FFCP PHASE1:Hg19::chr10:92178805..92178827,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:92178805..92178827,+
|short_description=p@chr10:92178805..92178827,+
|description=CAGE_peak_at_chr10:92178805..92178827,+
|association_with_transcript=NA
...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:92178805..92178827,+ | |||
|description=CAGE_peak_at_chr10:92178805..92178827,+ | |||
|id=chr10:92178805..92178827,+ | |||
|ontology_enrichment_celltype=CL:0002504!8.73e-10!3;CL:1000279!8.73e-10!3;CL:1000280!8.73e-10!3;CL:0002564!1.10e-09!3;CL:0000064!5.04e-09!3;CL:0005012!5.04e-09!3;CL:0000067!5.04e-09!3;CL:0002304!5.04e-09!3;CL:0000183!6.10e-09!59;CL:0000680!5.05e-08!57;CL:0000056!5.05e-08!57;CL:0000355!5.05e-08!57;CL:0000055!9.48e-08!180;CL:0000192!1.06e-07!42;CL:0000514!1.06e-07!42;CL:0002195!1.27e-07!2;CL:0002571!1.27e-07!2;CL:0000187!1.98e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002195;1.51e-57;2!CL:0002571;1.51e-57;2!CL:0000167;9.98e-30;1!CL:0000164;9.98e-30;1!CL:0000502;9.98e-30;1!CL:0000172;9.98e-30;1!CL:0000173;9.98e-30;1!CL:0002599;2.73e-29;1!CL:0002600;2.21e-15;2!CL:0000064;1.04e-10;3!CL:0000067;1.04e-10;3!CL:0005012;1.04e-10;3!CL:0002304;1.04e-10;3!CL:0002537;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,2.02e-57,2;CL:0002571,2.02e-57,2;CL:0000167,7.48e-30,1;CL:0000164,7.48e-30,1;CL:0000502,7.48e-30,1;CL:0000172,7.48e-30,1;CL:0000173,7.48e-30,1;CL:0002351,7.48e-30,1;CL:0002599,1.78e-29,1;CL:0002600,2.37e-15,2;CL:0000064,9.90e-11,3;CL:0000067,9.90e-11,3;CL:0005012,9.90e-11,3;CL:0002304,9.90e-11,3;CL:0002537,6.77e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002351;9.98e-30;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;9.98e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,7.48e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0002203!4.66e-12!6;UBERON:0001768!4.66e-12!6;UBERON:0000488!8.96e-12!4;UBERON:0005256!1.89e-10!143;UBERON:0002242!1.10e-09!3;UBERON:0003068!1.10e-09!3;UBERON:0002328!1.10e-09!3;UBERON:0004880!1.10e-09!3;UBERON:0001778!5.04e-09!3;UBERON:0001775!5.04e-09!3;UBERON:0000481!1.76e-08!347;UBERON:0002385!5.22e-08!63;UBERON:0001015!5.22e-08!63;UBERON:0000383!5.22e-08!63;UBERON:0000914!6.45e-08!83;UBERON:0002329!6.45e-08!83;UBERON:0003077!6.45e-08!83;UBERON:0003059!6.45e-08!83;UBERON:0007282!6.45e-08!83;UBERON:0009618!6.45e-08!83;UBERON:0007285!6.45e-08!83;UBERON:0004290!8.50e-08!70;UBERON:0001134!2.83e-07!61;UBERON:0002036!2.83e-07!61;UBERON:0003082!2.83e-07!61;UBERON:0000486!4.70e-07!82;UBERON:0001801!5.81e-07!14;UBERON:0002100!9.37e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001043;1.04e-10;3!UBERON:0001778;1.04e-10;3!UBERON:0001775;1.04e-10;3!UBERON:0000488;2.35e-08;4!UBERON:0002107;5.50e-07;19!UBERON:0006925;5.50e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,8.99e-11,3;UBERON:0009143,8.99e-11,3;UBERON:0001778,9.90e-11,3;UBERON:0001775,9.90e-11,3;UBERON:0000488,2.26e-08,4;UBERON:0002107,5.66e-07,19;UBERON:0006925,5.66e-07,19;UBERON:0008836,5.66e-07,19 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0.990130823680373,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,1.33037638477538,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0.257207374262142,0,0.799266537048298,3.0025378668211,0,0,0,3.19852753868291,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.813795071099207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0.812839312631559,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0.359744915166629,0.823611089208164,0.353437207037059,0.404364963146632,0,0,1.46290121726877,0,0,0.409499734223957,0,0,0,0,0,0,1.31178950409327,0.811641507850816,0,0,0.286822704408103,0,0.35667105148125,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407992870545287,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0.940634592723046,0.245148321753905,3.77082475362602,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0,0.990130823680373,0,0,0,0,0,0.246242116153576,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,1.33037638477538,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0.257207374262142,0,0.799266537048298,3.0025378668211,0,0,0,3.19852753868291,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.813795071099207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0.812839312631559,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0.359744915166629,0.823611089208164,0.353437207037059,0.404364963146632,0,0,1.46290121726877,0,0,0.409499734223957,0,0,0,0,0,0,1.31178950409327,0.811641507850816,0,0,0.286822704408103,0,0.35667105148125,0,0,0,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407992870545287,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0,0,0,0.940634592723046,0.245148321753905,3.77082475362602,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:92178805..92178827,+ | |||
}} | }} |
Latest revision as of 16:41, 23 July 2015
Short description: | p@chr10:92178805..92178827, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:92178805..92178827, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 2.02e-57 | 2 |
hepatic mesenchymal stem cell | 2.02e-57 | 2 |
peptide hormone secreting cell | 7.48e-30 | 1 |
enteroendocrine cell | 7.48e-30 | 1 |
type D enteroendocrine cell | 7.48e-30 | 1 |
somatostatin secreting cell | 7.48e-30 | 1 |
pancreatic D cell | 7.48e-30 | 1 |
progenitor cell of endocrine pancreas | 7.48e-30 | 1 |
smooth muscle cell of the esophagus | 1.78e-29 | 1 |
smooth muscle cell of trachea | 2.37e-15 | 2 |
ciliated cell | 9.90e-11 | 3 |
ciliated epithelial cell | 9.90e-11 | 3 |
multi-ciliated epithelial cell | 9.90e-11 | 3 |
non-pigmented ciliary epithelial cell | 9.90e-11 | 3 |
amnion mesenchymal stem cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
esophagus | 8.99e-11 | 3 |
esophageal region | 8.99e-11 | 3 |
ciliary epithelium | 9.90e-11 | 3 |
ciliary body | 9.90e-11 | 3 |
atypical epithelium | 2.26e-08 | 4 |
liver | 5.66e-07 | 19 |
digestive gland | 5.66e-07 | 19 |
liver bud | 5.66e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 7.48e-30 | 1 |