FFCP PHASE1:Mm9::chr8:108461946..108462034,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19171 | |EntrezGene=19171 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2917 | |||
|TSSclassifier=NA | |||
|UniProt=O35955 | |UniProt=O35955 | ||
|association_with_transcript=257bp_to_ENSMUST00000034369,NM_013640,uc009nep.2_5end | |association_with_transcript=257bp_to_ENSMUST00000034369,NM_013640,uc009nep.2_5end | ||
|cluster_id=chr8:108461946..108462034,- | |||
|description=CAGE_peak_1_at_Psmb10_5end | |description=CAGE_peak_1_at_Psmb10_5end | ||
|id=chr8:108461946..108462034,- | |id=chr8:108461946..108462034,- | ||
|ontology_enrichment_celltype=CL:0000063!1.61e-12!66;CL:0000219!8.24e-10!54;CL:0002320!3.83e-09!46;CL:0000134!3.83e-09!46;CL:0002563!8.39e-07!9;CL:0002251!8.39e-07!9;CL:0000144!9.83e-07!121;CL:0000012!9.83e-07!121 | |ontology_enrichment_celltype=CL:0000063!1.61e-12!66;CL:0000219!8.24e-10!54;CL:0002320!3.83e-09!46;CL:0000134!3.83e-09!46;CL:0002563!8.39e-07!9;CL:0002251!8.39e-07!9;CL:0000144!9.83e-07!121;CL:0000012!9.83e-07!121 | ||
|ontology_enrichment_celltype_v019_2=CL:0000219,7.84e-10,54;CL:0002320,3.64e-09,46;CL:0000134,3.64e-09,46;CL:0002563,8.39e-07,9;CL:0002251,8.39e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!5.43e-15!70;UBERON:0001007!1.35e-14!128;UBERON:0001555!1.35e-14!128;UBERON:0007026!1.35e-14!128;UBERON:0004119!6.91e-14!130;UBERON:0000925!6.91e-14!130;UBERON:0006595!6.91e-14!130;UBERON:0004921!1.34e-13!126;UBERON:0004185!1.34e-13!126;UBERON:0002193!9.12e-13!48;UBERON:0000490!3.01e-12!66;UBERON:0002390!2.23e-11!45;UBERON:0003061!2.23e-11!45;UBERON:0003929!3.16e-11!55;UBERON:0000344!1.39e-10!15;UBERON:0005911!1.74e-10!69;UBERON:0001242!1.90e-09!13;UBERON:0000060!1.90e-09!13;UBERON:0001262!1.90e-09!13;UBERON:0004786!1.90e-09!13;UBERON:0002384!3.83e-09!46;UBERON:0004923!5.58e-08!24;UBERON:0005057!6.32e-08!51;UBERON:0005409!4.25e-07!59;UBERON:0000160!4.32e-07!43;UBERON:0002371!4.60e-07!16;UBERON:0003350!8.39e-07!9;UBERON:0004808!8.39e-07!9;UBERON:0001277!8.39e-07!9 | |ontology_enrichment_uberon=UBERON:0002405!5.43e-15!70;UBERON:0001007!1.35e-14!128;UBERON:0001555!1.35e-14!128;UBERON:0007026!1.35e-14!128;UBERON:0004119!6.91e-14!130;UBERON:0000925!6.91e-14!130;UBERON:0006595!6.91e-14!130;UBERON:0004921!1.34e-13!126;UBERON:0004185!1.34e-13!126;UBERON:0002193!9.12e-13!48;UBERON:0000490!3.01e-12!66;UBERON:0002390!2.23e-11!45;UBERON:0003061!2.23e-11!45;UBERON:0003929!3.16e-11!55;UBERON:0000344!1.39e-10!15;UBERON:0005911!1.74e-10!69;UBERON:0001242!1.90e-09!13;UBERON:0000060!1.90e-09!13;UBERON:0001262!1.90e-09!13;UBERON:0004786!1.90e-09!13;UBERON:0002384!3.83e-09!46;UBERON:0004923!5.58e-08!24;UBERON:0005057!6.32e-08!51;UBERON:0005409!4.25e-07!59;UBERON:0000160!4.32e-07!43;UBERON:0002371!4.60e-07!16;UBERON:0003350!8.39e-07!9;UBERON:0004808!8.39e-07!9;UBERON:0001277!8.39e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,8.94e-18,116;UBERON:0001555,8.94e-18,116;UBERON:0007026,8.94e-18,116;UBERON:0004119,6.36e-17,118;UBERON:0000925,6.36e-17,118;UBERON:0006595,6.36e-17,118;UBERON:0004921,1.13e-16,114;UBERON:0002193,8.59e-13,48;UBERON:0002405,8.59e-13,48;UBERON:0000490,2.86e-12,66;UBERON:0000160,3.71e-12,31;UBERON:0002390,2.10e-11,45;UBERON:0003061,2.10e-11,45;UBERON:0003929,3.00e-11,55;UBERON:0005409,9.07e-11,47;UBERON:0000344,1.39e-10,15;UBERON:0005911,1.66e-10,69;UBERON:0001242,1.90e-09,13;UBERON:0001262,1.90e-09,13;UBERON:0004786,1.90e-09,13;UBERON:0002384,3.64e-09,46;UBERON:0004923,5.58e-08,24;UBERON:0002371,4.60e-07,16;UBERON:0003350,8.39e-07,9;UBERON:0004808,8.39e-07,9;UBERON:0001277,8.39e-07,9 | |||
|phase1_expression=3.68342348341026,122.141392673776,130.129782465407,83.7825865319919,91.1630228502352,59.2613829848971,60.7392865548367,57.4598789315014,10.6999428835267,7.0219357896598,5.82141091966717,3.35043067780413,42.9713832127326,53.1516046707504,11.9919514253639,12.5534665781692,4.19737126876888,52.2089883667883,44.2879620546536,53.4730961265518,15.1377056468904,36.7376519443276,30.0379757509776,75.6764159812814,82.357931903114,179.160372803886,150.335936659517,117.43182181381,128.835878391421,213.217489776901,144.790023457914,3.81018404075779,3.69038872550742,0,84.3446729673722,102.400541540831,88.6095006178682,16.7412652294763,50.0054620495232,25.6526634547161,13.5293242247133,15.0270006690858,16.9928623560904,18.6327290603854,18.5519784131712,9.17733760808408,35.9900018400098,11.9913836009246,16.4764637050854,12.2490836416799,15.6784792220406,15.8127820801469,39.2611298175103,28.2891235384424,33.9454737133889,13.3774906738692,15.7593391966316,20.6268836910977,1.41621522601718,0.528990979272033,1.90149421051854,16.2645375393183,31.1253178638899,101.688668052798,89.9868389935947,121.492099655783,30.5592112728773,29.9690278150813,0.829516898467821,1.35005938331691,0.630974884054146,5.99867067247988,8.1721360152097,0.61245399607477,1.0543001812006,0.919218786610021,6.60695285996332,5.74593021383345,6.29786786350598,1.58263545276233,1.73826522844578,2.6045668527838,6.97957497503452,12.9435400307286,6.57032465440283,4.71405736757868,6.97621235915604,2.42319279572891,6.58817881998701,4.1564358058732,27.8269909153611,31.8356834483113,19.7191686775248,14.5719861742211,12.9955283489534,15.6809410484067,14.6062196937022,6.64678258054425,10.6512261887176,7.42013106471715,3.38024207464033,3.84979432242953,10.1922095882658,0,6.49473123033642,5.06719730950197,5.56076889516262,24.777901899036,30.0367945030719,14.398887489288,6.07198643681475,6.39377504455497,5.30415643688935,8.74191315205211,6.93773372100658,10.3046604890334,2.47194967734374,12.4355446951124,12.3845477272982,2.75003644910596,6.62524555381181,6.78825354389311,22.3670113461747,2.34224637609238,1.46612694769419,84.8117423292523,56.9121841403121,60.5901758303342,61.7561303575094,3.74476598512057,4.57500602818627,0.628271760564322,5.38855392596057,3.83573185995496,3.74018480207208,3.40706652442291,6.21220119486929,11.1966273549084,5.55990068554084,3.15662783829711,1.56144531555244,1.83921683546778,1.0803727788321,1.20563854268572,1.63287597963187,2.0498195245576,2.15513966487376,3.88055056108524,0.646703978798527,0.945530400839096,1.05570674498369,3.28793598641362,1.94633074457919,2.43776516565517,3.90986059175093,2.58744546864041,54.0704154231191,42.462404673928,59.1060078742833,1.65700618028402,2.34526059981096,3.24111710629827,2.60419209143731,4.13204886669548,3.85667782218446,3.95307706075693,4.56064782379353,5.95503246072564,5.10135534731789,8.37254066803386,6.80978000185188,9.64919917007193,13.3925570327541,8.72341721942416,5.04695876553905,2.26390147234426,93.178096801431,35.7008264995785,2.98603550749328,2.55460339046482,6.44337306610467,12.3026950020239,14.0098167622268,24.7293313946327,63.11236518542,32.4456940806301,30.1602250560323,32.0319919986253,33.7287870716078,66.5126362404124,65.2736910621577,57.5518279705121,1.51734320762465,2.74196430263349,3.38123207019241,4.07302655690629,3.10323979468201,3.15611189506434,4.99568643281633,5.01874503130647,6.59394656933774,6.16985819609003,24.9020206753205,3.83743743147016,4.12773889737726,8.31989815823959,8.72298521970563,6.51178331331525,12.4766667372896,12.3709339103849,10.3766545136023,18.1210532704134,14.3768206527355,26.4220072844637,16.8500343481863,18.185679212192,14.1723956682311,9.64887042726734,28.2672380954905,4.16881105895066,2.60743962307241,4.58311731593008,3.52035372432753,7.03526281255626,4.76087281772027,8.00047956216975,9.14283835815908,13.2878813789265,9.72674088810671,22.4492741160561,27.2842271348115,26.7600758375796,75.3956419696361,215.930556476028,6.88469982226651,10.7615331058846,4.0137647496948,4.10240903072711,3.11476396215683,5.55436039849621,5.04813151066011,7.41833614163613,4.73931475012158,8.12493913038677,6.90675889655422,7.92614286208731,4.04810701674894,7.01414058987149,6.32460444714438,5.14114106274891,7.66476460124651,5.69809931735217,3.90928702448583,9.73323725537959,3.98235415019888,3.39892890616974,5.13950046840077,2.45186603682668,5.02013217897314,7.37844355065426,15.247269296925,3.99887102425256,4.27796854061666,4.74055136903724,3.16255825724996,4.12542172992747,7.48967132658334,0.720244376125241,3.23396709456886,3.00071849044229,4.61084607469911,3.56737635204141,5.26556865926787,9.74287837166718,5.16277757740163,1.90648863777438,5.29268155331909,5.11147384118588,3.22928853391811,2.29189114726992,2.50681922406587,1.96969079694074,51.0091464102239,4.63563255026274,20.6753765765402,10.5257302661243,11.4820606969221,10.9253705062721,14.3528939107076,21.7339264546196,37.2252761686543,39.0464551983006,33.7207936082794,5.72802370809068,1.42351197111511,3.0497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| ||
|short_description=p1@Psmb10 | |short_description=p1@Psmb10 | ||
}} | }} |
Latest revision as of 07:53, 27 September 2015
Short description: | p1@Psmb10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Psmb10_5end |
Coexpression cluster: | MCL_coexpression_mm9:2917 |
Association with transcript: | 257bp_to_ENSMUST00000034369, NM_013640, uc009nep.2_5end |
EntrezGene: | Psmb10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 7.84e-10 | 54 |
connective tissue cell | 3.64e-09 | 46 |
mesenchymal cell | 3.64e-09 | 46 |
intestinal epithelial cell | 8.39e-07 | 9 |
epithelial cell of alimentary canal | 8.39e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
digestive system | 8.94e-18 | 116 |
digestive tract | 8.94e-18 | 116 |
primitive gut | 8.94e-18 | 116 |
endoderm-derived structure | 6.36e-17 | 118 |
endoderm | 6.36e-17 | 118 |
presumptive endoderm | 6.36e-17 | 118 |
subdivision of digestive tract | 1.13e-16 | 114 |
hemolymphoid system | 8.59e-13 | 48 |
immune system | 8.59e-13 | 48 |
unilaminar epithelium | 2.86e-12 | 66 |
intestine | 3.71e-12 | 31 |
hematopoietic system | 2.10e-11 | 45 |
blood island | 2.10e-11 | 45 |
gut epithelium | 3.00e-11 | 55 |
gastrointestinal system | 9.07e-11 | 47 |
mucosa | 1.39e-10 | 15 |
endo-epithelium | 1.66e-10 | 69 |
intestinal mucosa | 1.90e-09 | 13 |
wall of intestine | 1.90e-09 | 13 |
gastrointestinal system mucosa | 1.90e-09 | 13 |
connective tissue | 3.64e-09 | 46 |
organ component layer | 5.58e-08 | 24 |
bone marrow | 4.60e-07 | 16 |
epithelium of mucosa | 8.39e-07 | 9 |
gastrointestinal system epithelium | 8.39e-07 | 9 |
intestinal epithelium | 8.39e-07 | 9 |