FFCP PHASE1:Hg19::chr17:73723511..73723523,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3691 | |EntrezGene=3691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6158 | |HGNC=6158 | ||
|TSSclassifier=strong | |||
|UniProt=Q2VP98 | |UniProt=Q2VP98 | ||
|association_with_transcript=-206bp_to_BC109238_5end | |association_with_transcript=-206bp_to_BC109238_5end | ||
|cluster_id=chr17:73723511..73723523,+ | |||
|description=CAGE_peak_8_at_ITGB4_5end | |description=CAGE_peak_8_at_ITGB4_5end | ||
|id=chr17:73723511..73723523,+ | |id=chr17:73723511..73723523,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.27e-26!254;CL:0002076!1.94e-24!43;CL:0000223!7.89e-19!59;CL:0002251!7.49e-12!21;CL:0002368!4.95e-11!13;CL:0000076!6.01e-09!62;CL:0002159!1.88e-08!13;CL:0000244!2.91e-07!4;CL:0000731!2.91e-07!4 | |ontology_enrichment_celltype=CL:0000066!1.27e-26!254;CL:0002076!1.94e-24!43;CL:0000223!7.89e-19!59;CL:0002251!7.49e-12!21;CL:0002368!4.95e-11!13;CL:0000076!6.01e-09!62;CL:0002159!1.88e-08!13;CL:0000244!2.91e-07!4;CL:0000731!2.91e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002368;6.05e-31;13!CL:0002076;7.00e-21;42!CL:0000307;8.14e-20;3!CL:0002202;4.98e-18;9!CL:0002632;4.98e-18;9!CL:0000240;3.19e-17;6!CL:0000311;3.19e-17;6!CL:0000079;3.19e-17;6!CL:0000237;3.19e-17;6!CL:0002159;4.09e-16;14!CL:0000244;6.62e-16;4!CL:0000731;6.62e-16;4!CL:0000312;4.05e-12;5!CL:0000622;4.05e-12;5!CL:0000362;1.07e-11;9!CL:0000154;3.49e-10;6!CL:0002328;5.60e-10;3!CL:0002623;2.40e-09;3!CL:0002251;7.99e-08;20!CL:0002327;1.17e-07;4!CL:0002336;1.26e-07;1!CL:0002261;1.26e-07;1!CL:0002170;1.26e-07;1!CL:0000150;6.09e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.92e-31,13;CL:0002076,1.33e-27,42;CL:0000223,3.49e-22,58;CL:0000068,7.90e-20,3;CL:0000069,7.90e-20,3;CL:0000307,7.90e-20,3;CL:0000377,7.90e-20,3;CL:0002202,4.65e-18,9;CL:0002632,4.65e-18,9;CL:0000240,5.92e-17,6;CL:0000311,5.92e-17,6;CL:0000079,5.92e-17,6;CL:0000237,5.92e-17,6;CL:0000036,5.92e-17,6;CL:0000357,5.92e-17,6;CL:0000114,5.92e-17,6;CL:0000066,1.37e-16,253;CL:0002159,4.27e-16,14;CL:0000244,6.80e-16,4;CL:0000731,6.80e-16,4;CL:0000622,2.61e-12,5;CL:0000312,5.62e-12,5;CL:0000362,1.42e-11,9;CL:0000154,2.42e-10,6;CL:0002328,5.25e-10,3;CL:0002623,1.38e-09,3;CL:0002321,4.63e-08,250;CL:0002251,7.42e-08,20;CL:0002327,1.35e-07,4;CL:0002336,1.87e-07,1;CL:0002261,1.87e-07,1;CL:0002170,1.87e-07,1;CL:0000150,4.80e-07,9;CL:0000076,8.42e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000377;8.14e-20;3!CL:0000357;3.19e-17;6!CL:0000114;3.19e-17;6!CL:0000223;8.56e-12;58 | |||
|ontology_enrichment_disease=DOID:305!1.01e-09!106;DOID:299!2.93e-08!25;DOID:1749!7.60e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.84e-14!169;UBERON:0000925!1.84e-14!169;UBERON:0006595!1.84e-14!169;UBERON:0004121!8.06e-09!169;UBERON:0005910!1.62e-08!6;UBERON:0000064!2.05e-08!219;UBERON:0001007!2.13e-08!155;UBERON:0001555!2.13e-08!155;UBERON:0007026!2.13e-08!155;UBERON:0000924!2.63e-08!173;UBERON:0006601!2.63e-08!173;UBERON:0005631!6.26e-08!14;UBERON:0000158!6.26e-08!14;UBERON:0000365!6.41e-08!5;UBERON:0000062!3.38e-07!511;UBERON:0003729!4.79e-07!5;UBERON:0000161!5.62e-07!35;UBERON:0001004!5.86e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;7.89e-13;5!UBERON:0005910;9.00e-11;6!UBERON:0007196;9.59e-11;15!UBERON:0001558;9.59e-11;15!UBERON:0004815;5.60e-10;3!UBERON:0002031;5.60e-10;3!UBERON:0000486;4.50e-09;12!UBERON:0003126;8.48e-09;7!UBERON:0001005;8.48e-09;7!UBERON:0001911;1.17e-07;4!UBERON:0001003;4.60e-07;15!UBERON:0007376;4.60e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,8.06e-13,5;UBERON:0005910,9.16e-11,6;UBERON:0007196,9.21e-11,15;UBERON:0001558,9.21e-11,15;UBERON:0001004,2.02e-10,74;UBERON:0004815,5.25e-10,3;UBERON:0002031,5.25e-10,3;UBERON:0003126,8.38e-09,7;UBERON:0001005,8.38e-09,7;UBERON:0004119,2.52e-08,160;UBERON:0000925,2.52e-08,160;UBERON:0006595,2.52e-08,160;UBERON:0001911,1.35e-07,4;UBERON:0005333,1.35e-07,4;UBERON:0008425,1.35e-07,4;UBERON:0005311,1.35e-07,4;UBERON:0003102,3.81e-07,99;UBERON:0001003,5.42e-07,15;UBERON:0007376,5.42e-07,15;UBERON:0007383,5.42e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0,0.612002073732759,0.940364164434263,0,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,2.71085326900425,5.9160641626686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.175669571386252,0,0.728590576585084,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,1.09098448236334,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,1.53650399572076,2.24803506515239,1.00528972411631,1.01847289674383,0,0,0,0.115930404975077,0,0,0,0,2.37061319387782,0,0,0,0,0,1.6798212819886,0.708875486211932,0.806026704325635,2.3250715081117,3.06706143332169,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,7.81975234182811,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0.574265537996172,2.60024098414608,0,0,0,0,0,0,0,0,0,2.97512847649761,2.88285101047659,0.765676274967505,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53955380360819,2.68120910214315,1.08890984861323,0,3.44404298136984,11.7930032967338,2.66058092122005,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.95497793895076,0,1.22864280839693,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,1.137934482855,0.762760950878299,0.236387681767936,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0.139423744278603,0.230850775511391,0,0.23056390438806,0.0897576444097721,0.108647371922008,0.31900115973192,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0.394584402849391,0,0,0.126373159256976,0,0,1.32930774541437,0.661983911750998,0,0,0,0,0.347119476670262,0,0.174118413160805,0,0,0,0.0730893170861856,0,0.290967049465258,0,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,0.640358984218058,0.39961921916426,0.432271251462318,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0.858452096273142,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0.670869375198532,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0.214441591374926,1.04397716786085,0,0,0,0.71635536432595,0.308801447160972,0.657852148736121,0,0.578742114812744,0.337884881306145,0,0,0,0.276516872303462,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,3.4851433719119,0.924205329202706,0,0,0,0,0,0,0.523813388962845,0.655087670040387,0.887136517302272,0,0,0,0,0,0.548257766857182,0,0,0.894336993477167,0,0,0,0,0.177404740325278,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,1.86494547746733,1.7071847709395,0,0,0,0,0.846774100381858,0.22910686854405,0.31020638566432,0,0.223710863595585,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0.281951753939561,0,0,0.178553938605658,0.705789743431384,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0.342233301085281,0,0.0717222053926763,0,0.162806537221949,0.106727345877715,0,1.3473780315988,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0,0.612002073732759,0.940364164434263,0,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0,2.71085326900425,5.9160641626686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.665188192387692,0.175669571386252,0,0.728590576585084,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,1.09098448236334,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,1.53650399572076,2.24803506515239,1.00528972411631,1.01847289674383,0,0,0,0.115930404975077,0,0,0,0,2.37061319387782,0,0,0,0,0,1.6798212819886,0.708875486211932,0.806026704325635,2.3250715081117,3.06706143332169,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,7.81975234182811,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0.574265537996172,2.60024098414608,0,0,0,0,0,0,0,0,0,2.97512847649761,2.88285101047659,0.765676274967505,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53955380360819,2.68120910214315,1.08890984861323,0,3.44404298136984,11.7930032967338,2.66058092122005,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.95497793895076,0,1.22864280839693,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.260427761085233,0,0,1.137934482855,0.762760950878299,0.236387681767936,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0.139423744278603,0.230850775511391,0,0.23056390438806,0.0897576444097721,0.108647371922008,0.31900115973192,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0,0.394584402849391,0,0,0.126373159256976,0,0,1.32930774541437,0.661983911750998,0,0,0,0,0.347119476670262,0,0.174118413160805,0,0,0,0.0730893170861856,0,0.290967049465258,0,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,0.640358984218058,0.39961921916426,0.432271251462318,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0.858452096273142,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0.670869375198532,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0.343395705182793,0,0,0,0.214441591374926,1.04397716786085,0,0,0,0.71635536432595,0.308801447160972,0.657852148736121,0,0.578742114812744,0.337884881306145,0,0,0,0.276516872303462,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0.11796972334774,3.4851433719119,0.924205329202706,0,0,0,0,0,0,0.523813388962845,0.655087670040387,0.887136517302272,0,0,0,0,0,0.548257766857182,0,0,0.894336993477167,0,0,0,0,0.177404740325278,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,1.86494547746733,1.7071847709395,0,0,0,0,0.846774100381858,0.22910686854405,0.31020638566432,0,0.223710863595585,0.098150233615243,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0.281951753939561,0,0,0.178553938605658,0.705789743431384,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0.0620747142958579,0.112131862580613,0,0,0,0.342233301085281,0,0.0717222053926763,0,0.162806537221949,0.106727345877715,0,1.3473780315988,0,0,0,0,0,0 | ||
|short_description=p8@ITGB4 | |short_description=p8@ITGB4 | ||
}} | }} |
Latest revision as of 12:04, 17 September 2015
Short description: | p8@ITGB4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ITGB4_5end |
Coexpression cluster: | NA |
Association with transcript: | -206bp_to_BC109238_5end |
EntrezGene: | ITGB4 |
HGNC: | 6158 |
UniProt: | Q2VP98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 8.06e-13 | 5 |
transitional epithelium | 9.16e-11 | 6 |
tracheobronchial tree | 9.21e-11 | 15 |
lower respiratory tract | 9.21e-11 | 15 |
respiratory system | 2.02e-10 | 74 |
lower respiratory tract epithelium | 5.25e-10 | 3 |
epithelium of bronchus | 5.25e-10 | 3 |
trachea | 8.38e-09 | 7 |
respiratory airway | 8.38e-09 | 7 |
endoderm-derived structure | 2.52e-08 | 160 |
endoderm | 2.52e-08 | 160 |
presumptive endoderm | 2.52e-08 | 160 |
mammary gland | 1.35e-07 | 4 |
mammary bud | 1.35e-07 | 4 |
mammary ridge | 1.35e-07 | 4 |
mammary placode | 1.35e-07 | 4 |
surface structure | 3.81e-07 | 99 |
skin epidermis | 5.42e-07 | 15 |
outer epithelium | 5.42e-07 | 15 |
enveloping layer of ectoderm | 5.42e-07 | 15 |