FFCP PHASE1:Hg19::chr19:39574692..39574701,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:39574692..39574701,- | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr19:39574692..39574701,- | |description=CAGE_peak_at_chr19:39574692..39574701,- | ||
|id=chr19:39574692..39574701,- | |id=chr19:39574692..39574701,- | ||
|ontology_enrichment_celltype=CL:0002076!6.13e-16!43;CL:0000223!5.67e-11!59;CL:0002368!1.58e-10!13;CL:0000066!5.02e-09!254;CL:0002231!2.37e-08!3;CL:0000076!6.04e-07!62 | |ontology_enrichment_celltype=CL:0002076!6.13e-16!43;CL:0000223!5.67e-11!59;CL:0002368!1.58e-10!13;CL:0000066!5.02e-09!254;CL:0002231!2.37e-08!3;CL:0000076!6.04e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0000307;1.71e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,2.09e-14,3;CL:0000069,2.09e-14,3;CL:0000307,2.09e-14,3;CL:0000377,2.09e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.75e-53;3!CL:0000377;1.71e-14;3 | |||
|ontology_enrichment_disease=DOID:1749!7.80e-24!14;DOID:305!1.96e-08!106;DOID:3111!3.95e-07!1;DOID:3603!3.95e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4556;1.71e-14;3!DOID:1749;2.18e-12;14!DOID:3908;3.10e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.83e-14,3;DOID:1749,2.24e-12,14;DOID:3908,3.22e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003343!1.70e-12!4;UBERON:0004785!1.70e-12!4;UBERON:0000344!5.69e-11!12;UBERON:0003729!4.25e-10!5;UBERON:0001004!1.50e-08!72;UBERON:0005153!1.90e-08!37;UBERON:0004733!1.35e-07!12;UBERON:0002028!1.35e-07!12;UBERON:0007277!1.35e-07!12;UBERON:0002294!1.76e-07!7;UBERON:0001173!1.76e-07!7;UBERON:0004912!1.76e-07!7;UBERON:0004913!4.97e-07!1;UBERON:0003703!4.97e-07!1;UBERON:0001174!4.97e-07!1;UBERON:0004914!4.97e-07!1;UBERON:0004732!5.13e-07!13;UBERON:0000065!6.31e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.11e-27;6!UBERON:0002680;1.48e-18;9!UBERON:0001895;1.48e-18;9!UBERON:0004733;3.36e-14;12!UBERON:0002028;3.36e-14;12!UBERON:0004732;3.43e-13;13!UBERON:0003126;5.86e-07;7!UBERON:0001005;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.38e-27,6;UBERON:0006215,2.38e-27,6;UBERON:0002680,1.24e-18,9;UBERON:0001895,1.24e-18,9;UBERON:0010092,1.24e-18,9;UBERON:0004733,2.94e-14,12;UBERON:0002028,2.94e-14,12;UBERON:0007277,2.94e-14,12;UBERON:0004732,3.03e-13,13;UBERON:0003076,1.27e-11,15;UBERON:0003057,1.27e-11,15;UBERON:0003126,6.39e-07,7;UBERON:0001005,6.39e-07,7 | |||
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|short_description=p@chr19:39574692..39574701,- | |short_description=p@chr19:39574692..39574701,- | ||
}} | }} |
Latest revision as of 07:27, 26 July 2015
Short description: | p@chr19:39574692..39574701, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39574692..39574701, - |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 2.09e-14 | 3 |
branched duct epithelial cell | 2.09e-14 | 3 |
tracheal epithelial cell | 2.09e-14 | 3 |
tracheoblast | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.38e-27 | 6 |
rhombic lip | 2.38e-27 | 6 |
regional part of metencephalon | 1.24e-18 | 9 |
metencephalon | 1.24e-18 | 9 |
future metencephalon | 1.24e-18 | 9 |
segmental subdivision of hindbrain | 2.94e-14 | 12 |
hindbrain | 2.94e-14 | 12 |
presumptive hindbrain | 2.94e-14 | 12 |
segmental subdivision of nervous system | 3.03e-13 | 13 |
posterior neural tube | 1.27e-11 | 15 |
chordal neural plate | 1.27e-11 | 15 |
trachea | 6.39e-07 | 7 |
respiratory airway | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.83e-14 | 3 |
squamous cell carcinoma | 2.24e-12 | 14 |
non-small cell lung carcinoma | 3.22e-09 | 5 |