FFCP PHASE1:Hg19::chr12:125054334..125054354,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:125054334..125054354,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr12:125054334..125054354,- | |description=CAGE_peak_at_chr12:125054334..125054354,- | ||
|id=chr12:125054334..125054354,- | |id=chr12:125054334..125054354,- | ||
|ontology_enrichment_celltype=CL:0002322!2.11e-10!5;CL:0000128!2.74e-10!7;CL:0000126!2.74e-10!7;CL:0000127!2.74e-10!7;CL:0002453!2.74e-10!7;CL:0002319!2.68e-08!25;CL:0000133!1.08e-07!59;CL:0002603!2.45e-07!3;CL:0000095!5.81e-07!17;CL:0000123!5.81e-07!17 | |ontology_enrichment_celltype=CL:0002322!2.11e-10!5;CL:0000128!2.74e-10!7;CL:0000126!2.74e-10!7;CL:0000127!2.74e-10!7;CL:0002453!2.74e-10!7;CL:0002319!2.68e-08!25;CL:0000133!1.08e-07!59;CL:0002603!2.45e-07!3;CL:0000095!5.81e-07!17;CL:0000123!5.81e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0000540;5.91e-17;6!CL:0000404;5.91e-17;6!CL:0002603;1.05e-15;3!CL:0002319;2.57e-14;25!CL:0000128;3.05e-07;7!CL:0000126;3.05e-07;7!CL:0000127;3.05e-07;7!CL:0002575;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.45e-17,6;CL:0000031,5.45e-17,6;CL:0000404,5.45e-17,6;CL:0002603,8.44e-16,3;CL:0002319,2.31e-14,25;CL:0000047,6.73e-13,8;CL:0000133,3.39e-08,59;CL:0000128,2.77e-07,7;CL:0000126,2.77e-07,7;CL:0000127,2.77e-07,7;CL:0002453,2.77e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;5.91e-17;6!UBERON:0005754;1.48e-12;1!UBERON:0007297;6.61e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.45e-19!82;UBERON:0005743!7.82e-19!86;UBERON:0000073!1.42e-18!94;UBERON:0001016!1.42e-18!94;UBERON:0007023!1.69e-16!115;UBERON:0003075!2.80e-16!86;UBERON:0007284!2.80e-16!86;UBERON:0002346!3.43e-16!90;UBERON:0000955!6.02e-15!69;UBERON:0006238!6.02e-15!69;UBERON:0002616!7.85e-15!59;UBERON:0001049!2.23e-14!57;UBERON:0005068!2.23e-14!57;UBERON:0006241!2.23e-14!57;UBERON:0007135!2.23e-14!57;UBERON:0003076!1.50e-13!15;UBERON:0003057!1.50e-13!15;UBERON:0000924!1.61e-12!173;UBERON:0006601!1.61e-12!173;UBERON:0004121!2.18e-12!169;UBERON:0004733!1.66e-11!12;UBERON:0002028!1.66e-11!12;UBERON:0007277!1.66e-11!12;UBERON:0004732!1.81e-10!13;UBERON:0000033!1.20e-09!123;UBERON:0000153!8.57e-09!129;UBERON:0007811!8.57e-09!129;UBERON:0003135!1.86e-08!11;UBERON:0002298!1.32e-07!8;UBERON:0003056!2.29e-07!61;UBERON:0002680!2.42e-07!9;UBERON:0001895!2.42e-07!9;UBERON:0010092!2.42e-07!9;UBERON:0006947!2.77e-07!3;UBERON:0004054!2.77e-07!3;UBERON:0002200!3.62e-07!11;UBERON:0006876!3.62e-07!11;UBERON:0002020!7.77e-07!34;UBERON:0003528!7.77e-07!34 | |ontology_enrichment_uberon=UBERON:0001017!7.45e-19!82;UBERON:0005743!7.82e-19!86;UBERON:0000073!1.42e-18!94;UBERON:0001016!1.42e-18!94;UBERON:0007023!1.69e-16!115;UBERON:0003075!2.80e-16!86;UBERON:0007284!2.80e-16!86;UBERON:0002346!3.43e-16!90;UBERON:0000955!6.02e-15!69;UBERON:0006238!6.02e-15!69;UBERON:0002616!7.85e-15!59;UBERON:0001049!2.23e-14!57;UBERON:0005068!2.23e-14!57;UBERON:0006241!2.23e-14!57;UBERON:0007135!2.23e-14!57;UBERON:0003076!1.50e-13!15;UBERON:0003057!1.50e-13!15;UBERON:0000924!1.61e-12!173;UBERON:0006601!1.61e-12!173;UBERON:0004121!2.18e-12!169;UBERON:0004733!1.66e-11!12;UBERON:0002028!1.66e-11!12;UBERON:0007277!1.66e-11!12;UBERON:0004732!1.81e-10!13;UBERON:0000033!1.20e-09!123;UBERON:0000153!8.57e-09!129;UBERON:0007811!8.57e-09!129;UBERON:0003135!1.86e-08!11;UBERON:0002298!1.32e-07!8;UBERON:0003056!2.29e-07!61;UBERON:0002680!2.42e-07!9;UBERON:0001895!2.42e-07!9;UBERON:0010092!2.42e-07!9;UBERON:0006947!2.77e-07!3;UBERON:0004054!2.77e-07!3;UBERON:0002200!3.62e-07!11;UBERON:0006876!3.62e-07!11;UBERON:0002020!7.77e-07!34;UBERON:0003528!7.77e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;8.40e-17;11!UBERON:0006947;5.18e-16;3!UBERON:0004054;5.18e-16;3!UBERON:0000473;2.07e-13;8!UBERON:0001000;9.92e-13;1!UBERON:0005352;9.92e-13;1!UBERON:0000998;1.48e-12;1!UBERON:0006868;1.48e-12;1!UBERON:0002134;2.91e-12;1!UBERON:0005208;2.91e-12;1!UBERON:0004145;2.91e-12;1!UBERON:0005946;2.91e-12;1!UBERON:0005965;2.91e-12;1!UBERON:0002078;2.91e-12;1!UBERON:0005904;3.00e-12;4!UBERON:0003101;1.65e-08;22!UBERON:0000079;1.65e-08;22!UBERON:0002037;2.61e-08;6!UBERON:0002081;9.27e-07;2!UBERON:0002133;9.27e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,8.58e-17,11;UBERON:0006947,5.38e-16,3;UBERON:0004054,5.38e-16,3;UBERON:0000473,2.11e-13,8;UBERON:0001000,9.92e-13,1;UBERON:0005352,9.92e-13,1;UBERON:0000998,1.57e-12,1;UBERON:0006868,1.57e-12,1;UBERON:0002134,1.96e-12,1;UBERON:0005208,1.96e-12,1;UBERON:0005946,1.96e-12,1;UBERON:0005965,1.96e-12,1;UBERON:0002078,1.96e-12,1;UBERON:0005904,3.09e-12,4;UBERON:0003101,1.67e-08,22;UBERON:0000079,1.67e-08,22;UBERON:0002037,2.34e-08,6;UBERON:0006215,2.34e-08,6;UBERON:0002081,7.61e-07,2;UBERON:0002133,7.61e-07,2;UBERON:0010227,7.61e-07,2 | |||
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|short_description=p@chr12:125054334..125054354,- | |short_description=p@chr12:125054334..125054354,- | ||
}} | }} |
Latest revision as of 06:26, 24 July 2015
Short description: | p@chr12:125054334..125054354, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:125054334..125054354, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.45e-17 | 6 |
neuroblast | 5.45e-17 | 6 |
electrically signaling cell | 5.45e-17 | 6 |
astrocyte of the cerebellum | 8.44e-16 | 3 |
neural cell | 2.31e-14 | 25 |
neuronal stem cell | 6.73e-13 | 8 |
neurectodermal cell | 3.39e-08 | 59 |
oligodendrocyte | 2.77e-07 | 7 |
macroglial cell | 2.77e-07 | 7 |
astrocyte | 2.77e-07 | 7 |
oligodendrocyte precursor cell | 2.77e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 8.58e-17 | 11 |
male genital duct | 5.38e-16 | 3 |
internal male genitalia | 5.38e-16 | 3 |
testis | 2.11e-13 | 8 |
vas deferens | 9.92e-13 | 1 |
spermatic cord | 9.92e-13 | 1 |
seminal vesicle | 1.57e-12 | 1 |
seminal fluid secreting gland | 1.57e-12 | 1 |
tricuspid valve | 1.96e-12 | 1 |
right atrium valve | 1.96e-12 | 1 |
outflow tract of atrium | 1.96e-12 | 1 |
outflow part of right atrium | 1.96e-12 | 1 |
right cardiac atrium | 1.96e-12 | 1 |
duct of male reproductive system | 3.09e-12 | 4 |
male organism | 1.67e-08 | 22 |
male reproductive system | 1.67e-08 | 22 |
cerebellum | 2.34e-08 | 6 |
rhombic lip | 2.34e-08 | 6 |
cardiac atrium | 7.61e-07 | 2 |
atrioventricular valve | 7.61e-07 | 2 |
future cardiac atrium | 7.61e-07 | 2 |