FFCP PHASE1:Hg19::chr16:70557193..70557205,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23450 | |EntrezGene=23450 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10770 | |HGNC=10770 | ||
|TSSclassifier=strong | |||
|UniProt=Q15393,A8K6V3 | |UniProt=Q15393,A8K6V3 | ||
|association_with_transcript=-485bp_to_ENST00000302516,NM_012426,uc002ezf.2_5end | |association_with_transcript=-485bp_to_ENST00000302516,NM_012426,uc002ezf.2_5end | ||
|cluster_id=chr16:70557193..70557205,+ | |||
|description=CAGE_peak_4_at_SF3B3_5end | |description=CAGE_peak_4_at_SF3B3_5end | ||
|id=chr16:70557193..70557205,+ | |id=chr16:70557193..70557205,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.91e-10!254;CL:0002322!8.17e-07!5 | |ontology_enrichment_celltype=CL:0000066!2.91e-10!254;CL:0002322!8.17e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000123;2.37e-10;2!CL:0000242;2.37e-10;2!CL:0000095;3.57e-09;17!CL:0000322;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.57e-10,2;CL:0000095,3.33e-09,17;CL:0000123,3.33e-09,17;CL:0000322,2.47e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.67e-07;10!UBERON:0003056;2.55e-07;3 | |||
|ontology_enrichment_disease=DOID:14566!7.05e-15!239;DOID:162!1.76e-14!235;DOID:0050687!7.39e-12!143;DOID:305!3.94e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.37e-10;2!DOID:3093;5.98e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.27e-10,2;DOID:3093,6.35e-07,11 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;2.37e-10;2!UBERON:0002173;2.37e-10;2!UBERON:0002186;2.37e-10;2!UBERON:0000490;1.70e-08;33!UBERON:0000487;5.32e-08;22!UBERON:0004821;2.55e-07;3!UBERON:0007499;2.55e-07;3!UBERON:0003215;2.55e-07;3!UBERON:0010368;2.55e-07;3!UBERON:0009911;2.55e-07;3!UBERON:0002299;2.55e-07;3!UBERON:0006524;2.55e-07;3!UBERON:0008874;2.55e-07;3!UBERON:0002169;2.55e-07;3!UBERON:0004894;2.55e-07;3!UBERON:0006914;4.18e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.27e-10,2;UBERON:0002173,2.27e-10,2;UBERON:0002186,2.27e-10,2;UBERON:0000487,5.39e-08,22;UBERON:0004821,2.47e-07,3;UBERON:0003215,2.47e-07,3;UBERON:0010368,2.47e-07,3;UBERON:0009911,2.47e-07,3;UBERON:0002299,2.47e-07,3;UBERON:0006524,2.47e-07,3;UBERON:0008874,2.47e-07,3;UBERON:0002169,2.47e-07,3;UBERON:0004894,2.47e-07,3;UBERON:0006914,4.23e-07,25 | |||
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| ||
|short_description=p4@SF3B3 | |short_description=p4@SF3B3 | ||
}} | }} |
Latest revision as of 16:12, 17 September 2015
Short description: | p4@SF3B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SF3B3_5end |
Coexpression cluster: | NA |
Association with transcript: | -485bp_to_ENST00000302516, NM_012426, uc002ezf.2_5end |
EntrezGene: | SF3B3 |
HGNC: | 10770 |
UniProt: | Q15393A8K6V3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.57e-10 | 2 |
neuron associated cell | 3.33e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 3.33e-09 | 17 |
pneumocyte | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.27e-10 | 2 |
alveolar duct | 2.27e-10 | 2 |
bronchiole | 2.27e-10 | 2 |
simple squamous epithelium | 5.39e-08 | 22 |
pulmonary alveolus epithelium | 2.47e-07 | 3 |
alveolus | 2.47e-07 | 3 |
pulmonary lobule | 2.47e-07 | 3 |
lobule | 2.47e-07 | 3 |
alveolus of lung | 2.47e-07 | 3 |
alveolar system | 2.47e-07 | 3 |
pulmonary acinus | 2.47e-07 | 3 |
alveolar sac | 2.47e-07 | 3 |
alveolar wall | 2.47e-07 | 3 |
squamous epithelium | 4.23e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.27e-10 | 2 |
nervous system cancer | 6.35e-07 | 11 |