FFCP PHASE1:Hg19::chr13:92001646..92001654,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:92001646..92001654,+ | |||
|description=CAGE_peak_at_chr13:92001646..92001654,+ | |description=CAGE_peak_at_chr13:92001646..92001654,+ | ||
|id=chr13:92001646..92001654,+ | |id=chr13:92001646..92001654,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.53e-12!172;CL:0000566!3.53e-12!172;CL:0000988!4.56e-12!182;CL:0002032!8.98e-12!165;CL:0000837!8.98e-12!165;CL:0000542!1.22e-07!53;CL:0000051!1.22e-07!53;CL:0000945!1.26e-07!24;CL:0000826!1.26e-07!24;CL:0000838!4.28e-07!52 | |ontology_enrichment_celltype=CL:0000037!3.53e-12!172;CL:0000566!3.53e-12!172;CL:0000988!4.56e-12!182;CL:0002032!8.98e-12!165;CL:0000837!8.98e-12!165;CL:0000542!1.22e-07!53;CL:0000051!1.22e-07!53;CL:0000945!1.26e-07!24;CL:0000826!1.26e-07!24;CL:0000838!4.28e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0000540;4.45e-07;6!CL:0000404;4.45e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,3.33e-10,161;CL:0000837,3.33e-10,161;CL:0000037,1.12e-09,168;CL:0000988,4.66e-09,177;CL:0000763,2.21e-08,108;CL:0000049,2.21e-08,108;CL:0000540,4.95e-07,6;CL:0000031,4.95e-07,6;CL:0000404,4.95e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;4.45e-07;6 | |||
|ontology_enrichment_disease=DOID:2531!3.99e-18!51;DOID:0060083!3.99e-18!51;DOID:1240!1.79e-16!39;DOID:8692!4.51e-15!31;DOID:162!2.84e-14!235;DOID:14566!6.83e-14!239;DOID:0050686!9.73e-09!137 | |ontology_enrichment_disease=DOID:2531!3.99e-18!51;DOID:0060083!3.99e-18!51;DOID:1240!1.79e-16!39;DOID:8692!4.51e-15!31;DOID:162!2.84e-14!235;DOID:14566!6.83e-14!239;DOID:0050686!9.73e-09!137 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.17e-13;39!DOID:8692;1.81e-13;31!DOID:12603;6.72e-11;1!DOID:1799;2.17e-10;1!DOID:10165;2.17e-10;1!DOID:1798;2.17e-10;1!DOID:2531;7.88e-10;51!DOID:0060083;7.88e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.09e-14,39;DOID:8692,6.47e-14,31;DOID:2531,1.73e-13,51;DOID:0060083,1.73e-13,51;DOID:12603,6.73e-11,1;DOID:1799,4.33e-10,1;DOID:10165,4.33e-10,1;DOID:1798,4.33e-10,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0.61560529038394,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0,0.164201178899891,0.157421562627358,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0.739508020333575,0.46480320348181,0.710846162437108,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0.344745680736619,1.29096936716765,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0.612167784741805,0.641858054152187,0,0,0,0,0,0,1.24564449799115,0.502497330513487,1.0429658368404,0.65156653411535,0.605399502633369,0,0,0,0,0.209658645508376,0,0.150176892841506,0.16072558669708,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,1.28019066769952,0.400395987036012,0,0,0.954053754535364,0,0,0.382273228125229,0,0,1.31692042387539,0,0.393010762749165,0.411202997999018,0,0,0.473447805734733,0,0,0.294605907474837,0,0.270803863765016,0,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0.535081656179426,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0.756278537312543,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0.404132016209064,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0.538168907066586,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0,0,0.504867548488229,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.348581828608555,0.310983165046111,0.252320850875628,0.72995471815166,0,0,0,0.928735856063958,0,0.118306800039844,0,0.241011029883482,0.661763836394364,0.217879444092406,0.474541238222193,0.134831308160164,0.392442930250692,0,0.738155454624648,0,0,0,0,0,0,0.882926198829301,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.425325291727159,0.179117045405697,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0.224170287987055,0,0.646882724578552,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0,0,0,0.206768026122887,0,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0.364182336013434,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0,0,0.522870902049801,0.256450125116389,0,0,0.309123034943167,0.0915694648183434,0.247528499761764,0,0,0,0,0.616194468458578,0.921022048356777,0.551346289938122,0,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0.511795582622668,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0.281695602532241,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0.962479855263359,0,5.01668572839441,0.28853842595289,0.355709216742071,0,1.59663497146253,0.383010740264733,1.90506224451495,0.649243880549111,1.40398589056729,0.684704037099577,1.41011906195721,2.50634477090067,0.169291777801603,1.605880751037,0.80719882876419,0.851692475380653,0.687010689511529,0.307240764308458,0.223676107892416,0.166849141711909,0.390776190804081,0.556812347790485,0,0.540911356951966,0.66614393599564,0,0,0,0.242721043499027,0.334330152832435,0.284136146806413,0,0,0.614321404198464,0,0,0.222617410045812,1.97764649072111,0.211125408127993,0,0,0.251932747854276,0,0.246169610922139,0,0.269605053441981,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0.689486746482929,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0,0.183195186803725,0.533034776018635,0,0.941881538370149,0.166211681900156,0.451191321234361,0.19606253431774,0.503464760927528,2.27704479269022,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0.296521128680622,0.494255755786011,0.313265848516366,0,0,0,0.729819156862664,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0,0.901940516486955,0.72581733978073,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0.391102765469606,0,0,0,0.144090417154106,0.114536596165916,0.857974989309823,0.432164393964449,0,0,0,0,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0.202210631562555,0.0984274815147488,0.338693328263138,0,0,0.803765742325096,1.2378549293751,2.9080823662043,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.339936274560377,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0.454947352624943,0.285465333544967,0,0.468334905806882,0.144921028610825,0,0.233713309847224,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0.343395705182793,0,0,0,0.214441591374926,0.260994291965212,0.226705925512272,0.231522474323834,0.734210113519403,0,0,0,0.353378291891762,0.192914038270915,0.168942440653073,0.512483037175893,0,0,0.138258436151731,0,0,0,0.655219697692825,0.245772908753719,0,0,0.426766918776564,0.172214979660816,0,0.184105950251841,0,0,0.255788742607303,0.215649622793364,1.10086159299127,0.873677105536111,0,0.637724760305049,0.247871528518004,0,0,0.315446980005013,0.80057074828547,0,0,0,0,0,0.205116364240755,0.504143392443436,0,0,0,0,0.353909170043221,0,0.115525666150338,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0.351742488719241,0.255524855279191,0,0,0,0,0.0887023701626388,0.345701962667338,0,0,0,0,0,0,0,0.280272163313789,0,0,0.47775168788705,0,0.790068058663633,0.23248285073625,0.347716544605159,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.68732060563215,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0.22589216407792,0.439762066981716,0.150962843566674,0,0.218559560503957,0.470317296361523,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0.535661815816973,0,0.160482733378337,0,0,0,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0.380095503034311,0.101988829741982,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0.124149428591716,0,0,0.404234377916439,0,0,0.0673520530145875,0,0,0.0814032686109745,0.320182037633146,0,0.179650404213174,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,1.39560233594486,0,0,0,0,0,0,0,0,0.61560529038394,0,0,0.286235987131057,0.410623275218653,0.125542639594803,0,0.164201178899891,0.157421562627358,0,0,0.154816123316076,0.919421224478927,0.30120591877825,0.739508020333575,0.46480320348181,0.710846162437108,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0.344745680736619,1.29096936716765,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,0.612167784741805,0.641858054152187,0,0,0,0,0,0,1.24564449799115,0.502497330513487,1.0429658368404,0.65156653411535,0.605399502633369,0,0,0,0,0.209658645508376,0,0.150176892841506,0.16072558669708,0,0,0,1.75996244461323,0.546138611262131,0.889509253863555,1.28019066769952,0.400395987036012,0,0,0.954053754535364,0,0,0.382273228125229,0,0,1.31692042387539,0,0.393010762749165,0.411202997999018,0,0,0.473447805734733,0,0,0.294605907474837,0,0.270803863765016,0,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0.535081656179426,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0.12786256184353,0,0,0,0,0,0.756278537312543,0.443458794925128,0.263504357079378,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0.404132016209064,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0.538168907066586,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0,0,0.504867548488229,0.0920498986422993,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.348581828608555,0.310983165046111,0.252320850875628,0.72995471815166,0,0,0,0.928735856063958,0,0.118306800039844,0,0.241011029883482,0.661763836394364,0.217879444092406,0.474541238222193,0.134831308160164,0.392442930250692,0,0.738155454624648,0,0,0,0,0,0,0.882926198829301,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.425325291727159,0.179117045405697,0.290633938513962,0,0,0,0,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0.224170287987055,0,0.646882724578552,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.368738337083406,0,0,0,0.206768026122887,0,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0.0920809889358963,0,0.364182336013434,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0,0,0.522870902049801,0.256450125116389,0,0,0.309123034943167,0.0915694648183434,0.247528499761764,0,0,0,0,0.616194468458578,0.921022048356777,0.551346289938122,0,0.145016693914229,0.170453254832202,0.0890320356467374,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0.511795582622668,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,1.05650146756755,0,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0.281695602532241,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0.962479855263359,0,5.01668572839441,0.28853842595289,0.355709216742071,0,1.59663497146253,0.383010740264733,1.90506224451495,0.649243880549111,1.40398589056729,0.684704037099577,1.41011906195721,2.50634477090067,0.169291777801603,1.605880751037,0.80719882876419,0.851692475380653,0.687010689511529,0.307240764308458,0.223676107892416,0.166849141711909,0.390776190804081,0.556812347790485,0,0.540911356951966,0.66614393599564,0,0,0,0.242721043499027,0.334330152832435,0.284136146806413,0,0,0.614321404198464,0,0,0.222617410045812,1.97764649072111,0.211125408127993,0,0,0.251932747854276,0,0.246169610922139,0,0.269605053441981,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0.689486746482929,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0.108647371922008,0,0.183195186803725,0.533034776018635,0,0.941881538370149,0.166211681900156,0.451191321234361,0.19606253431774,0.503464760927528,2.27704479269022,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0.296521128680622,0.494255755786011,0.313265848516366,0,0,0,0.729819156862664,0.19566461893209,0,0.394584402849391,0,0.30607276163049,0,0.901940516486955,0.72581733978073,0,0,0,0,0.284609546029793,0,0,0.0979923974143777,0.0870592065804026,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0,0,0,0,0.391102765469606,0,0,0,0.144090417154106,0.114536596165916,0.857974989309823,0.432164393964449,0,0,0,0,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0,0,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0.202210631562555,0.0984274815147488,0.338693328263138,0,0,0.803765742325096,1.2378549293751,2.9080823662043,0.2249738915515,0.77380195455795,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.339936274560377,0,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0,0,0.276697269872462,0,0.454947352624943,0.285465333544967,0,0.468334905806882,0.144921028610825,0,0.233713309847224,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0.343395705182793,0,0,0,0.214441591374926,0.260994291965212,0.226705925512272,0.231522474323834,0.734210113519403,0,0,0,0.353378291891762,0.192914038270915,0.168942440653073,0.512483037175893,0,0,0.138258436151731,0,0,0,0.655219697692825,0.245772908753719,0,0,0.426766918776564,0.172214979660816,0,0.184105950251841,0,0,0.255788742607303,0.215649622793364,1.10086159299127,0.873677105536111,0,0.637724760305049,0.247871528518004,0,0,0.315446980005013,0.80057074828547,0,0,0,0,0,0.205116364240755,0.504143392443436,0,0,0,0,0.353909170043221,0,0.115525666150338,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0.351742488719241,0.255524855279191,0,0,0,0,0.0887023701626388,0.345701962667338,0,0,0,0,0,0,0,0.280272163313789,0,0,0.47775168788705,0,0.790068058663633,0.23248285073625,0.347716544605159,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0.68732060563215,0,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0.22589216407792,0.439762066981716,0.150962843566674,0,0.218559560503957,0.470317296361523,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0.535661815816973,0,0.160482733378337,0,0,0,0,0,0.436350690340377,0,0,0,0,0.126166424835079,0.109265571963696,0.380095503034311,0.101988829741982,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0.23806443146374,0,0.124149428591716,0,0,0.404234377916439,0,0,0.0673520530145875,0,0,0.0814032686109745,0.320182037633146,0,0.179650404213174,0,0,0,0,0,0.641136984606466 | ||
|short_description=p@chr13:92001646..92001654,+ | |short_description=p@chr13:92001646..92001654,+ | ||
}} | }} |
Latest revision as of 17:26, 24 July 2015
Short description: | p@chr13:92001646..92001654, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:92001646..92001654, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 3.33e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.33e-10 | 161 |
hematopoietic stem cell | 1.12e-09 | 168 |
hematopoietic cell | 4.66e-09 | 177 |
myeloid cell | 2.21e-08 | 108 |
common myeloid progenitor | 2.21e-08 | 108 |
neuron | 4.95e-07 | 6 |
neuroblast | 4.95e-07 | 6 |
electrically signaling cell | 4.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.09e-14 | 39 |
myeloid leukemia | 6.47e-14 | 31 |
hematologic cancer | 1.73e-13 | 51 |
immune system cancer | 1.73e-13 | 51 |
acute leukemia | 6.73e-11 | 1 |
islet cell tumor | 4.33e-10 | 1 |
endocrine pancreas cancer | 4.33e-10 | 1 |
pancreatic endocrine carcinoma | 4.33e-10 | 1 |