FFCP PHASE1:Hg19::chr18:18572813..18572825,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:18572813..18572825,- | |||
|coexpression_cluster_id=C829 | |||
|description=CAGE_peak_at_chr18:18572813..18572825,- | |description=CAGE_peak_at_chr18:18572813..18572825,- | ||
|id=chr18:18572813..18572825,- | |id=chr18:18572813..18572825,- | ||
|ontology_enrichment_celltype=CL:0000860!2.24e-13!45;CL:0002057!2.81e-13!42;CL:0002087!7.38e-13!119;CL:0002032!1.03e-10!165;CL:0000837!1.03e-10!165;CL:0002031!1.13e-10!124;CL:0002194!1.33e-10!63;CL:0000576!1.33e-10!63;CL:0000040!1.33e-10!63;CL:0000559!1.33e-10!63;CL:0002009!3.05e-10!65;CL:0000037!4.11e-10!172;CL:0000566!4.11e-10!172;CL:0000738!4.62e-10!140;CL:0000766!2.08e-08!76;CL:0000557!2.10e-08!71;CL:0000839!2.14e-08!70;CL:0000988!4.66e-08!182;CL:0000763!1.41e-07!112;CL:0000049!1.41e-07!112;CL:0000134!8.70e-07!358 | |ontology_enrichment_celltype=CL:0000860!2.24e-13!45;CL:0002057!2.81e-13!42;CL:0002087!7.38e-13!119;CL:0002032!1.03e-10!165;CL:0000837!1.03e-10!165;CL:0002031!1.13e-10!124;CL:0002194!1.33e-10!63;CL:0000576!1.33e-10!63;CL:0000040!1.33e-10!63;CL:0000559!1.33e-10!63;CL:0002009!3.05e-10!65;CL:0000037!4.11e-10!172;CL:0000566!4.11e-10!172;CL:0000738!4.62e-10!140;CL:0000766!2.08e-08!76;CL:0000557!2.10e-08!71;CL:0000839!2.14e-08!70;CL:0000988!4.66e-08!182;CL:0000763!1.41e-07!112;CL:0000049!1.41e-07!112;CL:0000134!8.70e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.93e-13;33!CL:0002057;3.93e-13;33!CL:0000473;2.67e-10;39!CL:0000234;2.67e-10;39!CL:0000576;3.67e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.18e-16,42;CL:0002057,5.18e-16,42;CL:0000473,3.86e-15,48;CL:0000234,3.86e-15,48;CL:0002087,1.66e-12,115;CL:0002032,2.48e-11,161;CL:0000837,2.48e-11,161;CL:0002194,5.44e-11,59;CL:0000576,5.44e-11,59;CL:0000040,5.44e-11,59;CL:0000559,5.44e-11,59;CL:0002009,7.18e-11,61;CL:0002031,1.13e-10,120;CL:0000037,1.72e-10,168;CL:0000738,2.94e-10,136;CL:0000988,1.08e-08,177;CL:0000557,1.16e-08,67;CL:0000766,1.20e-08,72;CL:0000839,2.16e-08,66;CL:0000763,2.85e-08,108;CL:0000049,2.85e-08,108;CL:0000134,8.61e-08,354;CL:0002320,5.93e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.44e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.91e-08!80;UBERON:0001474!3.14e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.57e-08,76;UBERON:0001474,3.35e-07,82;UBERON:0002384,6.58e-07,371 | |||
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| ||
|short_description=p@chr18:18572813..18572825,- | |short_description=p@chr18:18572813..18572825,- | ||
}} | }} |
Latest revision as of 23:49, 25 July 2015
Short description: | p@chr18:18572813..18572825, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:18572813..18572825, - |
Coexpression cluster: | C829_Neutrophils_CD14_Monocytederived_Prostate_acute_CD4_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.18e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.18e-16 | 42 |
defensive cell | 3.86e-15 | 48 |
phagocyte | 3.86e-15 | 48 |
nongranular leukocyte | 1.66e-12 | 115 |
hematopoietic oligopotent progenitor cell | 2.48e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.48e-11 | 161 |
monopoietic cell | 5.44e-11 | 59 |
monocyte | 5.44e-11 | 59 |
monoblast | 5.44e-11 | 59 |
promonocyte | 5.44e-11 | 59 |
macrophage dendritic cell progenitor | 7.18e-11 | 61 |
hematopoietic lineage restricted progenitor cell | 1.13e-10 | 120 |
hematopoietic stem cell | 1.72e-10 | 168 |
leukocyte | 2.94e-10 | 136 |
hematopoietic cell | 1.08e-08 | 177 |
granulocyte monocyte progenitor cell | 1.16e-08 | 67 |
myeloid leukocyte | 1.20e-08 | 72 |
myeloid lineage restricted progenitor cell | 2.16e-08 | 66 |
myeloid cell | 2.85e-08 | 108 |
common myeloid progenitor | 2.85e-08 | 108 |
mesenchymal cell | 8.61e-08 | 354 |
connective tissue cell | 5.93e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.57e-08 | 76 |
bone element | 3.35e-07 | 82 |
connective tissue | 6.58e-07 | 371 |