FFCP PHASE1:Hg19::chr1:156561906..156561927,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_AK123518_5end | |association_with_transcript=-5bp_to_AK123518_5end | ||
|cluster_id=chr1:156561906..156561927,+ | |||
|description=CAGE_peak_3_at_AK123518_5end | |description=CAGE_peak_3_at_AK123518_5end | ||
|id=chr1:156561906..156561927,+ | |id=chr1:156561906..156561927,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.87e-15!254;CL:0000077!1.13e-07!19 | |ontology_enrichment_celltype=CL:0000066!3.87e-15!254;CL:0000077!1.13e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.79e-11;19!CL:0002586;4.58e-09;3!CL:0000307;7.29e-09;3!CL:0002553;7.74e-08;1!CL:0002581;2.91e-07;1!CL:0000149;5.30e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.00e-11,19;CL:0002586,6.22e-09,3;CL:0000068,6.47e-09,3;CL:0000069,6.47e-09,3;CL:0000307,6.47e-09,3;CL:0000377,6.47e-09,3;CL:0002553,8.00e-08,1;CL:0002581,1.95e-07,1;CL:0000149,6.65e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;7.29e-09;3!UBERON:0005754;2.91e-07;1 | |||
|ontology_enrichment_disease=DOID:162!9.24e-10!235;DOID:14566!1.46e-09!239;DOID:0050687!3.15e-09!143;DOID:305!7.79e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!3.25e-08!46;UBERON:0008947!4.48e-08!38;UBERON:0003258!4.48e-08!38;UBERON:0000065!3.59e-07!53;UBERON:0001737!7.69e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;4.58e-09;3!UBERON:0001782;4.58e-09;3!UBERON:0000072;9.69e-08;37!UBERON:0000998;2.91e-07;1!UBERON:0007195;2.91e-07;1!UBERON:0006868;2.91e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,6.22e-09,3;UBERON:0005424,6.22e-09,3;UBERON:0000998,2.35e-07,1;UBERON:0006868,2.35e-07,1;UBERON:0007195,2.83e-07,1;UBERON:0008947,5.27e-07,38;UBERON:0003258,5.27e-07,38;UBERON:0001781,6.65e-07,4 | |||
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| ||
|short_description=p3@AK123518 | |short_description=p3@AK123518 | ||
}} | }} |
Latest revision as of 22:39, 27 July 2015
Short description: | p3@AK123518 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AK123518_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_AK123518_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.00e-11 | 19 |
retinal pigment epithelial cell | 6.22e-09 | 3 |
duct epithelial cell | 6.47e-09 | 3 |
branched duct epithelial cell | 6.47e-09 | 3 |
tracheal epithelial cell | 6.47e-09 | 3 |
tracheoblast | 6.47e-09 | 3 |
lung fibroblast | 8.00e-08 | 1 |
perirenal preadipocyte | 1.95e-07 | 1 |
visual pigment cell | 6.65e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 6.22e-09 | 3 |
presumptive retinal pigmented epithelium | 6.22e-09 | 3 |
seminal vesicle | 2.35e-07 | 1 |
seminal fluid secreting gland | 2.35e-07 | 1 |
stroma of bone marrow | 2.83e-07 | 1 |
respiratory primordium | 5.27e-07 | 38 |
endoderm of foregut | 5.27e-07 | 38 |
layer of retina | 6.65e-07 | 4 |