FFCP PHASE1:Hg19::chr12:133186989..133187012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_ENST00000544018_5end | |association_with_transcript=-6bp_to_ENST00000544018_5end | ||
|cluster_id=chr12:133186989..133187012,- | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_1_at_ENST00000544018_5end | |description=CAGE_peak_1_at_ENST00000544018_5end | ||
|id=chr12:133186989..133187012,- | |id=chr12:133186989..133187012,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002262;5.69e-21;2!CL:1000398;5.69e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,6.96e-21,2;CL:1000398,6.96e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.11e-21;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!2.23e-17!3;UBERON:0004054!2.23e-17!3;UBERON:0005904!3.70e-13!4;UBERON:0003135!2.09e-12!11;UBERON:0003101!1.97e-08!22;UBERON:0000079!1.97e-08!22;UBERON:0001301!5.58e-07!1;UBERON:0001000!6.59e-07!1;UBERON:0005352!6.59e-07!1;UBERON:0000998!7.35e-07!1;UBERON:0006868!7.35e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.19e-53;3!UBERON:0004054;2.19e-53;3!UBERON:0001301;6.62e-41;1!UBERON:0001000;2.21e-40;1!UBERON:0005352;2.21e-40;1!UBERON:0005904;2.22e-40;4!UBERON:0001281;5.69e-21;2!UBERON:0003497;5.69e-21;2!UBERON:0003909;5.69e-21;2!UBERON:0003835;5.69e-21;2!UBERON:0000058;6.93e-17;10!UBERON:0003135;1.88e-15;11!UBERON:0001280;1.83e-14;3!UBERON:0004647;1.83e-14;3!UBERON:0004175;1.37e-08;21!UBERON:0003101;3.04e-08;22!UBERON:0000079;3.04e-08;22!UBERON:0003513;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,2.19e-53,3;UBERON:0004054,2.19e-53,3;UBERON:0001301,6.62e-41,1;UBERON:0001000,2.21e-40,1;UBERON:0005352,2.21e-40,1;UBERON:0005904,2.22e-40,4;UBERON:0001281,6.96e-21,2;UBERON:0003497,6.96e-21,2;UBERON:0003909,6.96e-21,2;UBERON:0003835,6.96e-21,2;UBERON:0000058,1.68e-19,19;UBERON:0003135,1.88e-15,11;UBERON:0001280,2.09e-14,3;UBERON:0004647,2.09e-14,3;UBERON:0005171,2.09e-14,3;UBERON:0003101,3.04e-08,22;UBERON:0000079,3.04e-08,22;UBERON:0002394,7.25e-08,6;UBERON:0003928,7.25e-08,6;UBERON:0004175,2.28e-07,25;UBERON:0003513,6.39e-07,7 | |||
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|short_description=p1@ENST00000544018 | |short_description=p1@ENST00000544018 | ||
}} | }} |
Latest revision as of 06:54, 24 July 2015
Short description: | p1@ENST00000544018 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000544018_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -6bp_to_ENST00000544018_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 6.96e-21 | 2 |
endothelial cell of hepatic sinusoid | 6.96e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 2.19e-53 | 3 |
internal male genitalia | 2.19e-53 | 3 |
epididymis | 6.62e-41 | 1 |
vas deferens | 2.21e-40 | 1 |
spermatic cord | 2.21e-40 | 1 |
duct of male reproductive system | 2.22e-40 | 4 |
hepatic sinusoid | 6.96e-21 | 2 |
abdomen blood vessel | 6.96e-21 | 2 |
sinusoid | 6.96e-21 | 2 |
abdominal segment blood vessel | 6.96e-21 | 2 |
duct | 1.68e-19 | 19 |
male reproductive organ | 1.88e-15 | 11 |
liver parenchyma | 2.09e-14 | 3 |
liver lobule | 2.09e-14 | 3 |
hepatic duct | 2.09e-14 | 3 |
male organism | 3.04e-08 | 22 |
male reproductive system | 3.04e-08 | 22 |
bile duct | 7.25e-08 | 6 |
digestive system duct | 7.25e-08 | 6 |
internal genitalia | 2.28e-07 | 25 |
trunk blood vessel | 6.39e-07 | 7 |