FFCP PHASE1:Hg19::chr12:54651996..54652005,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23468 | |EntrezGene=23468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1555 | |HGNC=1555 | ||
|TSSclassifier=strong | |||
|UniProt=F8VNY3 | |UniProt=F8VNY3 | ||
|association_with_transcript=205bp_to_ENST00000552562_5end | |association_with_transcript=205bp_to_ENST00000552562_5end | ||
|cluster_id=chr12:54651996..54652005,- | |||
|coexpression_cluster_id=C136 | |||
|description=CAGE_peak_52_at_CBX5_5end | |description=CAGE_peak_52_at_CBX5_5end | ||
|id=chr12:54651996..54652005,- | |id=chr12:54651996..54652005,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;7.72e-21;10!UBERON:0007687;7.72e-21;10!UBERON:0006215;9.45e-18;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;3.99e-50;1!DOID:3350;7.14e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.58e-50,1;DOID:3350,9.18e-26,2 | |||
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|short_description=p52@CBX5 | |short_description=p52@CBX5 | ||
}} | }} |
Latest revision as of 05:27, 19 September 2015
Short description: | p52@CBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_52_at_CBX5_5end |
Coexpression cluster: | C136_Wilms_extraskeletal_anaplastic_rhabdomyosarcoma_cholangiocellular_nonsmall_neuroectodermal |
Association with transcript: | 205bp_to_ENST00000552562_5end |
EntrezGene: | CBX5 |
HGNC: | 1555 |
UniProt: | F8VNY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.32e-09 | 6 |
rhombic lip | 1.32e-09 | 6 |
kidney | 1.07e-08 | 26 |
kidney mesenchyme | 1.07e-08 | 26 |
upper urinary tract | 1.07e-08 | 26 |
kidney rudiment | 1.07e-08 | 26 |
kidney field | 1.07e-08 | 26 |
cavitated compound organ | 1.86e-07 | 31 |
regional part of metencephalon | 7.91e-07 | 9 |
metencephalon | 7.91e-07 | 9 |
future metencephalon | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.58e-50 | 1 |
mesenchymal cell neoplasm | 9.18e-26 | 2 |