FFCP PHASE1:Hg19::chr12:66232788..66232793,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:66232788..66232793,+ | |||
|coexpression_cluster_id=C3318 | |||
|description=CAGE_peak_at_chr12:66232788..66232793,+ | |description=CAGE_peak_at_chr12:66232788..66232793,+ | ||
|id=chr12:66232788..66232793,+ | |id=chr12:66232788..66232793,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.69e-16!180;CL:0000057!7.91e-11!75;CL:0002321!3.71e-10!248;CL:0000012!6.36e-10!682;CL:0000548!6.56e-10!679;CL:0000004!6.56e-10!679;CL:0000255!6.56e-10!679;CL:0000220!8.80e-10!246;CL:0002620!5.04e-09!23;CL:0002371!6.84e-08!591;CL:0000680!4.14e-07!57;CL:0000056!4.14e-07!57;CL:0000355!4.14e-07!57 | |ontology_enrichment_celltype=CL:0000055!3.69e-16!180;CL:0000057!7.91e-11!75;CL:0002321!3.71e-10!248;CL:0000012!6.36e-10!682;CL:0000548!6.56e-10!679;CL:0000004!6.56e-10!679;CL:0000255!6.56e-10!679;CL:0000220!8.80e-10!246;CL:0002620!5.04e-09!23;CL:0002371!6.84e-08!591;CL:0000680!4.14e-07!57;CL:0000056!4.14e-07!57;CL:0000355!4.14e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000680;2.69e-20;7!CL:0000188;4.16e-15;9!CL:0000056;9.31e-13;4!CL:0000515;7.99e-10;3!CL:0000594;2.90e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,7.02e-15,9;CL:0000515,1.05e-12,4;CL:0000594,3.49e-09,3;CL:0000680,9.27e-09,58;CL:0000056,9.27e-09,58;CL:0000355,9.27e-09,58 | |||
|ontology_enrichment_development_v019=CL:0000515;9.31e-13;4 | |||
|ontology_enrichment_disease=DOID:120!2.11e-07!27;DOID:193!2.78e-07!29;DOID:2394!8.06e-07!14 | |ontology_enrichment_disease=DOID:120!2.11e-07!27;DOID:193!2.78e-07!29;DOID:2394!8.06e-07!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!2.77e-09!82;UBERON:0003102!9.37e-09!95;UBERON:0000914!1.05e-07!83;UBERON:0002329!1.05e-07!83;UBERON:0003077!1.05e-07!83;UBERON:0003059!1.05e-07!83;UBERON:0007282!1.05e-07!83;UBERON:0009618!1.05e-07!83;UBERON:0007285!1.05e-07!83;UBERON:0004290!1.15e-07!70;UBERON:0002199!3.71e-07!45;UBERON:0002416!3.71e-07!45;UBERON:0002097!6.63e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.43e-16;16!UBERON:0002036;1.43e-16;16!UBERON:0002385;1.35e-10;31!UBERON:0001015;1.35e-10;31!UBERON:0000383;1.35e-10;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.03e-13,83;UBERON:0002329,9.31e-10,71;UBERON:0003059,9.31e-10,71;UBERON:0007282,9.31e-10,71;UBERON:0004290,9.31e-10,71;UBERON:0009618,9.31e-10,71;UBERON:0003077,1.47e-09,72;UBERON:0007285,1.47e-09,72;UBERON:0007524,2.30e-09,73;UBERON:0007503,1.77e-08,78;UBERON:0005256,3.39e-08,122;UBERON:0001134,5.87e-08,62;UBERON:0002036,5.87e-08,62;UBERON:0003082,5.87e-08,62;UBERON:0002385,1.35e-07,64;UBERON:0001015,1.35e-07,64;UBERON:0000383,1.35e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0,0,0,0.730310090387373,0.975865597581014,0.246242116153576,0,0,0.286235987131057,0.547497700291537,0.502170558379211,0.305653622991805,0.246301768349837,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,2.17430079477356,1.77383517970051,0.790513071238134,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0.516833518338658,1.42306505074684,0,0,0,0,0,0,0.357198913136319,0.673588117878509,0.563057402416611,0,0,0.366403487860815,0,0,0,0,1.2663051166458,6.62045904066094,0,0.709336764396714,0.560677600142307,0,0.24666754841716,0.622422070799533,0.942974704487816,2.12500474047496,0.454072282934794,0,0.234321431833797,0.936480230490962,0.570471821544449,0.448346041655403,1.17434498643765,1.94247533241758,1.96631129383148,1.22492502752936,6.01888154827663,0.103325781175765,0,0.494533858557114,0,0,2.86171393721913,1.12606667884768,0.831192346452549,0,0.30648779579902,0,0,0.358779271377724,0,0.211931901159562,1.20036438433761,0.309157587715317,0.257640540045629,0.37223371266318,1.18143432568886,0,0.252433774244115,0,0.646584227275248,0.710019185033229,0.403008392910561,0.339121184620975,1.35282597214308,3.54569956768085,0.286804595389004,0.121973706129595,0.397589304964456,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0.343135620597051,0.109750285408626,0,0.301586917234893,0.555530670951178,0,0,0,0.115930404975077,0,0.144366447761074,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.53735113621709,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.560655421726804,0,0.51336800074665,1.55126058909333,0,0,0,1.04007436911366,0.514414748524284,0,1.0656887160644,0,0,0,0.325736184293735,0.710783897485092,0,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,0,4.27910715122155,2.46128221334885,6.1642896765115,1.25342674267927,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.713715955188647,0,0.234282829985426,0,0,0,0,0.921845842708516,0.868836144680828,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.532685175939381,0.492762936082855,0,0.697262270759755,0,1.40354529212299,0.184161977871793,0,1.0925470080403,0,0,0.308061348417659,0,0,0.422206515571503,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0.574265537996172,0,0,0.48335359146061,1.23238893691716,1.07452572308291,2.89456802217514,1.93356440762893,2.0302337147992,1.02271952899321,0,0.165284915360978,0.384380134730212,7.91198817466422,0,0,1.25924938732256,0,0.308033580176089,0,0.869932992075073,0.37064843820784,0.143124886741991,2.60510858551767,1.58189712359363,0,0.511795582622668,0,0.636406495851874,0,0.899362287916574,1.64722217841633,0.235624804691373,0.202182481573316,0,0,0,0.243713489631284,0,0.409499734223957,0.282810863907425,0,0,1.32687795048244,0,0,0,0,0.30982349809975,0,1.00387946542836,0,0,0.354761064070598,0,0,0,1.04980416073495,0.769776901804097,0,0,0,0.43050537267123,0,0,3.21612760289743,0,0,0,0,0,0,0,0,1.1750647824022,0,0.245040215981032,0,0,0,0,0,0,3.17510374085824,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0.485442086998054,0.111443384277478,1.70481688083848,0,0,0,0,0,0.445234820091624,0,0,0.19924798825107,0,0,0,0,0.933118762985422,3.14539229015644,0,0,0,0,0,0,0,0,0,0,0,2.95862965542299,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0.816164040795739,0,0.432777279484182,0,0,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0.103688191397247,0,0.330991955875499,0,0,1.70765727617876,0.277349346026277,0,0.195984794828755,0.174118413160805,0,1.0319161948297,0,0.0730893170861856,0,0,3.35373281427701,0,0.411125773940253,0.993573058514948,0,0,0.240476460754601,0,0,0.144090417154106,1.71804894248874,0,0,1.11827282008889,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0.472699093843342,0.0824158583811665,0.471824806979294,0.0984274815147488,0,0,0,0.160753148465019,0.550157746388935,0,0,0,0,0,0,0.262272940674991,0.739202355635845,0,0.575745591958336,0,0,0,0,0,0.326587360109409,1.19730191562487,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.415045904808692,0.74988244777264,0.909894705249887,0.285465333544967,0.470531639396343,0,0,0.597019211547496,0.233713309847224,0.554805861502613,0.568209015825267,1.25783950876288,1.77962244319307,0.457680136793847,1.20984739010591,0.777186002913902,1.03498604992744,1.11507737014592,0.899606224327209,0.310525913752519,0.829412415681711,0.265841714557995,1.5652351854352,0.300515217994437,0.380805212168795,0,3.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| ||
|short_description=p@chr12:66232788..66232793,+ | |short_description=p@chr12:66232788..66232793,+ | ||
}} | }} |
Latest revision as of 11:29, 24 July 2015
Short description: | p@chr12:66232788..66232793, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:66232788..66232793, + |
Coexpression cluster: | C3318_Small_Myoblast_Fibroblast_retinoblastoma_mesenchymal_prostate_Gingival |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 7.02e-15 | 9 |
skeletal muscle myoblast | 1.05e-12 | 4 |
skeletal muscle satellite cell | 3.49e-09 | 3 |
muscle precursor cell | 9.27e-09 | 58 |
myoblast | 9.27e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.27e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 1.03e-13 | 83 |
somite | 9.31e-10 | 71 |
presomitic mesoderm | 9.31e-10 | 71 |
presumptive segmental plate | 9.31e-10 | 71 |
dermomyotome | 9.31e-10 | 71 |
trunk paraxial mesoderm | 9.31e-10 | 71 |
paraxial mesoderm | 1.47e-09 | 72 |
presumptive paraxial mesoderm | 1.47e-09 | 72 |
dense mesenchyme tissue | 2.30e-09 | 73 |
epithelial vesicle | 1.77e-08 | 78 |
trunk mesenchyme | 3.39e-08 | 122 |
skeletal muscle tissue | 5.87e-08 | 62 |
striated muscle tissue | 5.87e-08 | 62 |
myotome | 5.87e-08 | 62 |
muscle tissue | 1.35e-07 | 64 |
musculature | 1.35e-07 | 64 |
musculature of body | 1.35e-07 | 64 |