001048,1.07e-09,160;UBERON:0010314,7.62e-08,132;UBERON:0011216,2.68e-07,223;UBERON:0004176,6.15e-07,22;UBERON:0000991,9.26e-07,21;UBERON:0009196,9.26e-07,21;UBERON:0009117,9.26e-07,21;UBERON:0005564,9.26e-07,21 | |||
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| ||
|short_description=p1@LGR4 | |short_description=p1@LGR4 | ||
}} | }} |
Latest revision as of 12:13, 17 September 2015
Short description: | p1@LGR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LGR4_5end |
Coexpression cluster: | C2125_gastric_signet_Lens_Ciliary_lung_Hepatocyte_kidney |
Association with transcript: | 0bp_to_NM_018490, uc001mrj.3, uc001mrk.3_5end |
EntrezGene: | LGR4 |
HGNC: | 13299 |
UniProt: | Q59ER8Q9BXB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.88e-10 | 171 |
ectoderm | 1.88e-10 | 171 |
presumptive ectoderm | 1.88e-10 | 171 |
primordium | 1.07e-09 | 160 |
structure with developmental contribution from neural crest | 7.62e-08 | 132 |
organ system subdivision | 2.68e-07 | 223 |
external genitalia | 6.15e-07 | 22 |
gonad | 9.26e-07 | 21 |
indifferent external genitalia | 9.26e-07 | 21 |
indifferent gonad | 9.26e-07 | 21 |
gonad primordium | 9.26e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.89e-08 | 143 |
carcinoma | 3.05e-07 | 106 |