FFCP PHASE1:Hg19::chr19:829566..829598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:829566..829598,+ | |||
|coexpression_cluster_id=C973 | |||
|description=CAGE_peak_at_chr19:829566..829598,+ | |description=CAGE_peak_at_chr19:829566..829598,+ | ||
|id=chr19:829566..829598,+ | |id=chr19:829566..829598,+ | ||
|ontology_enrichment_celltype=CL:0000763!6.62e-25!112;CL:0000049!6.62e-25!112;CL:0000037!3.53e-20!172;CL:0000566!3.53e-20!172;CL:0000988!1.01e-18!182;CL:0002032!1.53e-16!165;CL:0000837!1.53e-16!165;CL:0002619!2.01e-15!3;CL:0000557!3.70e-09!71;CL:0002194!6.39e-09!63;CL:0000576!6.39e-09!63;CL:0000040!6.39e-09!63;CL:0000559!6.39e-09!63;CL:0002009!1.40e-08!65;CL:0000766!2.17e-08!76;CL:0000839!8.18e-08!70;CL:0000842!2.59e-07!3;CL:0001024!9.81e-07!1 | |ontology_enrichment_celltype=CL:0000763!6.62e-25!112;CL:0000049!6.62e-25!112;CL:0000037!3.53e-20!172;CL:0000566!3.53e-20!172;CL:0000988!1.01e-18!182;CL:0002032!1.53e-16!165;CL:0000837!1.53e-16!165;CL:0002619!2.01e-15!3;CL:0000557!3.70e-09!71;CL:0002194!6.39e-09!63;CL:0000576!6.39e-09!63;CL:0000040!6.39e-09!63;CL:0000559!6.39e-09!63;CL:0002009!1.40e-08!65;CL:0000766!2.17e-08!76;CL:0000839!8.18e-08!70;CL:0000842!2.59e-07!3;CL:0001024!9.81e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000037;4.53e-12;1!CL:0001024;4.53e-12;1!CL:0002032;7.36e-12;1!CL:0000557;7.36e-12;1!CL:0000763;7.11e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.59e-22,108;CL:0000049,2.59e-22,108;CL:0000037,1.39e-15,168;CL:0000988,1.13e-14,177;CL:0002032,2.86e-14,161;CL:0000837,2.86e-14,161;CL:0001024,4.53e-12,1 | |||
|ontology_enrichment_development_v019=CL:0000049;6.18e-11;108 | |||
|ontology_enrichment_disease=DOID:8692!9.99e-35!31;DOID:1240!6.58e-27!39;DOID:2531!8.80e-20!51;DOID:0060083!8.80e-20!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.60e-61;31!DOID:1240;5.92e-40;39!DOID:2531;4.96e-23;51!DOID:0060083;4.96e-23;51!DOID:225;5.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.89e-64,31;DOID:1240,2.05e-50,39;DOID:2531,4.08e-38,51;DOID:0060083,4.08e-38,51;DOID:0050686,8.06e-13,137;DOID:225,5.62e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.63e-10!102;UBERON:0003061!2.63e-10!102;UBERON:0002371!2.71e-09!80;UBERON:0002193!4.47e-09!112;UBERON:0001474!1.86e-08!86;UBERON:0004765!8.40e-07!101;UBERON:0001434!8.40e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr19:829566..829598,+ | |short_description=p@chr19:829566..829598,+ | ||
}} | }} |
Latest revision as of 18:38, 27 July 2015
Short description: | p@chr19:829566..829598, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:829566..829598, + |
Coexpression cluster: | C973_acute_granulocyte_CD34_CD133_myelodysplastic_biphenotypic_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.59e-22 | 108 |
common myeloid progenitor | 2.59e-22 | 108 |
hematopoietic stem cell | 1.39e-15 | 168 |
hematopoietic cell | 1.13e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.86e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.86e-14 | 161 |
CD34-positive, CD38-negative hematopoietic stem cell | 4.53e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.89e-64 | 31 |
leukemia | 2.05e-50 | 39 |
hematologic cancer | 4.08e-38 | 51 |
immune system cancer | 4.08e-38 | 51 |
organ system cancer | 8.06e-13 | 137 |
syndrome | 5.62e-12 | 1 |