FFCP PHASE1:Hg19::chr11:61124266..61124283,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=220002 | |EntrezGene=220002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23014 | |HGNC=23014 | ||
|TSSclassifier=strong | |||
|UniProt=F5H832 | |UniProt=F5H832 | ||
|association_with_transcript=0bp_to_ENST00000539890_5end | |association_with_transcript=0bp_to_ENST00000539890_5end | ||
|cluster_id=chr11:61124266..61124283,- | |||
|coexpression_cluster_id=C1344 | |||
|description=CAGE_peak_4_at_CYBASC3_5end | |description=CAGE_peak_4_at_CYBASC3_5end | ||
|id=chr11:61124266..61124283,- | |id=chr11:61124266..61124283,- | ||
|ontology_enrichment_celltype=CL:0000738!6.65e-33!140;CL:0000945!1.17e-32!24;CL:0000826!1.17e-32!24;CL:0002087!2.24e-25!119;CL:0000236!6.76e-25!14;CL:0000037!2.55e-23!172;CL:0000566!2.55e-23!172;CL:0000542!5.12e-22!53;CL:0000051!5.12e-22!53;CL:0000988!4.82e-21!182;CL:0000838!9.66e-21!52;CL:0002031!6.35e-20!124;CL:0002032!2.10e-19!165;CL:0000837!2.10e-19!165;CL:0000451!2.02e-09!10;CL:0000784!3.70e-07!3 | |ontology_enrichment_celltype=CL:0000738!6.65e-33!140;CL:0000945!1.17e-32!24;CL:0000826!1.17e-32!24;CL:0002087!2.24e-25!119;CL:0000236!6.76e-25!14;CL:0000037!2.55e-23!172;CL:0000566!2.55e-23!172;CL:0000542!5.12e-22!53;CL:0000051!5.12e-22!53;CL:0000988!4.82e-21!182;CL:0000838!9.66e-21!52;CL:0002031!6.35e-20!124;CL:0002032!2.10e-19!165;CL:0000837!2.10e-19!165;CL:0000451!2.02e-09!10;CL:0000784!3.70e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.06e-39;13!CL:0000945;6.87e-36;24!CL:0000784;1.37e-12;3!CL:0000542;3.62e-12;53!CL:0000226;4.93e-11;3!CL:0000842;4.93e-11;3!CL:0000767;2.54e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.18e-36,14;CL:0000945,6.12e-36,24;CL:0000826,6.12e-36,24;CL:0000738,5.80e-19,136;CL:0000542,4.70e-16,53;CL:0000051,4.70e-16,53;CL:0000838,2.18e-14,52;CL:0000037,7.19e-14,168;CL:0002087,2.86e-13,115;CL:0000988,8.96e-13,177;CL:0000784,1.37e-12,3;CL:0000226,4.60e-11,3;CL:0000842,4.60e-11,3;CL:0000767,1.75e-10,3;CL:0002032,1.98e-09,161;CL:0000837,1.98e-09,161;CL:0002031,3.94e-08,120 | |||
|ontology_enrichment_development_v019=CL:0000051;3.62e-12;53!UBERON:0004872;2.45e-08;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.16e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.14e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.90e-16!15;UBERON:0000179!3.90e-16!15;UBERON:0000463!3.90e-16!15;UBERON:0002390!2.10e-13!102;UBERON:0003061!2.10e-13!102;UBERON:0002193!3.79e-13!112;UBERON:0007023!1.41e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.78e-31;15!UBERON:0000179;1.78e-31;15!UBERON:0000463;1.78e-31;15!UBERON:0002390;4.12e-25;32!UBERON:0004177;4.26e-17;5!UBERON:0005057;4.26e-17;5!UBERON:0002193;1.99e-15;42!UBERON:0002106;3.29e-11;3!UBERON:0002370;1.35e-07;2!UBERON:0005058;1.35e-07;2!UBERON:0009113;1.35e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.73e-31,15;UBERON:0000179,1.73e-31,15;UBERON:0000463,1.73e-31,15;UBERON:0004177,3.66e-12,7;UBERON:0005057,3.66e-12,7;UBERON:0002390,1.22e-11,98;UBERON:0003061,1.22e-11,98;UBERON:0002193,2.72e-11,108;UBERON:0002106,3.86e-11,3;UBERON:0004854,3.86e-11,3;UBERON:0009034,3.86e-11,3;UBERON:0002095,3.86e-11,3;UBERON:0004782,3.86e-11,3;UBERON:0003281,3.86e-11,3;UBERON:0009664,3.86e-11,3;UBERON:0002296,3.86e-11,3;UBERON:0005602,3.86e-11,3;UBERON:0001179,3.86e-11,3;UBERON:0006293,3.86e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.656804715599566,0.629686250509434,1.57345710739562,1.53531759238885,1.85779347979291,0,0,0,3.09868802321207,1.9903692548239,0,0,0.200544447470142,0,0.223915474239924,0.647787332037959,0,0,0.755751887377619,0,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0.545812300115692,0.449446968890169,0,1.28371610830437,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,103.83778423218,110.319999474951,102.293564194309,73.8243285040057,104.903748603435,106.329201391579,131.547929684188,88.7269991717889,54.6444450345071,21.7277760067247,30.9641314781435,0,0,0.790152254325231,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.296573126324121,1.07016331235885,1.04535523804977,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,179.344949477617,197.338244219144,150.068830537144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,4.01805673145701,8.43335757932127,0,0,0,0,0,0,0,0.985153801009636,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16920065307218,3.23571301227925,2.66818894508611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,9.64150457541122,5.35246044999663,9.68400218196076,9.76750279376935,12.3408681925858,2.59389324477087,9.18053443304795,7.13812658664843,0,0,0,14.8642540100575,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90709788827869,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,2.3948309234694,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,2.55436704901932,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,2.07119527673598,0.992332043623902,0,99.9917232707156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89720617678777,0.398594520940089,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.177404740325278,0.576169937778896,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,7.23676168444873,16.6301350971829,1.09935271517422,0,0,0,0,1.83491713361816,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.803892390468535,0,0,1.49263787330687,0.476128862927481,2.77732312294826,1.73809200028402,0,0,0,0,0.684466602170562,12.729538019757,0.286888821570705,0,0,0,0,0,0,0,0,0,12.6802489962347,3.20568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.656804715599566,0.629686250509434,1.57345710739562,1.53531759238885,1.85779347979291,0,0,0,3.09868802321207,1.9903692548239,0,0,0.200544447470142,0,0.223915474239924,0.647787332037959,0,0,0.755751887377619,0,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0.545812300115692,0.449446968890169,0,1.28371610830437,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0.182664153764634,103.83778423218,110.319999474951,102.293564194309,73.8243285040057,104.903748603435,106.329201391579,131.547929684188,88.7269991717889,54.6444450345071,21.7277760067247,30.9641314781435,0,0,0.790152254325231,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.296573126324121,1.07016331235885,1.04535523804977,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,179.344949477617,197.338244219144,150.068830537144,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.253991577168676,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,4.01805673145701,8.43335757932127,0,0,0,0,0,0,0,0.985153801009636,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16920065307218,3.23571301227925,2.66818894508611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,9.64150457541122,5.35246044999663,9.68400218196076,9.76750279376935,12.3408681925858,2.59389324477087,9.18053443304795,7.13812658664843,0,0,0,14.8642540100575,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90709788827869,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,2.3948309234694,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22206028986725,0,0,0,0,0,0,2.55436704901932,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,2.07119527673598,0.992332043623902,0,99.9917232707156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89720617678777,0.398594520940089,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.177404740325278,0.576169937778896,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,7.23676168444873,16.6301350971829,1.09935271517422,0,0,0,0,1.83491713361816,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.803892390468535,0,0,1.49263787330687,0.476128862927481,2.77732312294826,1.73809200028402,0,0,0,0,0.684466602170562,12.729538019757,0.286888821570705,0,0,0,0,0,0,0,0,0,12.6802489962347,3.20568492303233 | ||
|short_description=p4@CYBASC3 | |short_description=p4@CYBASC3 | ||
}} | }} |
Latest revision as of 15:45, 18 September 2015
Short description: | p4@CYBASC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CYBASC3_5end |
Coexpression cluster: | C1344_Dendritic_lymphoma_CD19_diffuse_adult_Neutrophils_lymphangiectasia |
Association with transcript: | 0bp_to_ENST00000539890_5end |
EntrezGene: | CYBASC3 |
HGNC: | 23014 |
UniProt: | F5H832 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.18e-36 | 14 |
lymphocyte of B lineage | 6.12e-36 | 24 |
pro-B cell | 6.12e-36 | 24 |
leukocyte | 5.80e-19 | 136 |
lymphocyte | 4.70e-16 | 53 |
common lymphoid progenitor | 4.70e-16 | 53 |
lymphoid lineage restricted progenitor cell | 2.18e-14 | 52 |
hematopoietic stem cell | 7.19e-14 | 168 |
nongranular leukocyte | 2.86e-13 | 115 |
hematopoietic cell | 8.96e-13 | 177 |
plasmacytoid dendritic cell | 1.37e-12 | 3 |
single nucleate cell | 4.60e-11 | 3 |
mononuclear cell | 4.60e-11 | 3 |
basophil | 1.75e-10 | 3 |
hematopoietic oligopotent progenitor cell | 1.98e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.98e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 3.94e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 1.73e-31 | 15 |
haemolymphatic fluid | 1.73e-31 | 15 |
organism substance | 1.73e-31 | 15 |
hemopoietic organ | 3.66e-12 | 7 |
immune organ | 3.66e-12 | 7 |
hematopoietic system | 1.22e-11 | 98 |
blood island | 1.22e-11 | 98 |
hemolymphoid system | 2.72e-11 | 108 |
spleen | 3.86e-11 | 3 |
gastrointestinal system mesentery | 3.86e-11 | 3 |
stomach region | 3.86e-11 | 3 |
mesentery | 3.86e-11 | 3 |
gastrointestinal system serosa | 3.86e-11 | 3 |
mesentery of stomach | 3.86e-11 | 3 |
gut mesentery | 3.86e-11 | 3 |
dorsal mesentery | 3.86e-11 | 3 |
dorsal mesogastrium | 3.86e-11 | 3 |
peritoneal cavity | 3.86e-11 | 3 |
spleen primordium | 3.86e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.14e-08 | 10 |