FFCP PHASE1:Hg19::chr19:18366182..18366210,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=729966,5143 | |EntrezGene=729966,5143 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8782 | |HGNC=8782 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_NR_036575,uc002nil.3_5end | |association_with_transcript=18bp_to_NR_036575,uc002nil.3_5end | ||
|cluster_id=chr19:18366182..18366210,- | |||
|coexpression_cluster_id=C3544 | |||
|description=CAGE_peak_3_at_PDE4C_5end | |description=CAGE_peak_3_at_PDE4C_5end | ||
|id=chr19:18366182..18366210,- | |id=chr19:18366182..18366210,- | ||
|ontology_enrichment_celltype=CL:0002076!1.62e-09!43;CL:0000223!5.71e-08!59 | |ontology_enrichment_celltype=CL:0002076!1.62e-09!43;CL:0000223!5.71e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002537;3.55e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.76e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.83e-09;1!UBERON:0001045;3.67e-09;1 | |||
|ontology_enrichment_disease=DOID:299!3.87e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;4.09e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,4.12e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.10e-16!169;UBERON:0000925!1.10e-16!169;UBERON:0006595!1.10e-16!169;UBERON:0001007!4.01e-14!155;UBERON:0001555!4.01e-14!155;UBERON:0007026!4.01e-14!155;UBERON:0004921!1.58e-13!129;UBERON:0004185!1.58e-13!129;UBERON:0005409!6.62e-11!35;UBERON:0000077!1.62e-09!130;UBERON:0000160!5.52e-09!27;UBERON:0000464!1.46e-08!104;UBERON:0001004!8.27e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.54e-33;22!UBERON:0000160;1.35e-27;17!UBERON:0004921;7.04e-20;33!UBERON:0000059;1.86e-18;11!UBERON:0002108;7.32e-15;4!UBERON:0001155;1.06e-14;9!UBERON:0001154;3.67e-09;1!UBERON:0001153;3.67e-09;1!UBERON:0009854;3.67e-09;1!UBERON:0001555;4.41e-08;54!UBERON:0000945;1.58e-07;5!UBERON:0010039;1.58e-07;5!UBERON:0004907;2.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.05e-29,25;UBERON:0000160,1.70e-27,17;UBERON:0000059,2.08e-18,11;UBERON:0002108,8.66e-15,4;UBERON:0001155,1.16e-14,9;UBERON:0004921,3.94e-09,118;UBERON:0001154,4.87e-09,1;UBERON:0001153,4.87e-09,1;UBERON:0001045,4.87e-09,1;UBERON:0001007,2.69e-08,145;UBERON:0001555,2.69e-08,145;UBERON:0007026,2.69e-08,145;UBERON:0004907,2.51e-07,5;UBERON:0004119,2.73e-07,160;UBERON:0000925,2.73e-07,160;UBERON:0006595,2.73e-07,160 | |||
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| ||
|short_description=p3@PDE4C | |short_description=p3@PDE4C | ||
}} | }} |
Latest revision as of 14:51, 16 September 2015
Short description: | p3@PDE4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PDE4C_5end |
Coexpression cluster: | C3544_colon_signet_gastric_gall_stomach_adenocarcinoma_bile |
Association with transcript: | 18bp_to_NR_036575, uc002nil.3_5end |
EntrezGene: | 729966,5143 |
HGNC: | 8782 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.76e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.05e-29 | 25 |
intestine | 1.70e-27 | 17 |
large intestine | 2.08e-18 | 11 |
small intestine | 8.66e-15 | 4 |
colon | 1.16e-14 | 9 |
subdivision of digestive tract | 3.94e-09 | 118 |
vermiform appendix | 4.87e-09 | 1 |
caecum | 4.87e-09 | 1 |
midgut | 4.87e-09 | 1 |
digestive system | 2.69e-08 | 145 |
digestive tract | 2.69e-08 | 145 |
primitive gut | 2.69e-08 | 145 |
lower digestive tract | 2.51e-07 | 5 |
endoderm-derived structure | 2.73e-07 | 160 |
endoderm | 2.73e-07 | 160 |
presumptive endoderm | 2.73e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 4.12e-08 | 25 |