FFCP PHASE1:Hg19::chr14:91730866..91730905,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:91730866..91730905,- | |||
|description=CAGE_peak_at_chr14:91730866..91730905,- | |description=CAGE_peak_at_chr14:91730866..91730905,- | ||
|id=chr14:91730866..91730905,- | |id=chr14:91730866..91730905,- | ||
|ontology_enrichment_celltype=CL:0002368!4.93e-07!13 | |ontology_enrichment_celltype=CL:0002368!4.93e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002368;7.53e-19;13!CL:0000244;6.90e-12;4!CL:0000731;6.90e-12;4!CL:0002076;1.25e-11;42!CL:0002202;1.86e-10;9!CL:0002632;1.86e-10;9!CL:0002166;3.28e-09;3!CL:0002328;3.46e-09;3!CL:0002621;4.06e-09;3!CL:0000307;1.20e-08;3!CL:0002159;3.10e-08;14!CL:0000135;1.26e-07;3!CL:0000388;1.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,6.54e-19,13;CL:0002076,3.24e-14,42;CL:0000244,6.77e-12,4;CL:0000731,6.77e-12,4;CL:0002202,2.06e-10,9;CL:0002632,2.06e-10,9;CL:0002166,3.26e-09,3;CL:0002328,3.43e-09,3;CL:0002621,4.02e-09,3;CL:0000223,4.70e-09,58;CL:0000068,1.43e-08,3;CL:0000069,1.43e-08,3;CL:0000307,1.43e-08,3;CL:0000377,1.43e-08,3;CL:0002159,2.21e-08,14;CL:0000135,1.00e-07,3;CL:0000388,1.00e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000377;1.20e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.54e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;1.07e-10;12!UBERON:0000365;1.76e-09;5!UBERON:0004815;3.46e-09;3!UBERON:0002031;3.46e-09;3!UBERON:0001949;4.06e-09;3!UBERON:0005910;7.14e-08;6!UBERON:0007196;7.22e-08;15!UBERON:0001558;7.22e-08;15!UBERON:0007846;1.26e-07;3!UBERON:0000043;1.26e-07;3!UBERON:0007845;1.26e-07;3!UBERON:0001708;5.70e-07;4!UBERON:0008895;5.70e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.73e-09,5;UBERON:0004815,3.43e-09,3;UBERON:0002031,3.43e-09,3;UBERON:0001949,4.02e-09,3;UBERON:0005910,7.05e-08,6;UBERON:0007196,8.44e-08,15;UBERON:0001558,8.44e-08,15;UBERON:0001004,8.85e-08,74;UBERON:0007846,1.00e-07,3;UBERON:0000043,1.00e-07,3;UBERON:0007845,1.00e-07,3;UBERON:0000915,2.50e-07,52;UBERON:0010188,2.69e-07,6;UBERON:0002539,2.69e-07,6;UBERON:0008816,2.69e-07,6;UBERON:0000065,4.61e-07,54;UBERON:0001708,5.67e-07,4;UBERON:0008895,5.67e-07,4;UBERON:0005178,7.18e-07,34;UBERON:0002224,7.18e-07,34 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.309632246632152,11.0330546937471,8.433765725791,4.06729411183466,0,0,0,0,0.200544447470142,0,0,0,0,1.01778767145695,0,1.21292030593908,0.697287110717054,0,0.929119112685311,0.863077176966451,1.7931249457037,0.236482229888585,0,0,0,0.752969358170419,0.818718450173537,0.224723484445085,0.918251677112708,0,0.639337125799041,2.63881040149373,2.79249120670285,2.98357325372886,0.580418477257168,0,1.24564449799115,1.7587406567972,0.521482918420201,0.65156653411535,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557052284425868,0,0,0,0.640456598628376,0.130059347559878,1.47994114143309,1.38175008892924,2.02862160014537,0,0,0,0.566546713487831,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0,2.1686349143074,0,0.144846518960824,2.3858578411533,3.40644409211845,0,0,0,0.851363990735132,1.82147644146271,3.33705998505986,0.324547393654683,0,0.132957960518865,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,7.41359888642308,0,0,0,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.448346041655403,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0.336672227908132,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0.309157587715317,0,0,0.337552664482532,0.194874010322397,0.504867548488229,0.0920498986422993,0,0.355009592516614,0.10075209822764,0,11.0158686303079,9.54611422067921,3.72845974005705,0,0,0,0,0,0,3.12899064659632,0,2.76269842704961,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0.370353780634118,0,0,0,0,0,0.144366447761074,0,0.190254152234598,3.95102198979638,1.71697232418975,0,0.234004265139238,0,5.62403003920662,9.23901705093727,10.3495820986942,0.0895585227028483,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0.65147236858747,0,0.791951872933429,0,0,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0.61642896765115,0.716243852959582,0,0,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,3.23840356985577,2.13074070375753,1.39616165223476,0,3.95115286763861,0,5.01266175758212,0.184161977871793,0.229628896329213,0,0.655622074797121,0,0,0,0,0.105551628892876,0,0.340187410553031,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.412164046590889,0,0,4.01985876597321,1.95018073810956,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0.178064071293475,3.96683796866347,4.03599141466723,8.93288987462089,1.6185244936888,0,1.25924938732256,1.3940745403212,0,0,1.73986598415015,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0.243713489631284,1.05650146756755,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,3.27155183266741,6.03272047982209,2.17781969722645,0.282431402330337,11.6236450621232,6.73885902670502,15.076625220247,10.3375530093132,0,0,0,0,0,0,1.08006287447623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.296964680832639,0,0,0.281338832821026,0,3.46088135876195,0,0.19924798825107,0.828851746593443,0,0,0,0,0.0898683511473268,0,0,0.197286811273867,0,0,0,0.185536196323703,3.99227596002388,2.3438498497671,0,0,0.682760689712998,0,0,0,0,0.520874984799877,0,0.120596438625408,1.52581736317083,0.995213339381022,1.47773809476774,0.438770794307945,0,0,0.615602068030377,0,0,0,0,0.31900115973192,0,0,0,0,0,2.03036094555463,1.56850027454192,1.00692952185506,1.70778359451767,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0.783939179315021,0,0.17472666824203,0,0,0,0,1.84279131327997,0,0,0,0,0.379864775735272,0.195551382734803,0.721429382263803,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0.77380195455795,0.364497339948148,0,0.551639951094387,0.367182116944987,0,0,0,1.42939065274673,0,0,0,0,0.326587360109409,0,0.082092520749339,0.340776043570843,0.906496732161005,0.146552233678082,0,0.258565912723101,0.39669780522807,0,0,1.06787412567695,0.157204305099666,2.89967338743037,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.248385611765534,0,0.37494122388632,0,0,0,0,0,0.447764408660622,0,0,0,0,0,0,0,1.08806040407946,1.33069634990671,0.159296767163702,0.449803112163605,0.155262956876259,0.414706207840855,0,0.521745061811734,0,0.380805212168795,0.406870733204662,0.181848659202559,0.322231671127465,0,0,0,0.686791410365586,0.673498977531838,0,0,0.428883182749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| ||
|short_description=p@chr14:91730866..91730905,- | |short_description=p@chr14:91730866..91730905,- | ||
}} | }} |
Latest revision as of 23:35, 24 July 2015
Short description: | p@chr14:91730866..91730905, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:91730866..91730905, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 6.54e-19 | 13 |
endo-epithelial cell | 3.24e-14 | 42 |
transitional epithelial cell | 6.77e-12 | 4 |
urothelial cell | 6.77e-12 | 4 |
epithelial cell of tracheobronchial tree | 2.06e-10 | 9 |
epithelial cell of lower respiratory tract | 2.06e-10 | 9 |
epithelial cell of Malassez | 3.26e-09 | 3 |
bronchial epithelial cell | 3.43e-09 | 3 |
gingival epithelial cell | 4.02e-09 | 3 |
endodermal cell | 4.70e-09 | 58 |
duct epithelial cell | 1.43e-08 | 3 |
branched duct epithelial cell | 1.43e-08 | 3 |
tracheal epithelial cell | 1.43e-08 | 3 |
tracheoblast | 1.43e-08 | 3 |
general ecto-epithelial cell | 2.21e-08 | 14 |
fibrocyte | 1.00e-07 | 3 |
tendon cell | 1.00e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.73e-09 | 5 |
lower respiratory tract epithelium | 3.43e-09 | 3 |
epithelium of bronchus | 3.43e-09 | 3 |
gingival epithelium | 4.02e-09 | 3 |
transitional epithelium | 7.05e-08 | 6 |
tracheobronchial tree | 8.44e-08 | 15 |
lower respiratory tract | 8.44e-08 | 15 |
respiratory system | 8.85e-08 | 74 |
dense regular connective tissue | 1.00e-07 | 3 |
tendon | 1.00e-07 | 3 |
regular connective tissue | 1.00e-07 | 3 |
thoracic segment of trunk | 2.50e-07 | 52 |
protuberance | 2.69e-07 | 6 |
pharyngeal arch | 2.69e-07 | 6 |
embryonic head | 2.69e-07 | 6 |
respiratory tract | 4.61e-07 | 54 |
jaw skeleton | 5.67e-07 | 4 |
splanchnocranium | 5.67e-07 | 4 |
thoracic cavity element | 7.18e-07 | 34 |
thoracic cavity | 7.18e-07 | 34 |