FFCP PHASE1:Hg19::chr19:1064912..1064931,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1064912..1064931,+ | |||
|description=CAGE_peak_at_chr19:1064912..1064931,+ | |description=CAGE_peak_at_chr19:1064912..1064931,+ | ||
|id=chr19:1064912..1064931,+ | |id=chr19:1064912..1064931,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.86e-11!254;CL:0000039!2.97e-10!7;CL:0000586!2.97e-10!7;CL:0002322!3.76e-09!5 | |ontology_enrichment_celltype=CL:0000066!6.86e-11!254;CL:0000039!2.97e-10!7;CL:0000586!2.97e-10!7;CL:0002322!3.76e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;7.62e-13;3!CL:0000313;6.61e-10;1!CL:0002563;8.82e-10;4!CL:0000453;8.91e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.41e-13,3;CL:0000313,4.06e-10,1;CL:0002563,9.02e-10,4;CL:0000453,1.25e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!6.91e-26!106;DOID:0050687!3.21e-21!143;DOID:162!5.75e-12!235;DOID:14566!2.03e-11!239 | |||
|ontology_enrichment_disease_v019=DOID:1799;6.61e-10;1!DOID:10165;6.61e-10;1!DOID:178;6.61e-10;1!DOID:326;6.61e-10;1!DOID:3978;6.61e-10;1!DOID:3394;6.61e-10;1!DOID:2152;6.61e-10;1!DOID:5844;6.61e-10;1!DOID:1798;6.61e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.06e-10,1;DOID:1799,4.44e-10,1;DOID:10165,4.44e-10,1;DOID:1798,4.44e-10,1;DOID:178,6.33e-10,1;DOID:326,6.33e-10,1;DOID:3978,6.33e-10,1;DOID:3394,6.33e-10,1;DOID:5844,6.33e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000077!8.66e-10!130;UBERON:0004921!2.94e-08!129;UBERON:0004185!2.94e-08!129;UBERON:0008947!3.78e-08!38;UBERON:0003258!3.78e-08!38;UBERON:0001007!6.71e-08!155;UBERON:0001555!6.71e-08!155;UBERON:0007026!6.71e-08!155;UBERON:0001737!2.45e-07!9;UBERON:0001041!2.58e-07!98;UBERON:0004119!4.03e-07!169;UBERON:0000925!4.03e-07!169;UBERON:0006595!4.03e-07!169;UBERON:0005911!8.14e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.62e-13;3!UBERON:0000920;7.62e-13;3!UBERON:0004911;6.61e-10;1!UBERON:0002171;6.61e-10;1!UBERON:0004913;6.61e-10;1!UBERON:0003703;6.61e-10;1!UBERON:0006518;6.61e-10;1!UBERON:0008949;6.61e-10;1!UBERON:0000101;6.61e-10;1!UBERON:0002167;6.61e-10;1!UBERON:0001174;6.61e-10;1!UBERON:0004914;6.61e-10;1!UBERON:0001052;8.82e-10;4!UBERON:0001242;8.82e-10;4!UBERON:0001262;8.82e-10;4!UBERON:0004786;8.82e-10;4!UBERON:0004808;8.82e-10;4!UBERON:0001277;8.82e-10;4!UBERON:0004907;5.40e-08;5!UBERON:0000160;6.30e-08;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.41e-13,3;UBERON:0004911,4.06e-10,1;UBERON:0002171,5.30e-10,1;UBERON:0006518,5.30e-10,1;UBERON:0008949,5.30e-10,1;UBERON:0000101,5.30e-10,1;UBERON:0002167,5.30e-10,1;UBERON:0004913,8.99e-10,1;UBERON:0003703,8.99e-10,1;UBERON:0001174,8.99e-10,1;UBERON:0004914,8.99e-10,1;UBERON:0001242,9.02e-10,4;UBERON:0001262,9.02e-10,4;UBERON:0004786,9.02e-10,4;UBERON:0004808,9.02e-10,4;UBERON:0001277,9.02e-10,4;UBERON:0001052,1.17e-09,4;UBERON:0004907,6.77e-08,5;UBERON:0000160,7.65e-08,17;UBERON:0005911,2.07e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,8.37361401566913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.580969714347592,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.842923450390509,0,0,0.435758888184812,0.474541238222193,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0,0,0.95497793895076,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,3.30529745380596,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0.69169171316418,1.97466817701499,1.3037684630641,3.50901275705111,0,2.13213910407454,0,0,0,0,0,0,0,0,0,0.652931232636591,6.2195351430934,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0.664653872707185,0,0,0,0.284609546029793,0,1.73559738335131,0,0.435296032902013,0,0,0.0967563312890851,0.511625219603299,0.410577285266046,0,0,0,0,0,0,3.32437350649165,0.320635281006135,0,0.39961921916426,0.144090417154106,0,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0,0,0,0,5.82479747637269,0.787831823072237,0.412079291905832,0.26961417541674,0,0,0,0,1.60753148465019,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,2.88326013932776,0.314408610199332,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.643324774124777,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0.771656153083659,0,0,0,0,0,1.16916185303633,0.398594520940089,1.14495775979091,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0.11796972334774,0.550285795565037,0.231051332300676,0,0,0,0,0,0,1.83334686136996,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.79832133146375,0,0,0,0,0.354581522651905,0.111231401892069,0,0,1.12108865325516,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90154234056247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.551369397209069,0.50141507858475,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,8.37361401566913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.580969714347592,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.842923450390509,0,0,0.435758888184812,0.474541238222193,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,1.35287282397425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0,0,0,0,0.95497793895076,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,3.30529745380596,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0.69169171316418,1.97466817701499,1.3037684630641,3.50901275705111,0,2.13213910407454,0,0,0,0,0,0,0,0,0,0.652931232636591,6.2195351430934,0,0,0,0,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0.664653872707185,0,0,0,0.284609546029793,0,1.73559738335131,0,0.435296032902013,0,0,0.0967563312890851,0.511625219603299,0.410577285266046,0,0,0,0,0,0,3.32437350649165,0.320635281006135,0,0.39961921916426,0.144090417154106,0,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0,0,0,0,5.82479747637269,0.787831823072237,0.412079291905832,0.26961417541674,0,0,0,0,1.60753148465019,0.550157746388935,0.415440338029185,0,0,0,0,0,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,2.88326013932776,0.314408610199332,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.643324774124777,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0.771656153083659,0,0,0,0,0,1.16916185303633,0.398594520940089,1.14495775979091,0,0,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0.11796972334774,0.550285795565037,0.231051332300676,0,0,0,0,0,0,1.83334686136996,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0,0.79832133146375,0,0,0,0,0.354581522651905,0.111231401892069,0,0,1.12108865325516,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90154234056247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.551369397209069,0.50141507858475,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:1064912..1064931,+ | |short_description=p@chr19:1064912..1064931,+ | ||
}} | }} |
Latest revision as of 03:07, 26 July 2015
Short description: | p@chr19:1064912..1064931, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1064912..1064931, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.41e-13 | 3 |
serous secreting cell | 4.06e-10 | 1 |
intestinal epithelial cell | 9.02e-10 | 4 |
Langerhans cell | 1.25e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.41e-13 | 3 |
epithelium of female gonad | 4.06e-10 | 1 |
lower lobe of right lung | 5.30e-10 | 1 |
right lung lobe | 5.30e-10 | 1 |
lower lobe of lung | 5.30e-10 | 1 |
lobe of lung | 5.30e-10 | 1 |
right lung | 5.30e-10 | 1 |
hepatopancreatic ampulla | 8.99e-10 | 1 |
extrahepatic bile duct | 8.99e-10 | 1 |
common bile duct | 8.99e-10 | 1 |
duodenal papilla | 8.99e-10 | 1 |
intestinal mucosa | 9.02e-10 | 4 |
wall of intestine | 9.02e-10 | 4 |
gastrointestinal system mucosa | 9.02e-10 | 4 |
gastrointestinal system epithelium | 9.02e-10 | 4 |
intestinal epithelium | 9.02e-10 | 4 |
rectum | 1.17e-09 | 4 |
lower digestive tract | 6.77e-08 | 5 |
intestine | 7.65e-08 | 17 |
endo-epithelium | 2.07e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.06e-10 | 1 |
islet cell tumor | 4.44e-10 | 1 |
endocrine pancreas cancer | 4.44e-10 | 1 |
pancreatic endocrine carcinoma | 4.44e-10 | 1 |
vascular disease | 6.33e-10 | 1 |
ischemia | 6.33e-10 | 1 |
extrinsic cardiomyopathy | 6.33e-10 | 1 |
myocardial ischemia | 6.33e-10 | 1 |
myocardial infarction | 6.33e-10 | 1 |