FFCP PHASE1:Hg19::chr1:103574001..103574014,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1301 | |EntrezGene=1301 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2186 | |HGNC=2186 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCU0 | |UniProt=E9PCU0 | ||
|association_with_transcript=20bp_to_ENST00000512756_5end | |association_with_transcript=20bp_to_ENST00000512756_5end | ||
|cluster_id=chr1:103574001..103574014,- | |||
|coexpression_cluster_id=C2510 | |||
|description=CAGE_peak_3_at_COL11A1_5end | |description=CAGE_peak_3_at_COL11A1_5end | ||
|id=chr1:103574001..103574014,- | |id=chr1:103574001..103574014,- | ||
|ontology_enrichment_celltype=CL:0000055!8.03e-21!180;CL:0000325!5.20e-10!39;CL:0000133!1.87e-08!59;CL:0000075!1.63e-07!27 | |ontology_enrichment_celltype=CL:0000055!8.03e-21!180;CL:0000325!5.20e-10!39;CL:0000133!1.87e-08!59;CL:0000075!1.63e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000062;9.90e-08;9!CL:0000128;5.05e-07;7!CL:0000126;5.05e-07;7!CL:0000127;5.05e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.03e-07,11;CL:0000375,1.03e-07,11;CL:0000335,1.03e-07,11;CL:0000133,3.37e-07,59;CL:0000128,5.31e-07,7;CL:0000126,5.31e-07,7;CL:0000127,5.31e-07,7;CL:0002453,5.31e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000335;1.04e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!8.71e-20!86;UBERON:0001017!6.43e-18!82;UBERON:0000073!1.20e-17!94;UBERON:0001016!1.20e-17!94;UBERON:0000475!2.69e-15!365;UBERON:0003075!1.09e-14!86;UBERON:0007284!1.09e-14!86;UBERON:0004121!5.70e-14!169;UBERON:0002346!6.44e-14!90;UBERON:0002616!6.89e-14!59;UBERON:0000924!1.47e-13!173;UBERON:0006601!1.47e-13!173;UBERON:0000033!1.81e-13!123;UBERON:0000955!4.49e-13!69;UBERON:0006238!4.49e-13!69;UBERON:0000153!5.20e-13!129;UBERON:0007811!5.20e-13!129;UBERON:0003056!2.46e-12!61;UBERON:0001049!8.18e-12!57;UBERON:0005068!8.18e-12!57;UBERON:0006241!8.18e-12!57;UBERON:0007135!8.18e-12!57;UBERON:0007625!2.25e-09!11;UBERON:0002020!4.24e-09!34;UBERON:0003528!4.24e-09!34;UBERON:0001893!5.39e-09!34;UBERON:0002791!1.05e-08!33;UBERON:0001869!1.53e-08!32;UBERON:0002780!1.58e-08!41;UBERON:0001890!1.58e-08!41;UBERON:0006240!1.58e-08!41;UBERON:0003080!4.24e-08!42;UBERON:0002200!1.06e-07!11;UBERON:0006876!1.06e-07!11;UBERON:0000956!1.68e-07!25;UBERON:0000203!1.68e-07!25;UBERON:0000914!9.04e-07!83;UBERON:0002329!9.04e-07!83;UBERON:0003077!9.04e-07!83;UBERON:0003059!9.04e-07!83;UBERON:0007282!9.04e-07!83;UBERON:0009618!9.04e-07!83;UBERON:0007285!9.04e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.46e-11;11!UBERON:0006876;2.06e-08;11!UBERON:0003688;7.56e-08;6!UBERON:0002358;7.56e-08;6!UBERON:0003684;7.56e-08;6!UBERON:0001178;7.56e-08;6!UBERON:0005284;4.20e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.45e-11,11;UBERON:0001017,5.04e-11,81;UBERON:0001016,9.24e-10,89;UBERON:0004121,7.09e-09,171;UBERON:0000924,7.09e-09,171;UBERON:0006601,7.09e-09,171;UBERON:0003075,1.70e-08,82;UBERON:0007284,1.70e-08,82;UBERON:0006876,2.07e-08,11;UBERON:0000955,3.23e-08,68;UBERON:0006238,3.23e-08,68;UBERON:0002346,3.37e-08,86;UBERON:0003688,7.48e-08,6;UBERON:0002358,7.48e-08,6;UBERON:0003684,7.48e-08,6;UBERON:0001178,7.48e-08,6;UBERON:0010371,8.23e-08,104;UBERON:0003056,8.70e-08,61;UBERON:0005284,4.22e-07,5 | |||
|phase1_expression=96.289541013395,141.734546815831,65.2618890964346,186.136334936823,45.5900316315834,11.3404008133048,32.9289841618804,5.68547886084148,0.261185628199839,0,0,0,0,9.0349437660834,17.2326635378516,0,0,0,0,3.20114750999649,5.91602004608334,5.01527554364941,24.0438229190088,17.6568008344021,33.6454274114071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,3.61439152384566,1.50401373190767,8.98048417557107,120.883463951767,293.440826792489,37.0576483283146,33.2594096193846,30.4786706355147,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.8364853915472,0,0,0.286836620748814,0,4.48542080113846,0,0.24666754841716,0.311211035399766,0,0,176.1800457787,122.14929598976,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.245668634623536,0.516628905878827,26.1360628602052,17.8032189080561,0,0,0.168336113954066,0.500474079487857,0.277064115484183,2.19488810440419,7.35570709917647,9.16452159330241,0,52.5611632568366,62.9994297014774,1.48352330811693,0,0,36.0696756063881,19.3561530584853,0.506328996723799,0.292311015483596,0.757301322732344,3.77404584433427,0,28.0457578088125,14.2060458500973,5.08681776931463,0,0,0,0.609868530647977,0.397589304964456,1.62671520017326,4.45742536566093,0.756962552626885,0,32.8544017892614,73.3294669539889,5.52539685409922,57.1172551479334,10.8281922250438,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,23.1616543903009,0,0,0,0,0.325808305310325,0,23.0930147240437,20.0559600606883,139.36412005792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,1.14596527667483,1.17217447210047,0,6.88944201112268,2.70308752059526,2.85826432630578,3.47606361470618,64.0861301184922,1.68678057388185,10.8588241236533,3.57656445851882,0,1.32969058292435,0,0.771622122786426,1.41849132023278,0,0.428933980974443,30.3868099019208,4.11620168390384,0,0.710783897485092,1.58390374586686,0,0,0,0,0,0,85.7856982659866,21.8237678084816,0,13.75422413342,4.72595541865882,7.16243852959582,0,0,0,0,28.4585979129159,14.3153839243384,3.09315525111078,2.51274398001523,0.637938751653163,0,0,0,45.3958519360818,14.004774589671,12.7494561138876,0.831883446123229,2.67643483195743,3.15404830067869,5.38850508966481,214.574569105864,115.977827068552,38.2850363782268,7.97070718242524,8.29661258437664,3.21469373531907,13.7060810223918,15.7845974952994,0,0,0,0,0,0.907170879989041,51.6064240263056,541.106917813708,100.195653712607,14.3515847166385,258.923868027752,45.1999518413537,4.45254199334973,0,0,0.328508624055237,0,0.116210378459959,0,0.200506470303285,0,0.459257792658427,0,3.54035920390445,0,0,0,0,0.633309773357254,0,0,0,0,0,0,0.254876273045038,0,0.895499018888713,0,0,7.1806035032589,22.9610251989794,13.991270970565,0,16.2077952728468,10.3136874900735,0,0,3.21367859688319,0.773365746336976,3.08097234229289,3.37708084397485,1.92971201478343,16.6501379545824,16.9669531879647,1.44885266607372,6.94449878044551,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,128.394637429085,73.0836471100257,57.7609487589189,1.27948895655667,19.6851934495603,0,0,5.57604618508276,0.823611089208164,1.53156123049392,0.202182481573316,0,0,0.48763373908959,0,0,1.36499911407986,2.96951407102797,0,0,0,0,2.89387767133344,4.59126326432643,4.8698490471049,4.3375289733965,0.845086807596724,2.15117028306077,10.2179002653646,9.27344733851251,5.67617702512956,0,0,0,0.699869440489966,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,313.421824688006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,230.463630802326,0,0,0.71623345421307,0,0,1.9882952955326,2.11004124615769,0,0,0,0.597743964753209,0.276283915531148,0,11.5563611227435,0,13.6857418571195,0,0,0,0.0986434056369336,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0.885741385813839,1.32656082487949,0,0.110579259931225,0.591095237907095,1.53569778007781,0,0,0.0769502585037971,32.2456018047013,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27149263184303,0,0,0,0,0,0,0,0,0,0,0.741412462787447,5.61804353109152,0.468528891450678,0,0,0,0,0,4.59109142445735,36.0163503882381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0730562982461,0,0,1.45614830698521,0,1.68333522528221,0.213452994739353,0,0,0,0,0,0,0,3.80531777006119,4.07951100618099,0,0,0,1.36905378891993,0,0,0,0,0,0,0.399358000997982,0,0,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,2.31545790389679,0.482259445395058,0.825236619583403,1.24632101408756,0,0,1.39723980313457,0,0,0.0524545881349981,0,0,0,0,0,0.5085370753095,0,0,0.326587360109409,9.578415324999,1.06720276974141,0.170388021785422,0,0,0,1.29282956361551,1.58679122091228,0,0,0,0.628817220398664,0,0,0,0,0,0.544017803369474,0,0.612691153526923,0,0,1.77213635993397,1.83039397352945,0.876336514945499,1.14681839138014,1.33114861844223,1.1177352529449,2.49027542885215,0,0,0,0,0,0,0,2.57084640831947,0,1.51522404220071,1.76097531226803,0,0.228840068396924,0,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| ||
|short_description=p3@COL11A1 | |short_description=p3@COL11A1 | ||
}} | }} |
Latest revision as of 06:32, 25 September 2015
Short description: | p3@COL11A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COL11A1_5end |
Coexpression cluster: | C2510_Preadipocyte_Chondrocyte_Osteoblast_Wilms_rhabdomyosarcoma_adrenal_Lens |
Association with transcript: | 20bp_to_ENST00000512756_5end |
EntrezGene: | COL11A1 |
HGNC: | 2186 |
UniProt: | E9PCU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.03e-07 | 11 |
osteoprogenitor cell | 1.03e-07 | 11 |
mesenchyme condensation cell | 1.03e-07 | 11 |
neurectodermal cell | 3.37e-07 | 59 |
oligodendrocyte | 5.31e-07 | 7 |
macroglial cell | 5.31e-07 | 7 |
astrocyte | 5.31e-07 | 7 |
oligodendrocyte precursor cell | 5.31e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 1.45e-11 | 11 |
central nervous system | 5.04e-11 | 81 |
nervous system | 9.24e-10 | 89 |
ectoderm-derived structure | 7.09e-09 | 171 |
ectoderm | 7.09e-09 | 171 |
presumptive ectoderm | 7.09e-09 | 171 |
neural plate | 1.70e-08 | 82 |
presumptive neural plate | 1.70e-08 | 82 |
vasculature of organ | 2.07e-08 | 11 |
brain | 3.23e-08 | 68 |
future brain | 3.23e-08 | 68 |
neurectoderm | 3.37e-08 | 86 |
omentum | 7.48e-08 | 6 |
peritoneum | 7.48e-08 | 6 |
abdominal cavity | 7.48e-08 | 6 |
visceral peritoneum | 7.48e-08 | 6 |
ecto-epithelium | 8.23e-08 | 104 |
pre-chordal neural plate | 8.70e-08 | 61 |
brain vasculature | 4.22e-07 | 5 |