FFCP PHASE1:Mm9::chr9:50885215..50885226,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=244864 | |EntrezGene=244864 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2499 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C351,A4QPF5 | |UniProt=Q8C351,A4QPF5 | ||
|association_with_transcript=-16bp_to_ENSMUST00000098782,NM_001033534,uc012gtc.1_5end | |association_with_transcript=-16bp_to_ENSMUST00000098782,NM_001033534,uc012gtc.1_5end | ||
|cluster_id=chr9:50885215..50885226,- | |||
|description=CAGE_peak_3_at_Layn_5end | |description=CAGE_peak_3_at_Layn_5end | ||
|id=chr9:50885215..50885226,- | |id=chr9:50885215..50885226,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.89e-13,7;CL:0000680,1.07e-11,6;CL:0000187,1.07e-11,6;CL:0000056,1.07e-11,6;CL:0000333,2.36e-08,10;CL:0000095,2.36e-08,10;CL:0000243,2.36e-08,10;CL:0000123,2.36e-08,10;CL:0000125,2.36e-08,10;CL:0000030,2.36e-08,10;CL:0000339,2.36e-08,10;CL:0000128,1.21e-07,6;CL:0000126,1.21e-07,6;CL:0000127,1.21e-07,6;CL:0000355,1.97e-07,9;CL:0002494,7.69e-07,3;CL:0000737,7.69e-07,3;CL:0000746,7.69e-07,3;CL:0000513,7.69e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!7.35e-07!23;UBERON:0001009!7.35e-07!23 | |ontology_enrichment_uberon=UBERON:0004535!7.35e-07!23;UBERON:0001009!7.35e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000383,2.36e-08,10;UBERON:0001134,1.97e-07,9;UBERON:0002036,1.97e-07,9;UBERON:0002385,1.97e-07,9;UBERON:0000486,1.97e-07,9;UBERON:0007503,1.97e-07,9;UBERON:0001015,1.97e-07,9;UBERON:0002329,1.97e-07,9;UBERON:0003082,1.97e-07,9;UBERON:0003059,1.97e-07,9;UBERON:0007282,1.97e-07,9;UBERON:0004290,1.97e-07,9;UBERON:0009618,1.97e-07,9 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,3.02152363141385,3.24406179902447,2.56965453026354,0.782391344348039,1.52617609466313,5.27246838562732,3.11087838518853,1.81982348112971,2.87505128729943,0,0,0,11.8339340576536,5.15760191889762,3.6097046459421,0,0.528990979272033,0,0.338844532069132,1.77858959222228,1.7997994345628,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,1.71390590642282,0.662605622854841,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0,0,0.0914876436024097,0,0.837548997004143,0,0.15279824777681,0.589257170947335,0.854230084794618,0.372798891650601,2.49896437999507,4.30757892608677,2.6087803983151,0,0,0,0,0.448026887097336,0,2.72688516124892,2.07828803682295,1.7666978725517,0,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0.776813650941515,0.593768556259299,0.346970653532272,0.304465478312141,0,0.60289056221049,0.470354828542819,0.879666139307728,0.247194967734374,0.289198713839823,0,0.808834249737046,1.54589062922275,0,0,0.878342391034642,0.209446706813455,0,0.479260498023681,1.19980546198682,0.635351135365324,0.149790639404823,0.457500602818626,0,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0.712875546952214,0.870848794270651,0.252722758433675,0,0,0.229902104433473,0.720248519221397,0.452114453507145,0.544291993210623,0.512454881139399,0.655912071918102,1.03481348295606,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.834141747676794,0.696504333044333,0.205782136407943,0.398068533636986,0,0.257347907114715,0.568326998791185,1.24275463521301,0.234526059981096,0.180062061461015,0.710234206755631,0.590292695242212,0.617068451549513,0.930135779001631,0.268273401399619,0.700592054203017,0.822799249567402,0.492502392237286,0.972825714550269,0.730999937126662,1.53685080703735,0.939444931322602,0.841159794256509,0.308713837137853,0,0.264450566663544,0.426576501070468,0,0.515469845288373,0,0.444756087689741,0,0.474529061544512,0,1.00534083520108,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0.456994050438915,0,0.203651327845314,0.581857461502877,1.1221731182451,0.758838445491087,0.295220295959204,0.627994911365499,0.987177311374404,1.1858105083486,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0.324270453550071,0.823684239564244,0,0.744281895337007,0.936113019343682,0.252578877947112,0.179397413521912,0.482443521363367,1.10851914099963,0.37898282354097,0.651859905768103,0.848725428875941,0,0.335012514883631,0.476087281772027,0.585400943573396,0.630540576424764,2.21464689648775,1.11618338060241,0.983179888294428,1.72684981865896,0.867894351489069,0,3.80733978673097,0,1.37968373152366,1.76605648986571,0.820481806145422,4.09837363441689,1.00988370881749,0.631016438832513,1.17131623288992,0.215423397732799,1.43381278771531,1.33679204449436,0.849229592366497,0.809621403349789,0.876767573733936,0,0,2.55492153374884,0.712262414669021,0.325773918707152,0.824850614862677,0,0.242780636154981,0,0.754420319023592,0.295301892880773,0.307435147943927,1.29214146584111,0,0.356497378384721,0.632073515871632,0,0,0.680879211507576,0.36012218806262,0,0.428674070063185,1.06404140185364,0.356737635204141,0.493647061806363,1.2178597964584,0.23467170806371,0,0.220528398054962,0.98931751764888,0.161464426695906,0.241251699712623,0.119372344003136,0,0,2.96680483216816,0,0.206386867963223,0.740778109478847,0.376736914009382,0,0.686334519619568,0.679913719975421,0.979660166265606,1.38199973804424,0,0.316335993581135,0.813277868507395,0.216010681643603,0.627264888043406,0,0.269728692769641,0.909188012978695,0.523511883968059,0,0,0,1.04661582230785,0.496375471371293,0.777804753376191,0.387479470433193,1.18269287843545,0.938857909166032,1.0416350787516,0.314578033277133,0,0.576060012515731,0,2.02725215290164,0.821687657318618,0.389762468933385,0.358053391334963,0,0,0.147689527174577,0.100966449948148,0.15241361331,0.302478555410522,0.194915761479505,0,0,0.453460767230423,0,0,0,0.965947970160952,1.31377732815827,0.549454872801795,0.214368379079066,0,0,0.920650473014354,1.14579102687879,0.515559547031063,0,0,2.02506750069542,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0,0.943131706930381,0.187283014939765,0.640251524048693,0.34461281373368,0.476293691283074,0.115884325944855,0,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.436039249896986,0.282328141245992,0.846146078916765,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.591026894253381,0.409231043169689,1.23949472948773,1.15743966588685,0,0.701794825336225,0.859484216193193,0.956441660344217,0.661774257358546,0.463735671240843 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.510259740906419,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0.418531630736908,0,0,0,0,0,3.02152363141385,3.24406179902447,2.56965453026354,0.782391344348039,1.52617609466313,5.27246838562732,3.11087838518853,1.81982348112971,2.87505128729943,0,0,0,11.8339340576536,5.15760191889762,3.6097046459421,0,0.528990979272033,0,0.338844532069132,1.77858959222228,1.7997994345628,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,1.71390590642282,0.662605622854841,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0,0,0.0914876436024097,0,0.837548997004143,0,0.15279824777681,0.589257170947335,0.854230084794618,0.372798891650601,2.49896437999507,4.30757892608677,2.6087803983151,0,0,0,0,0.448026887097336,0,2.72688516124892,2.07828803682295,1.7666978725517,0,1.28326477414318,2.54805239706646,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0.776813650941515,0.593768556259299,0.346970653532272,0.304465478312141,0,0.60289056221049,0.470354828542819,0.879666139307728,0.247194967734374,0.289198713839823,0,0.808834249737046,1.54589062922275,0,0,0.878342391034642,0.209446706813455,0,0.479260498023681,1.19980546198682,0.635351135365324,0.149790639404823,0.457500602818626,0,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0.712875546952214,0.870848794270651,0.252722758433675,0,0,0.229902104433473,0.720248519221397,0.452114453507145,0.544291993210623,0.512454881139399,0.655912071918102,1.03481348295606,0.215567992932842,0.189106080167819,0.175951124163949,0.657587197282725,0.834141747676794,0.696504333044333,0.205782136407943,0.398068533636986,0,0.257347907114715,0.568326998791185,1.24275463521301,0.234526059981096,0.180062061461015,0.710234206755631,0.590292695242212,0.617068451549513,0.930135779001631,0.268273401399619,0.700592054203017,0.822799249567402,0.492502392237286,0.972825714550269,0.730999937126662,1.53685080703735,0.939444931322602,0.841159794256509,0.308713837137853,0,0.264450566663544,0.426576501070468,0,0.515469845288373,0,0.444756087689741,0,0.474529061544512,0,1.00534083520108,0.397912944082302,0.19496408711912,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0.456994050438915,0,0.203651327845314,0.581857461502877,1.1221731182451,0.758838445491087,0.295220295959204,0.627994911365499,0.987177311374404,1.1858105083486,0.166845105716094,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0.324270453550071,0.823684239564244,0,0.744281895337007,0.936113019343682,0.252578877947112,0.179397413521912,0.482443521363367,1.10851914099963,0.37898282354097,0.651859905768103,0.848725428875941,0,0.335012514883631,0.476087281772027,0.585400943573396,0.630540576424764,2.21464689648775,1.11618338060241,0.983179888294428,1.72684981865896,0.867894351489069,0,3.80733978673097,0,1.37968373152366,1.76605648986571,0.820481806145422,4.09837363441689,1.00988370881749,0.631016438832513,1.17131623288992,0.215423397732799,1.43381278771531,1.33679204449436,0.849229592366497,0.809621403349789,0.876767573733936,0,0,2.55492153374884,0.712262414669021,0.325773918707152,0.824850614862677,0,0.242780636154981,0,0.754420319023592,0.295301892880773,0.307435147943927,1.29214146584111,0,0.356497378384721,0.632073515871632,0,0,0.680879211507576,0.36012218806262,0,0.428674070063185,1.06404140185364,0.356737635204141,0.493647061806363,1.2178597964584,0.23467170806371,0,0.220528398054962,0.98931751764888,0.161464426695906,0.241251699712623,0.119372344003136,0,0,2.96680483216816,0,0.206386867963223,0.740778109478847,0.376736914009382,0,0.686334519619568,0.679913719975421,0.979660166265606,1.38199973804424,0,0.316335993581135,0.813277868507395,0.216010681643603,0.627264888043406,0,0.269728692769641,0.909188012978695,0.523511883968059,0,0,0,1.04661582230785,0.496375471371293,0.777804753376191,0.387479470433193,1.18269287843545,0.938857909166032,1.0416350787516,0.314578033277133,0,0.576060012515731,0,2.02725215290164,0.821687657318618,0.389762468933385,0.358053391334963,0,0,0.147689527174577,0.100966449948148,0.15241361331,0.302478555410522,0.194915761479505,0,0,0.453460767230423,0,0,0,0.965947970160952,1.31377732815827,0.549454872801795,0.214368379079066,0,0,0.920650473014354,1.14579102687879,0.515559547031063,0,0,2.02506750069542,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0,0.222246727801615,0.206035057238894,0,0.505394423527595,0,0.943131706930381,0.187283014939765,0.640251524048693,0.34461281373368,0.476293691283074,0.115884325944855,0,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.436039249896986,0.282328141245992,0.846146078916765,0.182927972872773,0,0.407412341537585,0,0.237270036248348,0.591026894253381,0.409231043169689,1.23949472948773,1.15743966588685,0,0.701794825336225,0.859484216193193,0.956441660344217,0.661774257358546,0.463735671240843 | ||
|short_description=p3@Layn | |short_description=p3@Layn | ||
}} | }} |
Latest revision as of 19:43, 26 September 2015
Short description: | p3@Layn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Layn_5end |
Coexpression cluster: | MCL_coexpression_mm9:2499 |
Association with transcript: | -16bp_to_ENSMUST00000098782, NM_001033534, uc012gtc.1_5end |
EntrezGene: | Layn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.89e-13 | 7 |
muscle precursor cell | 1.07e-11 | 6 |
muscle cell | 1.07e-11 | 6 |
myoblast | 1.07e-11 | 6 |
migratory neural crest cell | 2.36e-08 | 10 |
neuron associated cell | 2.36e-08 | 10 |
glial cell (sensu Vertebrata) | 2.36e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 2.36e-08 | 10 |
glial cell | 2.36e-08 | 10 |
glioblast | 2.36e-08 | 10 |
glioblast (sensu Vertebrata) | 2.36e-08 | 10 |
oligodendrocyte | 1.21e-07 | 6 |
macroglial cell | 1.21e-07 | 6 |
astrocyte | 1.21e-07 | 6 |
multi-potent skeletal muscle stem cell | 1.97e-07 | 9 |
cardiocyte | 7.69e-07 | 3 |
striated muscle cell | 7.69e-07 | 3 |
cardiac muscle cell | 7.69e-07 | 3 |
cardiac muscle myoblast | 7.69e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculature of body | 2.36e-08 | 10 |
skeletal muscle tissue | 1.97e-07 | 9 |
striated muscle tissue | 1.97e-07 | 9 |
muscle tissue | 1.97e-07 | 9 |
multilaminar epithelium | 1.97e-07 | 9 |
epithelial vesicle | 1.97e-07 | 9 |
musculature | 1.97e-07 | 9 |
somite | 1.97e-07 | 9 |
myotome | 1.97e-07 | 9 |
presomitic mesoderm | 1.97e-07 | 9 |
presumptive segmental plate | 1.97e-07 | 9 |
dermomyotome | 1.97e-07 | 9 |
trunk paraxial mesoderm | 1.97e-07 | 9 |