FFCP PHASE1:Hg19::chr10:56628886..56628921,-: Difference between revisions
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|id=chr10:56628886..56628921,-
|short_description=p1@ENST00000414295
|description=CAGE_peak_1_at_ENST00000414295_5end
|association_with_transcript=-4bp_to_ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000414295_5end | |||
|cluster_id=chr10:56628886..56628921,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_ENST00000414295_5end | |||
|id=chr10:56628886..56628921,- | |||
|ontology_enrichment_celltype=CL:0000319!1.46e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0000632;1.14e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,1.09e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0010226;8.64e-30;1!UBERON:0004140;1.54e-29;1!UBERON:0005062;1.76e-08;4!UBERON:0007284;1.76e-08;4 | |||
|ontology_enrichment_disease=DOID:2513!1.10e-10!1;DOID:3030!1.46e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.36e-17!27;UBERON:0004151!5.37e-14!3;UBERON:0003978!6.12e-14!3;UBERON:0009751!6.12e-14!3;UBERON:0000946!6.12e-14!3;UBERON:0002523!6.12e-14!3;UBERON:0005983!6.12e-14!3;UBERON:0002165!6.12e-14!3;UBERON:0002062!6.12e-14!3;UBERON:0007280!6.12e-14!3;UBERON:0002084!2.53e-11!1;UBERON:0002082!2.53e-11!1;UBERON:0004706!2.53e-11!1;UBERON:0002146!2.79e-11!1;UBERON:0005623!2.79e-11!1;UBERON:0007029!5.05e-11!1;UBERON:0002426!5.57e-11!1;UBERON:0003831!5.57e-11!1;UBERON:0003898!5.57e-11!1;UBERON:0004830!5.57e-11!1;UBERON:0001774!5.57e-11!1;UBERON:0003830!5.57e-11!1;UBERON:0005175!5.57e-11!1;UBERON:0003897!5.57e-11!1;UBERON:0001103!5.57e-11!1;UBERON:0010084!5.57e-11!1;UBERON:0002079!6.14e-11!1;UBERON:0002135!6.77e-11!1;UBERON:0000014!1.86e-10!4;UBERON:0003103!4.71e-10!69;UBERON:0000948!4.75e-10!24;UBERON:0005498!4.75e-10!24;UBERON:0004140!4.75e-10!24;UBERON:0009881!4.75e-10!24;UBERON:0004141!4.75e-10!24;UBERON:0003084!4.75e-10!24;UBERON:0007005!4.75e-10!24;UBERON:0004139!4.75e-10!24;UBERON:0004291!4.75e-10!24;UBERON:0002342!8.69e-07!14;UBERON:0005062!8.69e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;8.64e-30;1!UBERON:0002146;8.64e-30;1!UBERON:0002082;8.64e-30;1!UBERON:0005623;8.64e-30;1!UBERON:0007100;1.04e-18;25!UBERON:0000948;2.13e-12;22!UBERON:0003978;7.07e-11;3!UBERON:0004151;7.07e-11;3!UBERON:0000946;7.07e-11;3!UBERON:0002369;1.14e-10;3!UBERON:0001235;1.14e-10;3!UBERON:0006858;1.14e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,7.48e-30,1;UBERON:0002082,7.48e-30,1;UBERON:0010226,7.48e-30,1;UBERON:0002146,9.99e-30,1;UBERON:0005623,9.99e-30,1;UBERON:0007100,2.28e-17,27;UBERON:0000948,2.04e-11,24;UBERON:0005498,2.04e-11,24;UBERON:0004140,2.04e-11,24;UBERON:0009881,2.04e-11,24;UBERON:0004141,2.04e-11,24;UBERON:0003084,2.04e-11,24;UBERON:0007005,2.04e-11,24;UBERON:0004139,2.04e-11,24;UBERON:0004291,2.04e-11,24;UBERON:0004151,6.73e-11,3;UBERON:0003978,7.42e-11,3;UBERON:0009751,7.42e-11,3;UBERON:0000946,7.42e-11,3;UBERON:0002523,7.42e-11,3;UBERON:0005983,7.42e-11,3;UBERON:0002165,7.42e-11,3;UBERON:0002062,7.42e-11,3;UBERON:0007280,7.42e-11,3;UBERON:0002369,1.20e-10,3;UBERON:0001235,1.20e-10,3;UBERON:0006858,1.20e-10,3;UBERON:0003103,3.50e-07,68 | |||
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|short_description=p1@ENST00000414295 | |||
}} | }} |
Latest revision as of 14:14, 23 July 2015
Short description: | p1@ENST00000414295 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000414295_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -4bp_to_ENST00000414295_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 1.09e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 7.48e-30 | 1 |
cardiac ventricle | 7.48e-30 | 1 |
future cardiac ventricle | 7.48e-30 | 1 |
pulmonary valve | 9.99e-30 | 1 |
semi-lunar valve | 9.99e-30 | 1 |
primary circulatory organ | 2.28e-17 | 27 |
heart | 2.04e-11 | 24 |
primitive heart tube | 2.04e-11 | 24 |
primary heart field | 2.04e-11 | 24 |
anterior lateral plate mesoderm | 2.04e-11 | 24 |
heart tube | 2.04e-11 | 24 |
heart primordium | 2.04e-11 | 24 |
cardiac mesoderm | 2.04e-11 | 24 |
cardiogenic plate | 2.04e-11 | 24 |
heart rudiment | 2.04e-11 | 24 |
cardiac chamber | 6.73e-11 | 3 |
valve | 7.42e-11 | 3 |
cardiac mesenchyme | 7.42e-11 | 3 |
cardial valve | 7.42e-11 | 3 |
tunica intima | 7.42e-11 | 3 |
heart layer | 7.42e-11 | 3 |
endocardium | 7.42e-11 | 3 |
endocardial cushion | 7.42e-11 | 3 |
presumptive endocardium | 7.42e-11 | 3 |
adrenal gland | 1.20e-10 | 3 |
adrenal cortex | 1.20e-10 | 3 |
adrenal/interrenal gland | 1.20e-10 | 3 |
compound organ | 3.50e-07 | 68 |