FFCP PHASE1:Hg19::chr19:32202543..32202547,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:32202543..32202547,+ | |||
|description=CAGE_peak_at_chr19:32202543..32202547,+ | |description=CAGE_peak_at_chr19:32202543..32202547,+ | ||
|id=chr19:32202543..32202547,+ | |id=chr19:32202543..32202547,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.06e-10,108;CL:0000049,1.06e-10,108;CL:0000860,2.04e-07,42;CL:0002057,2.04e-07,42;CL:0002032,3.81e-07,161;CL:0000837,3.81e-07,161;CL:0000988,7.68e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.26e-11!239;DOID:162!5.98e-11!235 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.11e-08;31!DOID:1240;4.28e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,8.03e-10,39;DOID:8692,6.50e-09,31;DOID:2531,1.90e-07,51;DOID:0060083,1.90e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.23e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.22e-17;9!UBERON:0001557;8.22e-17;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.45e-17,9;UBERON:0001557,5.62e-07,19 | |||
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| ||
|short_description=p@chr19:32202543..32202547,+ | |short_description=p@chr19:32202543..32202547,+ | ||
}} | }} |
Latest revision as of 06:12, 26 July 2015
Short description: | p@chr19:32202543..32202547, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:32202543..32202547, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.06e-10 | 108 |
common myeloid progenitor | 1.06e-10 | 108 |
classical monocyte | 2.04e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.04e-07 | 42 |
hematopoietic oligopotent progenitor cell | 3.81e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.81e-07 | 161 |
hematopoietic cell | 7.68e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.45e-17 | 9 |
upper respiratory tract | 5.62e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
leukemia | 8.03e-10 | 39 |
myeloid leukemia | 6.50e-09 | 31 |
hematologic cancer | 1.90e-07 | 51 |
immune system cancer | 1.90e-07 | 51 |