FFCP PHASE1:Hg19::chr1:156677222..156677267,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:156677222..156677267,- | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_at_chr1:156677222..156677267,- | |description=CAGE_peak_at_chr1:156677222..156677267,- | ||
|id=chr1:156677222..156677267,- | |id=chr1:156677222..156677267,- | ||
|ontology_enrichment_celltype=CL:0000055!2.54e-13!180;CL:0000188!1.48e-11!9;CL:0000057!7.16e-11!75;CL:0002570!9.29e-11!8;CL:0002322!2.98e-10!5 | |ontology_enrichment_celltype=CL:0000055!2.54e-13!180;CL:0000188!1.48e-11!9;CL:0000057!7.16e-11!75;CL:0002570!9.29e-11!8;CL:0002322!2.98e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.36e-40;5!CL:0002367;1.56e-16;2!CL:0002321;2.10e-13;15!CL:0000540;1.34e-12;6!CL:0000404;1.34e-12;6!CL:0000594;1.43e-11;3!CL:0000148;7.33e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.39e-40,5;CL:0002367,2.33e-16,2;CL:0000540,1.31e-12,6;CL:0000031,1.31e-12,6;CL:0000404,1.31e-12,6;CL:0000594,1.36e-11,3;CL:0000047,1.38e-09,8;CL:0000148,6.44e-08,10;CL:0000541,6.44e-08,10;CL:0000133,1.94e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;1.34e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;1.56e-16;2!UBERON:0003956;1.56e-16;2!UBERON:0000019;6.11e-07;19!UBERON:0000047;6.11e-07;19!UBERON:0004088;6.11e-07;19!UBERON:0010230;6.11e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,2.33e-16,2;UBERON:0003956,2.33e-16,2 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0,0,0.408308342509787,0.491337269247072,0.413303124703062,0,0,0,0,0,0.625592599359821,0.554128230968366,0,0,0,0,0.538168907066586,0.427114777637135,0.211931901159562,0,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,2.5614478287215,2.38553582978673,2.67246068599892,2.28054321033815,2.77552935963191,4.37972830890996,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,1.07946785661859,0.532685175939381,0.164254312027618,0,0.116210378459959,0.241718899183244,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.616194468458578,0.767518373630648,0.275673144969061,2.47066563197029,1.30515024522806,0.340906509664404,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,1.13841952129715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0,0.859930162358083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25054407851027,2.47570985875021,1.66176135211674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,0,0,0.74627401443437,0.701139929541673,0.554805861502613,0,0,0,0.228840068396924,0,0.932623203496683,0.295710299979268,0,0,0.155262956876259,0,0.53168342911599,0,0,0,0,0,0,0,0,0,0.686791410365586,1.01024846629776,0,0.192619830407303,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0.920529751259204,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,5.3724627989127,1.16241425368125,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0.788857810965923,0,0.436350690340377,0,0.743990036333503,0,0.865253124247578,1.89249637252618,2.513108155165,24.4528106952073,0,3.74104367371785,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0.342233301085281,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0,0,0.408308342509787,0.491337269247072,0.413303124703062,0,0,0,0,0,0.625592599359821,0.554128230968366,0,0,0,0,0.538168907066586,0.427114777637135,0.211931901159562,0,0.103052529238439,0,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0,0,0.339121184620975,0,0,0,2.5614478287215,2.38553582978673,2.67246068599892,2.28054321033815,2.77552935963191,4.37972830890996,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0.845302752556,0.26593811658487,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434418072340414,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,1.07946785661859,0.532685175939381,0.164254312027618,0,0.116210378459959,0.241718899183244,0,0,0.229628896329213,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.616194468458578,0.767518373630648,0.275673144969061,2.47066563197029,1.30515024522806,0.340906509664404,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0.329294892959902,1.13841952129715,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,1.19472429772959,0,0,0,0,0,0,0.859930162358083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25054407851027,2.47570985875021,1.66176135211674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.276697269872462,0,0,0,0,0,0,0.74627401443437,0.701139929541673,0.554805861502613,0,0,0,0.228840068396924,0,0.932623203496683,0.295710299979268,0,0,0.155262956876259,0,0.53168342911599,0,0,0,0,0,0,0,0,0,0.686791410365586,1.01024846629776,0,0.192619830407303,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0.327130788511688,0,0,0,0,0,0,0,0.920529751259204,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,5.3724627989127,1.16241425368125,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0.788857810965923,0,0.436350690340377,0,0.743990036333503,0,0.865253124247578,1.89249637252618,2.513108155165,24.4528106952073,0,3.74104367371785,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0.342233301085281,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p@chr1:156677222..156677267,- | |short_description=p@chr1:156677222..156677267,- | ||
}} | }} |
Latest revision as of 22:42, 27 July 2015
Short description: | p@chr1:156677222..156677267, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:156677222..156677267, - |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.39e-40 | 5 |
trabecular meshwork cell | 2.33e-16 | 2 |
neuron | 1.31e-12 | 6 |
neuroblast | 1.31e-12 | 6 |
electrically signaling cell | 1.31e-12 | 6 |
skeletal muscle satellite cell | 1.36e-11 | 3 |
neuronal stem cell | 1.38e-09 | 8 |
melanocyte | 6.44e-08 | 10 |
melanoblast | 6.44e-08 | 10 |
neurectodermal cell | 1.94e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 2.33e-16 | 2 |
aqueous drainage system | 2.33e-16 | 2 |