FFCP PHASE1:Hg19::chr17:39264496..39264528,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39264496..39264528,+ | |||
|coexpression_cluster_id=C785 | |||
|description=CAGE_peak_at_chr17:39264496..39264528,+ | |description=CAGE_peak_at_chr17:39264496..39264528,+ | ||
|id=chr17:39264496..39264528,+ | |id=chr17:39264496..39264528,+ | ||
|ontology_enrichment_celltype=CL:0000236!2.72e-14!14;CL:0002620!2.48e-13!23;CL:0000057!6.78e-11!75;CL:0000945!1.53e-08!24;CL:0000826!1.53e-08!24;CL:0002556!3.12e-07!6 | |ontology_enrichment_celltype=CL:0000236!2.72e-14!14;CL:0002620!2.48e-13!23;CL:0000057!6.78e-11!75;CL:0000945!1.53e-08!24;CL:0000826!1.53e-08!24;CL:0002556!3.12e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.24e-32;13!CL:0000945;1.59e-16;24!CL:0002556;1.43e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.35e-29,14;CL:0000945,1.76e-16,24;CL:0000826,1.76e-16,24;CL:0002556,1.57e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;5.86e-09;5 | |||
|ontology_enrichment_disease=DOID:17!7.13e-09!5;DOID:450!7.13e-09!5;DOID:66!7.13e-09!5;DOID:423!7.13e-09!5;DOID:0080000!7.13e-09!5;DOID:11722!7.13e-09!5;DOID:0060084!4.82e-07!3;DOID:127!4.82e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.28e-15;3!DOID:127;2.28e-15;3!DOID:0060072;1.22e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.13e-15,3;DOID:127,2.13e-15,3;DOID:0060072,1.16e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0001758!3.12e-07!6;UBERON:0003672!3.12e-07!6;UBERON:0002097!3.87e-07!40;UBERON:0003102!6.34e-07!95;UBERON:0002199!8.99e-07!45;UBERON:0002416!8.99e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;5.86e-09;5!UBERON:0001758;1.43e-07;6!UBERON:0003672;1.43e-07;6!UBERON:0011137;6.59e-07;11!UBERON:0010323;6.59e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,6.19e-09,5;UBERON:0004117,6.19e-09,5;UBERON:0007689,6.19e-09,5;UBERON:0007123,6.19e-09,5;UBERON:0003091,6.19e-09,5;UBERON:0001758,1.57e-07,6;UBERON:0003672,1.57e-07,6;UBERON:0010323,7.03e-07,11 | |||
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| ||
|short_description=p@chr17:39264496..39264528,+ | |short_description=p@chr17:39264496..39264528,+ | ||
}} | }} |
Latest revision as of 16:38, 25 July 2015
Short description: | p@chr17:39264496..39264528, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39264496..39264528, + |
Coexpression cluster: | C785_basal_mesenchymal_chorionic_leiomyoma_mesodermal_Fibroblast_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.35e-29 | 14 |
lymphocyte of B lineage | 1.76e-16 | 24 |
pro-B cell | 1.76e-16 | 24 |
fibroblast of periodontium | 1.57e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 6.19e-09 | 5 |
pharyngeal pouch | 6.19e-09 | 5 |
thyroid diverticulum | 6.19e-09 | 5 |
pharyngeal pouch 2 | 6.19e-09 | 5 |
thyroid primordium | 6.19e-09 | 5 |
periodontium | 1.57e-07 | 6 |
dentition | 1.57e-07 | 6 |
cranial skeletal system | 7.03e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.13e-15 | 3 |
leiomyoma | 2.13e-15 | 3 |
benign neoplasm | 1.16e-11 | 4 |