FFCP PHASE1:Hg19::chr11:27216773..27216782,-: Difference between revisions
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|id=chr11:27216773..27216782,-
|short_description=p@chr11:27216773..27216782,-
|description=CAGE_peak_at_chr11:27216773..27216782,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:27216773..27216782,- | |||
|description=CAGE_peak_at_chr11:27216773..27216782,- | |||
|id=chr11:27216773..27216782,- | |||
|ontology_enrichment_celltype=CL:0000064!3.35e-30!3;CL:0005012!3.35e-30!3;CL:0000067!3.35e-30!3;CL:0002304!3.35e-30!3;CL:0000306!9.42e-11!4;CL:0002222!9.42e-11!4;CL:0002224!9.42e-11!4;CL:0000075!4.96e-09!27;CL:0000667!7.83e-08!6;CL:0000058!7.83e-08!6;CL:0000138!7.83e-08!6;CL:0002620!3.04e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000138;7.67e-18;6!CL:0000153;2.19e-12;9!CL:0000447;2.19e-12;9!CL:0000188;2.45e-12;9!CL:0000327;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.67e-18,6;CL:0000138,7.67e-18,6;CL:0000153,2.19e-12,9;CL:0000447,2.19e-12,9;CL:0000188,2.45e-12,9;CL:0000327,5.55e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!8.62e-12!1;DOID:4549!8.62e-12!1;DOID:5861!8.62e-12!1;DOID:6496!8.62e-12!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;9.37e-99;1!DOID:4549;9.37e-99;1!DOID:5861;9.37e-99;1!DOID:6496;9.37e-99;1!DOID:201;7.67e-18;6!DOID:0060100;7.67e-18;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.37e-99,1;DOID:4549,9.37e-99,1;DOID:5861,9.37e-99,1;DOID:6496,9.37e-99,1;DOID:201,7.67e-18,6;DOID:0060100,7.67e-18,6 | |||
|ontology_enrichment_uberon=UBERON:0007625!7.97e-32!11;UBERON:0001778!3.35e-30!3;UBERON:0001775!3.35e-30!3;UBERON:0000488!7.83e-23!4;UBERON:0000019!2.63e-18!19;UBERON:0000047!2.63e-18!19;UBERON:0004088!2.63e-18!19;UBERON:0003072!2.63e-18!19;UBERON:0003071!2.63e-18!19;UBERON:0004128!2.63e-18!19;UBERON:0001801!1.70e-17!14;UBERON:0000970!2.25e-17!20;UBERON:0002104!1.57e-16!21;UBERON:0001456!1.57e-16!21;UBERON:0002203!1.93e-15!6;UBERON:0001768!1.93e-15!6;UBERON:0000020!4.61e-15!23;UBERON:0001032!2.02e-14!24;UBERON:0004456!2.02e-14!24;UBERON:0005085!7.20e-12!29;UBERON:0002902!5.43e-11!1;UBERON:0009899!5.43e-11!1;UBERON:0002581!6.00e-11!1;UBERON:0010077!9.42e-11!4;UBERON:0005389!9.42e-11!4;UBERON:0000484!9.42e-11!4;UBERON:0002546!9.42e-11!4;UBERON:0000965!9.42e-11!4;UBERON:0001803!9.42e-11!4;UBERON:0003073!9.42e-11!4;UBERON:0005426!9.42e-11!4;UBERON:0003056!3.51e-09!61;UBERON:0002200!1.13e-08!11;UBERON:0006876!1.13e-08!11;UBERON:0001444!5.28e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;4.27e-34;3!UBERON:0004755;4.27e-34;3!UBERON:0001134;1.54e-07;16!UBERON:0002036;1.54e-07;16!UBERON:0001474;7.18e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,4.27e-34,3;UBERON:0004755,4.27e-34,3 | |||
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|short_description=p@chr11:27216773..27216782,- | |||
}} | }} |
Latest revision as of 21:17, 23 July 2015
Short description: | p@chr11:27216773..27216782, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:27216773..27216782, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.67e-18 | 6 |
chondrocyte | 7.67e-18 | 6 |
GAG secreting cell | 2.19e-12 | 9 |
carbohydrate secreting cell | 2.19e-12 | 9 |
cell of skeletal muscle | 2.45e-12 | 9 |
extracellular matrix secreting cell | 5.55e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 4.27e-34 | 3 |
skeletal tissue | 4.27e-34 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.37e-99 | 1 |
extraosseous chondrosarcoma | 9.37e-99 | 1 |
myxoid chondrosarcoma | 9.37e-99 | 1 |
extraskeletal myxoid chondrosarcoma | 9.37e-99 | 1 |
connective tissue cancer | 7.67e-18 | 6 |
musculoskeletal system cancer | 7.67e-18 | 6 |