FFCP PHASE1:Hg19::chr12:52913812..52913837,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:52913812..52913837,+ | |||
|coexpression_cluster_id=C207 | |||
|description=CAGE_peak_at_chr12:52913812..52913837,+ | |description=CAGE_peak_at_chr12:52913812..52913837,+ | ||
|id=chr12:52913812..52913837,+ | |id=chr12:52913812..52913837,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.34e-28!43;CL:0000066!9.71e-21!254;CL:0002159!1.17e-20!13;CL:0002368!1.25e-20!13;CL:0000223!4.36e-19!59;CL:0000622!8.49e-14!5;CL:0002251!1.86e-13!21;CL:0002202!6.77e-12!9;CL:0002632!6.77e-12!9;CL:0000244!1.50e-11!4;CL:0000731!1.50e-11!4;CL:0000154!1.96e-11!6;CL:0002328!4.99e-10!3;CL:0000068!5.61e-10!3;CL:0000069!5.61e-10!3;CL:0000307!5.61e-10!3;CL:0000377!5.61e-10!3;CL:0002077!6.46e-10!33;CL:0000349!3.08e-09!3;CL:0002577!3.08e-09!3;CL:0002166!3.63e-09!3;CL:0002623!5.20e-09!3;CL:0000362!5.79e-09!8;CL:0002621!9.69e-09!3;CL:0000076!1.33e-08!62;CL:0000240!2.62e-08!6;CL:0000311!2.62e-08!6;CL:0000079!2.62e-08!6;CL:0000237!2.62e-08!6;CL:0000036!2.62e-08!6;CL:0000357!2.62e-08!6;CL:0000114!2.62e-08!6;CL:0000150!1.72e-07!9;CL:0000575!3.42e-07!2;CL:0002327!4.16e-07!4 | |ontology_enrichment_celltype=CL:0002076!1.34e-28!43;CL:0000066!9.71e-21!254;CL:0002159!1.17e-20!13;CL:0002368!1.25e-20!13;CL:0000223!4.36e-19!59;CL:0000622!8.49e-14!5;CL:0002251!1.86e-13!21;CL:0002202!6.77e-12!9;CL:0002632!6.77e-12!9;CL:0000244!1.50e-11!4;CL:0000731!1.50e-11!4;CL:0000154!1.96e-11!6;CL:0002328!4.99e-10!3;CL:0000068!5.61e-10!3;CL:0000069!5.61e-10!3;CL:0000307!5.61e-10!3;CL:0000377!5.61e-10!3;CL:0002077!6.46e-10!33;CL:0000349!3.08e-09!3;CL:0002577!3.08e-09!3;CL:0002166!3.63e-09!3;CL:0002623!5.20e-09!3;CL:0000362!5.79e-09!8;CL:0002621!9.69e-09!3;CL:0000076!1.33e-08!62;CL:0000240!2.62e-08!6;CL:0000311!2.62e-08!6;CL:0000079!2.62e-08!6;CL:0000237!2.62e-08!6;CL:0000036!2.62e-08!6;CL:0000357!2.62e-08!6;CL:0000114!2.62e-08!6;CL:0000150!1.72e-07!9;CL:0000575!3.42e-07!2;CL:0002327!4.16e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.55e-26;14!CL:0002368;7.73e-24;13!CL:0002076;3.99e-23;42!CL:0002202;1.42e-16;9!CL:0002632;1.42e-16;9!CL:0002328;1.57e-13;3!CL:0000307;1.93e-13;3!CL:0000622;1.26e-12;5!CL:0002077;2.45e-12;34!CL:0002577;3.27e-12;3!CL:0002166;5.01e-12;3!CL:0002621;5.01e-12;3!CL:0000240;2.58e-11;6!CL:0000311;2.58e-11;6!CL:0000079;2.58e-11;6!CL:0000237;2.58e-11;6!CL:0002251;2.87e-11;20!CL:0000362;6.47e-11;9!CL:0000154;1.55e-10;6!CL:0000244;1.30e-09;4!CL:0000731;1.30e-09;4!CL:0000575;1.56e-09;2!CL:0002327;1.98e-09;4!CL:0000317;2.12e-08;2!CL:1000448;2.12e-08;2!CL:0002308;2.12e-08;2!CL:0002140;2.12e-08;2!CL:0000312;4.32e-08;5!CL:0000150;4.85e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.73e-29,42;CL:0002159,8.28e-27,14;CL:0002368,7.47e-24,13;CL:0000066,4.77e-22,253;CL:0000223,4.80e-20,58;CL:0002202,1.43e-16,9;CL:0002632,1.43e-16,9;CL:0002077,2.93e-14,34;CL:0002328,1.61e-13,3;CL:0000068,1.90e-13,3;CL:0000069,1.90e-13,3;CL:0000307,1.90e-13,3;CL:0000377,1.90e-13,3;CL:0000622,1.19e-12,5;CL:0002577,2.10e-12,3;CL:0002166,2.65e-12,3;CL:0002621,1.06e-11,3;CL:0000240,2.29e-11,6;CL:0000311,2.29e-11,6;CL:0000079,2.29e-11,6;CL:0000237,2.29e-11,6;CL:0000036,2.29e-11,6;CL:0000357,2.29e-11,6;CL:0000114,2.29e-11,6;CL:0002251,3.42e-11,20;CL:0000362,5.60e-11,9;CL:0000154,1.48e-10,6;CL:0000244,1.24e-09,4;CL:0000731,1.24e-09,4;CL:0002327,1.48e-09,4;CL:0000575,1.60e-09,2;CL:0002321,1.57e-08,250;CL:0000317,1.75e-08,2;CL:1000448,1.75e-08,2;CL:0002308,1.75e-08,2;CL:0002140,1.75e-08,2;CL:0000312,4.13e-08,5;CL:0000076,9.99e-08,63;CL:0000150,4.71e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;1.93e-13;3!CL:0000223;2.30e-11;58!CL:0000357;2.58e-11;6!CL:0000114;2.58e-11;6 | |||
|ontology_enrichment_disease=DOID:1749!1.70e-10!14 | |ontology_enrichment_disease=DOID:1749!1.70e-10!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.61e-18!72;UBERON:0000166!9.75e-16!21;UBERON:0004119!3.17e-15!169;UBERON:0000925!3.17e-15!169;UBERON:0006595!3.17e-15!169;UBERON:0000161!1.40e-13!35;UBERON:0000365!1.53e-13!5;UBERON:0000165!2.61e-13!28;UBERON:0000930!2.61e-13!28;UBERON:0007196!3.52e-12!14;UBERON:0001558!3.52e-12!14;UBERON:0005910!3.18e-11!6;UBERON:0000065!1.17e-10!53;UBERON:0003102!1.85e-10!95;UBERON:0003126!4.94e-10!7;UBERON:0001005!4.94e-10!7;UBERON:0004815!4.99e-10!3;UBERON:0002031!4.99e-10!3;UBERON:0001444!3.21e-09!48;UBERON:0003408!9.27e-09!10;UBERON:0001949!9.69e-09!3;UBERON:0005631!1.50e-08!14;UBERON:0000158!1.50e-08!14;UBERON:0002185!1.36e-07!4;UBERON:0000077!1.79e-07!130;UBERON:0001044!2.08e-07!6;UBERON:0003293!2.08e-07!6;UBERON:0003294!2.08e-07!6;UBERON:0010047!2.08e-07!6;UBERON:0000167!2.08e-07!6;UBERON:0000072!3.47e-07!46;UBERON:0001007!3.71e-07!155;UBERON:0001555!3.71e-07!155;UBERON:0007026!3.71e-07!155;UBERON:0001911!4.16e-07!4;UBERON:0005333!4.16e-07!4;UBERON:0008425!4.16e-07!4;UBERON:0005311!4.16e-07!4;UBERON:0001987!5.21e-07!4;UBERON:0004340!5.21e-07!4;UBERON:0001708!5.88e-07!4;UBERON:0001704!5.88e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.57e-13;3!UBERON:0002031;1.57e-13;3!UBERON:0001949;5.01e-12;3!UBERON:0000486;3.66e-11;12!UBERON:0000165;1.18e-09;28!UBERON:0007196;1.20e-09;15!UBERON:0001558;1.20e-09;15!UBERON:0001911;1.98e-09;4!UBERON:0001987;2.84e-09;4!UBERON:0001708;3.89e-09;4!UBERON:0008895;3.89e-09;4!UBERON:0002419;2.12e-08;2!UBERON:0007771;2.12e-08;2!UBERON:0003297;2.12e-08;2!UBERON:0001821;2.12e-08;2!UBERON:0003487;2.12e-08;2!UBERON:0001820;2.12e-08;2!UBERON:0002185;2.84e-08;5!UBERON:0000365;9.04e-08;5!UBERON:0011159;2.15e-07;5!UBERON:0003729;3.56e-07;13!UBERON:0010371;9.27e-07;31!UBERON:0000161;9.67e-07;19!UBERON:0000166;9.67e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,8.38e-14,99;UBERON:0004815,1.61e-13,3;UBERON:0002031,1.61e-13,3;UBERON:0004119,2.27e-12,160;UBERON:0000925,2.27e-12,160;UBERON:0006595,2.27e-12,160;UBERON:0001949,1.06e-11,3;UBERON:0001004,2.59e-11,74;UBERON:0000033,1.79e-10,56;UBERON:0000166,7.64e-10,22;UBERON:0007196,1.20e-09,15;UBERON:0001558,1.20e-09,15;UBERON:0001911,1.48e-09,4;UBERON:0005333,1.48e-09,4;UBERON:0008425,1.48e-09,4;UBERON:0005311,1.48e-09,4;UBERON:0001987,2.04e-09,4;UBERON:0004340,2.04e-09,4;UBERON:0001708,2.43e-09,4;UBERON:0008895,2.43e-09,4;UBERON:0000153,3.62e-09,62;UBERON:0007811,3.62e-09,62;UBERON:0000165,3.76e-09,29;UBERON:0000930,3.76e-09,29;UBERON:0000161,9.55e-09,36;UBERON:0002419,1.75e-08,2;UBERON:0007771,1.75e-08,2;UBERON:0003297,1.75e-08,2;UBERON:0001821,1.75e-08,2;UBERON:0003487,1.75e-08,2;UBERON:0001820,1.75e-08,2;UBERON:0005089,1.75e-08,2;UBERON:0005088,1.75e-08,2;UBERON:0002185,2.88e-08,5;UBERON:0000365,8.75e-08,5;UBERON:0011159,1.49e-07,5;UBERON:0001444,1.99e-07,49;UBERON:0003729,3.96e-07,13;UBERON:0005157,8.83e-07,47;UBERON:0000065,9.54e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4690032650996,13.5542663450213,9.61360426433648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37154345951051,18.9100065820059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,1.09098448236334,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74375713521564,16.8602629886429,11.158715937691,3.88871469665824,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,1.51183915378974,1.84307626415102,1.43293636324557,1.74380363108377,21.0860473540866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85004114314015,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00506470303285,2.67034867914099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.95018073810956,0,0,0,0,0,0,0,0,0,1.32227932288782,1.15314040419064,0.765676274967505,1.6185244936888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.02421422896238,15.4169523373231,11.9780083347455,0,1.29151611801369,3.36942951335251,9.75546337780687,0.459446800413919,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,1.53580351049616,0,0,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,1.55182426381471,0,0.451961481561065,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36695500158826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47041157728778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11903606175556,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,1.83428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,2.27937780579341,3.0729325876911,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0.0645889098360061,0.124149428591716,0,0,0,3.04803447055746,1.02669990325584,0.404112318087525,0.286888821570705,0.99798106963804,0.162806537221949,0,0,0,0,0,2.44137706989443,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4690032650996,13.5542663450213,9.61360426433648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37154345951051,18.9100065820059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,1.09098448236334,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74375713521564,16.8602629886429,11.158715937691,3.88871469665824,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,1.51183915378974,1.84307626415102,1.43293636324557,1.74380363108377,21.0860473540866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85004114314015,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00506470303285,2.67034867914099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,1.95018073810956,0,0,0,0,0,0,0,0,0,1.32227932288782,1.15314040419064,0.765676274967505,1.6185244936888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.02421422896238,15.4169523373231,11.9780083347455,0,1.29151611801369,3.36942951335251,9.75546337780687,0.459446800413919,0,0,0,0,0,0,0,0,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,1.53580351049616,0,0,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0,0,1.55182426381471,0,0.451961481561065,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36695500158826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47041157728778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11903606175556,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,1.83428598521679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,2.27937780579341,3.0729325876911,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0.0645889098360061,0.124149428591716,0,0,0,3.04803447055746,1.02669990325584,0.404112318087525,0.286888821570705,0.99798106963804,0.162806537221949,0,0,0,0,0,2.44137706989443,0,0,0 | ||
|short_description=p@chr12:52913812..52913837,+ | |short_description=p@chr12:52913812..52913837,+ | ||
}} | }} |
Latest revision as of 09:38, 24 July 2015
Short description: | p@chr12:52913812..52913837, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52913812..52913837, + |
Coexpression cluster: | C207_Corneal_Keratinocyte_Esophageal_Mammary_Bronchial_Urothelial_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data